FC868797
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_ACHLI (Serine hydroxymethyltransferase OS=Acholeplasma laidlawii (strain PG-8A) GN=glyA PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.795e-29 Identity = 71/160 (44.38%), Postives = 98/160 (61.25%), Query Frame = 1 Query: 217 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 L+ D E+ + I+ E RQ + +ELI SENF S +V++A GS++TNKY+EGYP RYYGG E++D E L Q R + F VNVQ SGS +N VY ALL P DR++ +DL GGHL+HGY K+S ++E Y ++ IDY++ Sbjct: 3 LKDYDLELFNAIQREDNRQKEHIELIASENFVSDAVLEAQGSILTNKYAEGYPNKRYYGGCEFVDQVEILAQDRLKQIFNAK----FVNVQPHSGSQANAAVYQALLSPGDRVLGMDLNAGGHLTHGY-----KLSFSGHYYEAHAYGVSRFDERIDYEE 153
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA3_PSEPF (Serine hydroxymethyltransferase 3 OS=Pseudomonas fluorescens (strain Pf0-1) GN=glyA3 PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.795e-29 Identity = 71/156 (45.51%), Postives = 95/156 (60.90%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 D + + E+ RQ +ELI SEN+TS VMQA GS +TNKY+EGYPG RYYGG E++D E+L +RA + F D NVQ SGS +N VY ALL+ D I+ + L HGGHL+HG K+S+ + + Y ++ TG IDYD+ Sbjct: 12 DDALLAAMNAEEQRQEDHIELIASENYTSKRVMQAQGSGLTNKYAEGYPGKRYYGGCEHVDKVEALAIERAKQLFGAD----YANVQPHSGSSANSAVYLALLQAGDTILGMSLAHGGHLTHG-----AKVSSSGKLYNAVQYGIDTKTGLIDYDE 158
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA1_PSEPK (Serine hydroxymethyltransferase 1 OS=Pseudomonas putida (strain KT2440) GN=glyA1 PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.795e-29 Identity = 71/156 (45.51%), Postives = 96/156 (61.54%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 D + + E+ RQ +ELI SEN+TS VMQA GS +TNKY+EGYPG RYYGG E++D E+L +RA + F D NVQ SGS +N VY ALL+ D I+ + L HGGHL+HG K+S+ + + Y ++ +TG IDYD+ Sbjct: 12 DDALLAAMNAEEQRQEDHIELIASENYTSKRVMQAQGSGLTNKYAEGYPGKRYYGGCEHVDKVEALAIERAKQLFGAD----YANVQPHSGSSANGAVYLALLQAGDTILGMSLAHGGHLTHG-----AKVSSSGKLYNAVQYGIDTNTGLIDYDE 158
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_TERTT (Serine hydroxymethyltransferase OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=glyA PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.344e-29 Identity = 70/156 (44.87%), Postives = 91/156 (58.33%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 DP++ I E RQ + +ELI SEN+TS VM A GS +TNKY+EGYP RYYGG EY+D E L +RA F D NVQ SGS +N VY AL P D ++ + L HGGHL+HG K++ + + Y LN TG +DY++ Sbjct: 12 DPDVWQAIVDEGVRQEEHIELIASENYTSPLVMVAQGSKLTNKYAEGYPSKRYYGGCEYVDKVEELAIERAKALFGAD----YANVQPHSGSQANSAVYAALCAPGDTVLGMSLDHGGHLTHG-----AKVNFSGKMYNAVQYGLNPETGLVDYEE 158
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_PSEU5 (Serine hydroxymethyltransferase OS=Pseudomonas stutzeri (strain A1501) GN=glyA PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.344e-29 Identity = 71/156 (45.51%), Postives = 95/156 (60.90%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 D ++ ++ E RQ +ELI SEN+TS +VM+A GSV+TNKY+EGYPG RYYGG EY+D+ E L RA E F D NVQ +GS +N VY ALL D I+ + L HGGHL+HG +S+ + + Y +N+ G IDYD+ Sbjct: 12 DADLFAAMQQEAKRQEDHIELIASENYTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAD----YANVQPHAGSQANAAVYLALLSAGDTILGMSLAHGGHLTHG-----ASVSSSGKLYNAVQYGINDQ-GLIDYDE 157
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_PSEHT (Serine hydroxymethyltransferase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=glyA PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.344e-29 Identity = 71/156 (45.51%), Postives = 94/156 (60.26%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 DPE+ D I E ARQ +ELI SEN+ S V++A GS +TNKY+EGYPG RYYGG E++D+ E L RA E F D NVQ +GS +N V+ ALL D ++ + L HGGHL+HG ++ + + Y L+E+TG IDY Q Sbjct: 12 DPELFDAIAKETARQEDHIELIASENYCSPRVLEAQGSQLTNKYAEGYPGKRYYGGCEHVDVVEQLAIDRANELFGSD----YANVQPHAGSQANAAVFLALLNAGDTVLGMSLAHGGHLTHG-----SHVNFSGKLYNAIQYGLDETTGEIDYAQ 158
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_PERMH (Serine hydroxymethyltransferase OS=Persephonella marina (strain DSM 14350 / EX-H1) GN=glyA PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.344e-29 Identity = 71/160 (44.38%), Postives = 97/160 (60.62%), Query Frame = 1 Query: 217 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 L+ VD E+ + + E RQ + LE+I SEN+TS +VM+A GSV+TNKY+EG P RYYGG EY+D+ E L +R + + + NVQ SGS +N VY + L+ D IM + L HGGHL+HG K++ I F + Y +N T IDYDQ Sbjct: 5 LKQVDQEVFEAVSKEFKRQQEHLEMIASENYTSYAVMEAQGSVLTNKYAEGLPHKRYYGGCEYVDIVEDLAIERLKKIYGAE----HANVQPHSGSQANQAVYFSQLQAGDTIMGMSLAHGGHLTHG-----AKVNLSGIVFNAVQYGVNPETELIDYDQ 155
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_NITEU (Serine hydroxymethyltransferase OS=Nitrosomonas europaea GN=glyA PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.344e-29 Identity = 70/158 (44.30%), Postives = 94/158 (59.49%), Query Frame = 1 Query: 217 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDY 690 +E VDP++ I+ E RQ +ELI SEN+ S +V+QA G+V+TNKY+EGYPG RYYGG Y+D+ E L R F + VNVQ SGS +N VY + LKP D ++ + L HGGHL+HG ++ F ++ Y LN T IDY Sbjct: 8 IEQVDPDLWQAIKGEVQRQEDHIELIASENYASPAVLQAQGTVLTNKYAEGYPGKRYYGGCRYVDIVEQLAIDRLRNLFNAE----YVNVQPHSGSQANAAVYLSALKPGDTLLGMSLAHGGHLTHG-----SAVNMSGKIFNSISYGLNPETEEIDY 156
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_MANSM (Serine hydroxymethyltransferase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=glyA PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.344e-29 Identity = 73/162 (45.06%), Postives = 98/162 (60.49%), Query Frame = 1 Query: 208 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYD 693 N + DP + D I++E RQ + +ELI SEN+ + +VM+A GS +TNKY+EGYPG RYYGG EY+D+ E L RA E F D NVQ SGS +N VY ALL D I+ +DL HGGHL+HG K+S + ++ Y + + G IDY+ Sbjct: 4 NHSIAEFDPVLWDAIQNENRRQEEHIELIASENYVTKAVMEAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGAD----YANVQPHSGSQANAAVYGALLNAGDTILGMDLAHGGHLTHG-----AKVSFSGKIYNSVLYGIT-AEGLIDYE 155
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_HALOH (Serine hydroxymethyltransferase OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=glyA PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.344e-29 Identity = 72/160 (45.00%), Postives = 95/160 (59.38%), Query Frame = 1 Query: 217 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 L+ VDP+I +IE E RQ + +ELI SENF S +VM+A GS +TNKY+EGYP RYYGG E +D E L RA E F + VNVQ SGS +N VY A + P I+A+DL HGGHL+HG ++ ++ + Y + ID+DQ Sbjct: 4 LKKVDPDIFGLIEEEDQRQRRNIELIASENFVSDAVMEAAGSCLTNKYAEGYPHKRYYGGCEVVDKVEELAIARARELFGAE----HVNVQPHSGSQANQAVYFATVPPGGTILAMDLTHGGHLTHG-----SPVNMSGKYYNFIHYGVTREEEVIDFDQ 154 The following BLAST results are available for this feature:
BLAST of FC868797 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868797 ID=FC868797; Name=FC868797; organism=Citrus clementina; type=EST; length=697bpback to top |