FC868797
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_ACIF2 (Serine hydroxymethyltransferase OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=glyA PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.591e-32 Identity = 74/155 (47.74%), Postives = 95/155 (61.29%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYD 693 DP + D + E RQ +ELI SEN+ S VM A GSV+TNKY+EGYPG RYYGG EY+D+AE L RALE F + NVQ+ SGS +N VY ++L+P D+IM + L HGGHL+HG K++ F+ Y + G IDYD Sbjct: 12 DPVLWDAMRKEARRQEDHVELIASENYASPMVMAAQGSVLTNKYAEGYPGKRYYGGCEYVDIAEQLAMDRALELFGAE----HANVQAHSGSQANQAVYLSVLQPGDKIMGMSLAHGGHLTHG-----AKVNVSGKLFQVAAYGVRAEDGRIDYD 157
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_XANAC (Serine hydroxymethyltransferase OS=Xanthomonas axonopodis pv. citri GN=glyA PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 8.608e-32 Identity = 77/160 (48.12%), Postives = 98/160 (61.25%), Query Frame = 1 Query: 217 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 LE DPE+A I E RQ +ELI SEN+ S VM+A GS +TNKY+EGYPG RYYGG E++D+AE L +R + F D NVQ SGS +N VY ALL+P D I+ + L HGGHL+HG K++ F + Y +NE G IDYD+ Sbjct: 8 LETYDPELAKAIAAEAGRQEDHVELIASENYCSPLVMEAQGSQLTNKYAEGYPGKRYYGGCEFVDIAEQLAIERIKQVFGAD----YANVQPHSGSQANQAVYLALLQPGDTILGMSLAHGGHLTHG-----AKVNVSGKLFNAVQYGVNEQ-GLIDYDE 157
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_SYNPW (Serine hydroxymethyltransferase OS=Synechococcus sp. (strain WH7803) GN=glyA PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 8.608e-32 Identity = 77/163 (47.24%), Postives = 101/163 (61.96%), Query Frame = 1 Query: 205 LNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYD 693 +NAPL DP IA +I+ E+ RQ LELI SENF S +VM A GSV+TNKY+EG P RYYGG E++D E L +RA E F W NVQ SG+ +NF V+ ALL+P D IM LDL HGGHL+HG ++ +F + Y +++ T +D + Sbjct: 9 INAPLAESDPAIARLIDQERDRQETHLELIASENFASSAVMAAQGSVLTNKYAEGLPNKRYYGGCEHVDAIEDLAIERAKELF---GAAW-ANVQPHSGAQANFAVFLALLQPGDTIMGLDLSHGGHLTHG-----SPVNVSGKWFNVVQYGVDKETQRLDME 162
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_SHEAM (Serine hydroxymethyltransferase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=glyA PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 8.608e-32 Identity = 75/156 (48.08%), Postives = 99/156 (63.46%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 DPE+ IE E RQ + +ELI SEN+TS VMQA GS +TNKY+EGYPG RYYGG EY+D+ E+L +RA E F NVQ SGS +N VY LL+P D ++ ++L HGGHL+HG ++ + +PY ++E TG IDYD+ Sbjct: 12 DPELFKAIEDETLRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVETLAIERAKELFGAT----FANVQPHSGSQANSAVYMTLLQPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLYNIIPYGIDE-TGKIDYDE 157
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_THEFY (Serine hydroxymethyltransferase OS=Thermobifida fusca (strain YX) GN=glyA PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.124e-31 Identity = 75/164 (45.73%), Postives = 100/164 (60.98%), Query Frame = 1 Query: 205 LNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 L L +DPE+A ++ E ARQ LE+I SENF +V++A G+V+TNKY+EGYPG RYYGG E++D+ E L RA F + NVQ SG+ +N VY ALL+P D I+ LDL HGGHL+HG +I+ + Y + ES G IDYD+ Sbjct: 8 LTQSLAQLDPEVAAAVDAELARQRDTLEMIASENFAPRAVLEAQGTVLTNKYAEGYPGRRYYGGCEHVDVIEQLAIDRAKALFGAE----HANVQPHSGAQANTAVYFALLQPGDTILGLDLAHGGHLTHG-----MRINYSGKILNAVAYHVRESDGLIDYDE 162
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_PORGI (Serine hydroxymethyltransferase OS=Porphyromonas gingivalis GN=glyA PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.124e-31 Identity = 74/155 (47.74%), Postives = 95/155 (61.29%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYD 693 D I D+IE E RQ KG+ELI SENF S VMQA+GS MTNKY+EGYPG RYYGG E +D +E + R + + + W NVQ SG+ +N V A L+ D M L+L HGGHLSHG +++ I + + Y L+E TG +DYD Sbjct: 4 DSVIFDLIEKEHQRQLKGIELIASENFVSEQVMQAMGSCMTNKYAEGYPGKRYYGGCEVVDQSEQIAIDRIKQLYGAE---W-ANVQPHSGAQANMAVLLACLEAGDTFMGLNLEHGGHLSHG-----SLVNSSGILYRPIGYNLSEETGMVDYD 149
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_PORG3 (Serine hydroxymethyltransferase OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=glyA PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.124e-31 Identity = 74/155 (47.74%), Postives = 95/155 (61.29%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYD 693 D I D+IE E RQ KG+ELI SENF S VMQA+GS MTNKY+EGYPG RYYGG E +D +E + R + + + W NVQ SG+ +N V A L+ D M L+L HGGHLSHG +++ I + + Y L+E TG +DYD Sbjct: 4 DSVIFDLIEKEHQRQLKGIELIASENFVSEQVMQAMGSCMTNKYAEGYPGKRYYGGCEVVDQSEQIAIDRIKQLYGAE---W-ANVQPHSGAQANMAVLLACLEAGDTFMGLNLEHGGHLSHG-----SLVNSSGILYRPIGYNLSEETGMVDYD 149
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_PHOLL (Serine hydroxymethyltransferase OS=Photorhabdus luminescens subsp. laumondii GN=glyA PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.124e-31 Identity = 76/155 (49.03%), Postives = 97/155 (62.58%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYD 693 DPE+ +E E RQ + +ELI SEN+TS VMQA GS +TNKY+EGYPG RYYGG EY+D+ E L RA F D NVQ SGS +N VY ALL+P D I+ ++L HGGHL+HG ++ + +PY ++ES G IDYD Sbjct: 12 DPELWQAMEQEVVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKALFGAD----YANVQPHSGSQANAAVYMALLQPGDTILGMNLAHGGHLTHG-----SPVNFSGKLYNVVPYGIDES-GKIDYD 156
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_PETMO (Serine hydroxymethyltransferase OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=glyA PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.124e-31 Identity = 74/160 (46.25%), Postives = 98/160 (61.25%), Query Frame = 1 Query: 217 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 L+ D E+ +I++ E RQ GLELI SEN+ S SVM+A GS+ TNKY+EGYP RYYGG EYID E+L + RA E F NVQ SGS +N Y AL+KP D +M + L HGGHL+HG ++ + F + Y ++E T I+YD+ Sbjct: 5 LKSSDNEVYEILQKELKRQEYGLELIASENYASKSVMEAAGSIFTNKYAEGYPKRRYYGGCEYIDEVETLARDRAKELFNAK----FANVQPHSGSQANMGAYLALMKPGDTLMGMSLSHGGHLTHG-----APVNFSGMLFNVVSYGVDEETETINYDE 155
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_ELUMP (Serine hydroxymethyltransferase OS=Elusimicrobium minutum (strain Pei191) GN=glyA PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.124e-31 Identity = 70/160 (43.75%), Postives = 101/160 (63.12%), Query Frame = 1 Query: 217 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 L+ D + D +E E RQ LELI SENFTS+SVM+A GS++TNKY+EGYPG RYYGG E++DM E+L +RA + F + NVQ SG+ +N Y AL+ P D ++ L+L HGGHL+HG+ ++ +F+ +P + + IDY++ Sbjct: 5 LQKTDKAVFDAVEKELGRQRTKLELIASENFTSLSVMEAQGSILTNKYAEGYPGKRYYGGCEFVDMVETLAIERAKQIFGAE----HANVQPHSGAQANMAAYLALINPGDTVLGLNLSHGGHLTHGH-----PMNFSGKYFKIVPMNVRKEDEQIDYEE 155 The following BLAST results are available for this feature:
BLAST of FC868797 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868797 ID=FC868797; Name=FC868797; organism=Citrus clementina; type=EST; length=697bpback to top |