FC868797
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA1_AGRT5 (Serine hydroxymethyltransferase 1 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=glyA1 PE=3 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 1.374e-29 Identity = 72/161 (44.72%), Postives = 97/161 (60.25%), Query Frame = 1 Query: 214 PLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 PL VDP+I IE E RQ +ELI SEN S +V++A GS+MTNKY+EGYPG RYYGG +++D+AE L +RA + F ++ NVQ SGS N V+ ALL+P D M LDL GGHL+HG ++ +F + Y + E +D D+ Sbjct: 11 PLAEVDPDIFGAIEKELGRQRHEIELIASENIVSRAVLEAQGSIMTNKYAEGYPGKRYYGGCQFVDIAEELAIERAKKLFGVN----FANVQPNSGSQMNQAVFLALLQPGDTFMGLDLNSGGHLTHG-----SPVNMSGKWFNVVSYGVREGDNLLDMDE 162
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_RICFE (Serine hydroxymethyltransferase OS=Rickettsia felis GN=glyA PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.795e-29 Identity = 73/163 (44.79%), Postives = 98/163 (60.12%), Query Frame = 1 Query: 208 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 N L D EI +II+HEK RQ +ELI SENF S +V++A GS++TNKY+EGY G R+Y G E +D AE+L +R + F NVQS SGS +N VY ALL+P D I+ + L GGHL+HG + +F + Y +N+ T IDYD+ Sbjct: 5 NNHLHETDKEIDEIIKHEKLRQNSVIELIASENFVSPAVLEAQGSILTNKYAEGYSGKRFYNGCEEVDKAENLAIERVKKLFNCK----YANVQSHSGSQANQAVYLALLQPGDTILGMSLDSGGHLTHGAAPNMS-----GKWFNAVSYSVNKETYLIDYDE 158
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_PROMP (Serine hydroxymethyltransferase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=glyA PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.795e-29 Identity = 71/160 (44.38%), Postives = 102/160 (63.75%), Query Frame = 1 Query: 217 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 L+ DP I+++I EK RQ LELI SENF S++VMQA GSV+TNKY+EG P RYYGG E++D E L +RA + F D W NVQ SG+ +N V+ +LLKP D I+ +DL HGGHL+HG ++ +F + Y +++ T +++++ Sbjct: 7 LKESDPIISNLINSEKNRQETHLELIASENFASMAVMQAQGSVLTNKYAEGLPQKRYYGGCEFVDEIEELAIERAKQLFDAD---W-ANVQPHSGAQANAAVFLSLLKPGDTILGMDLSHGGHLTHG-----SPVNMSGKWFNAVHYGVDKETNKLNFNE 157
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_PASMU (Serine hydroxymethyltransferase OS=Pasteurella multocida GN=glyA PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.795e-29 Identity = 73/155 (47.10%), Postives = 92/155 (59.35%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYD 693 DP + I+ E RQ + +ELI SEN+ S VM+A GS TNKY+EGYPG RYYGG EY D+ E L RA E F D VNVQ SGS +N VY ALL+PHD I+ + L HGGHL+HG +S + + Y + + G IDY+ Sbjct: 12 DPVLWQAIQDENRRQEEHIELIASENYASPRVMEAQGSQFTNKYAEGYPGKRYYGGCEYADIVEQLAIDRAKELFHAD----YVNVQPHSGSQANAAVYGALLQPHDTILGMSLAHGGHLTHG-----ASVSFSGKIYNAVQYGIT-AEGLIDYE 156
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_MOOTA (Serine hydroxymethyltransferase OS=Moorella thermoacetica (strain ATCC 39073) GN=glyA PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.795e-29 Identity = 71/156 (45.51%), Postives = 94/156 (60.26%), Query Frame = 1 Query: 226 VDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYD 693 VDPEI + E RQ LELI SENF S +VM+A V+TNKY+EGYPG RYYGG E+ D+ E+L ++RA F + NVQ SGS +N VY A+L P D+ + ++L HGGHL+HG +S ++ Y ++ TG IDYD Sbjct: 9 VDPEIVAAVRGELQRQRTHLELIASENFVSQAVMEAYSCVLTNKYAEGYPGKRYYGGCEWADVVENLARERAKALFGAE----HANVQPHSGSQANTAVYLAVLNPGDKALGMNLAHGGHLTHG-----SPVSLSGKYYNFCFYGVDAKTGRIDYD 155
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_KOSOT (Serine hydroxymethyltransferase OS=Kosmotoga olearia (strain TBF 19.5.1) GN=glyA PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.795e-29 Identity = 68/156 (43.59%), Postives = 94/156 (60.26%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 DPE+ +I+ E RQ +GLELI SENF S +VM+A+GS +TNKY+EGYP RYYGG +++D AE L ++R + F NVQ SGS +N Y A+ P D IM + L HGGHL+HG ++ F + Y ++ T +DYD+ Sbjct: 9 DPEVYEIVMKELGRQEEGLELIASENFVSPAVMEAMGSTLTNKYAEGYPRRRYYGGCKFVDEAEQLARERVKKLFNCK----YANVQPHSGSQANMAAYLAVANPGDTIMGMSLSHGGHLTHG-----SPVNFSGKLFNIVSYGVDLETEVLDYDE 155
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_HELPJ (Serine hydroxymethyltransferase OS=Helicobacter pylori J99 GN=glyA PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.795e-29 Identity = 74/160 (46.25%), Postives = 100/160 (62.50%), Query Frame = 1 Query: 217 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 LE D EI + I E RQ + LE+I SEN+T SVM+A+GS++TNKY+EGYP RYYGG E +D ESL +RA + F NVQ+ SGS +N VY ALLK +D+I+ +DL GGHL+HG K+S +++ Y + GYIDY++ Sbjct: 5 LEQTDSEIFEFIVEEFKRQNEHLEMIASENYTFPSVMEAMGSILTNKYAEGYPNKRYYGGCEVVDKIESLAIERAKKLFNCQ----FANVQAHSGSQANNAVYHALLKLYDKILGMDLSCGGHLTHG-----AKVSLTGKHYQSFSYGVG-LDGYIDYEE 154
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_FLAPJ (Serine hydroxymethyltransferase OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=glyA PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.795e-29 Identity = 71/156 (45.51%), Postives = 93/156 (59.62%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 D +I D+I E+ RQ GLELI SENF S VM+A GSV+TNKY+EGYPG RYYGG E +D+ E + RA + F + NVQ SGS +N V+ A LKP D I+ DL HGGHL+HG ++ + Y + TG ++YD+ Sbjct: 4 DQQIFDLIIEEQDRQIHGLELIASENFVSDQVMEAAGSVLTNKYAEGYPGKRYYGGCEVVDVIEQIAIDRAKDLFGAE----YANVQPHSGSQANTAVFAACLKPGDTILGFDLSHGGHLTHG-----SPVNFSGKLYNPTFYGVEPETGMLNYDK 150
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_BACA2 (Serine hydroxymethyltransferase OS=Bacillus amyloliquefaciens (strain FZB42) GN=glyA PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.795e-29 Identity = 66/159 (41.51%), Postives = 101/159 (63.52%), Query Frame = 1 Query: 217 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYD 693 L V D ++ + I+ E+ RQ +ELI SENF + +VM+A GSV+TNKY+EGYPG RYYGG E++D+ E + + RA E F + VNVQ SG+ +N VY +L+ D ++ ++L HGGHL+HG ++ + + + Y +++ T YIDY+ Sbjct: 4 LPVQDKQVFNAIKDERKRQQTKIELIASENFVTEAVMEAQGSVLTNKYAEGYPGKRYYGGCEHVDVVEDIARDRAKEIFGAE----HVNVQPHSGAQANMAVYFTILEHGDTVLGMNLSHGGHLTHG-----SPVNFSGVQYNFVEYGVDKDTQYIDYE 153
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_AZOVD (Serine hydroxymethyltransferase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=glyA PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.795e-29 Identity = 69/156 (44.23%), Postives = 97/156 (62.18%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 D E+ ++ E RQ +ELI SEN+TS +VM+A GSV+TNKY+EGYPG RYYGG EY+D+ E L RA + F D NVQ +GS +N VY AL+KP D ++ + L HGGHL+HG ++ + + Y + ++ G+IDYD+ Sbjct: 12 DAELFAAMKQEAQRQEDHIELIASENYTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKQLFGAD----YANVQPHAGSQANAAVYQALVKPGDTVLGMSLAHGGHLTHG-----ASVNFSGKMYNAVQYGI-DANGFIDYDE 157 The following BLAST results are available for this feature:
BLAST of FC868797 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868797 ID=FC868797; Name=FC868797; organism=Citrus clementina; type=EST; length=697bpback to top |