FC868797
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_CORJK (Serine hydroxymethyltransferase OS=Corynebacterium jeikeium (strain K411) GN=glyA PE=3 SV=2) HSP 1 Score: 129.028 bits (323), Expect = 2.344e-29 Identity = 70/166 (42.17%), Postives = 99/166 (59.64%), Query Frame = 1 Query: 199 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 +Q N PL +DP++A+ I E RQ LE+I SENF +V+QA GSV+TNKY+EGYPG RYYGG E++D+ E L + RA + F + NVQ +G+ +N V +L P D+IM L L HGGHL+HG ++ +E Y ++ T +D D+ Sbjct: 13 QQHNTPLAELDPQVAEAIAGELRRQRTTLEMIASENFVPRAVLQAQGSVLTNKYAEGYPGRRYYGGCEHVDVIEDLARDRAKQVFGAE----FANVQPHAGAQANAAVLMSLANPGDKIMGLSLAHGGHLTHGMH-----LNFSGKLYEVAAYEVDPETFRLDMDK 169
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_CLOTH (Serine hydroxymethyltransferase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=glyA PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.344e-29 Identity = 67/157 (42.68%), Postives = 99/157 (63.06%), Query Frame = 1 Query: 226 VDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 +DPE+A IE E RQ +ELI SENF S +V++A+G+ +TNKY+EGYPG RYYGG E++D+ E+L +RA + F + NVQ SG+ +N V+ A+L P D I+ ++L HGGHLSHG ++ ++ + Y + + IDYD+ Sbjct: 10 IDPEVAKAIELEVNRQRNKIELIASENFVSKAVIEAMGTPLTNKYAEGYPGKRYYGGCEFVDIIENLAIERAKKIFGAE----HANVQPHSGAQANMAVFFAVLNPGDTILGMNLSHGGHLSHG-----SPVNMSGKYYNVISYGVRKEDCRIDYDE 157
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_CLONN (Serine hydroxymethyltransferase OS=Clostridium novyi (strain NT) GN=glyA PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.344e-29 Identity = 72/160 (45.00%), Postives = 98/160 (61.25%), Query Frame = 1 Query: 217 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 L + D EI +II+ E RQ +ELI SENF S SVM+A+GS +TNKY+EGYP RYYGG E +D ESL +R + F + NVQ SGS +N VY ++L+P D IM ++L HGGHL+HG ++ F + Y +N+ T I+YD+ Sbjct: 6 LALTDKEIFNIIQLENNRQNNTIELIASENFASKSVMEAMGSQLTNKYAEGYPSKRYYGGCEEVDKIESLAIERLKKIFGCE----HANVQPHSGSQANMAVYLSVLEPGDTIMGMNLSHGGHLTHG-----SPVNFSGRLFNFVAYGVNKETELINYDE 156
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_CAMC5 (Serine hydroxymethyltransferase OS=Campylobacter curvus (strain 525.92) GN=glyA PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.344e-29 Identity = 73/160 (45.62%), Postives = 98/160 (61.25%), Query Frame = 1 Query: 217 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 L+ D EI D++ E RQ LE+I SENFT VM+ +GS++TNKY+EGYPG RYYGG EY+D E L R + F + NVQ SGS +N VY ALL P D+I+ +DL HGGHL+HG K+S+ +E+ Y + E G I+Y++ Sbjct: 3 LQSYDKEIFDLVNLELKRQCDHLEMIASENFTYPEVMEVMGSILTNKYAEGYPGKRYYGGCEYVDGIEQLAIDRCKQLFGCE----FANVQPNSGSQANQGVYGALLNPGDKILGMDLSHGGHLTHG-----AKVSSSGKIYESFFYGV-ELDGRINYER 152
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA2_PSEPF (Serine hydroxymethyltransferase 2 OS=Pseudomonas fluorescens (strain Pf0-1) GN=glyA2 PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.344e-29 Identity = 71/156 (45.51%), Postives = 96/156 (61.54%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 D ++ +E E RQ + +ELI SEN+TS +VM+A GSV+TNKY+EGYPG RYYGG EY+D+ E L RA E F D NVQ +GS +N VY ALL D I+ + L HGGHL+HG +S+ + + Y + ++ G IDYD+ Sbjct: 12 DADLFAAMEQEAQRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAD----YANVQPHAGSQANAAVYLALLSAGDTILGMSLAHGGHLTHG-----ASVSSSGKLYNAIQYGI-DANGLIDYDE 157
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA1_VIBPA (Serine hydroxymethyltransferase 1 OS=Vibrio parahaemolyticus GN=glyA1 PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.344e-29 Identity = 71/156 (45.51%), Postives = 96/156 (61.54%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 D E+ I+ E RQ + +ELI SEN+TS VM+A GS +TNKY+EGYPG RYYGG EY+D AE L RA + F + NVQ SGS +N VY ALL P D ++ + L HGGHL+HG ++ + +PY ++E+ G I+YD+ Sbjct: 12 DAELFAAIQEETLRQEEHIELIASENYTSPRVMEAQGSQLTNKYAEGYPGKRYYGGCEYVDKAEQLAIDRACKLFGCE----YANVQPHSGSQANSAVYMALLNPGDTVLGMSLAHGGHLTHG-----SPVNFSGKHYNVIPYGIDEA-GQINYDE 157
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_SHEWM (Serine hydroxymethyltransferase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=glyA PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.061e-29 Identity = 69/154 (44.81%), Postives = 96/154 (62.34%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDY 690 DP++ I+ E RQ + +ELI SEN+TS V++A GS +TNKY+EGYPG RYYGG E++D+AE L RA E F NVQ SGS +N V+ ALL+ D ++ + L HGGHL+HG +S + ++ Y ++E+TG IDY Sbjct: 12 DPQLFQAIQDETRRQEEHIELIASENYTSPRVLEAQGSQLTNKYAEGYPGKRYYGGCEHVDIAEELAISRAKELFGAT----YANVQPHSGSQANAAVFMALLEGGDTVLGMSLAHGGHLTHG-----SHVSFSGKLYNSVQYGIDETTGKIDY 156
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_RHOPB (Serine hydroxymethyltransferase OS=Rhodopseudomonas palustris (strain BisB18) GN=glyA PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.061e-29 Identity = 75/163 (46.01%), Postives = 97/163 (59.51%), Query Frame = 1 Query: 208 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 +A + DPEIA I E RQ +ELI SEN S +VM+A GSVMTNKY+EGYPG RYYGG E++D+AE+L +RA + F NVQ SGS N V+ ALL+P D M LDL GGHL+HG ++ +F+ + Y + G ID D+ Sbjct: 23 SATIADADPEIAAAIAGELGRQRHEIELIASENIVSRAVMEAQGSVMTNKYAEGYPGHRYYGGCEFVDVAENLAIERAKKLFGAG----FANVQPNSGSQMNQAVFLALLQPGDTFMGLDLAAGGHLTHG-----SSVNMSGKWFKPVHYGVRREDGIIDMDE 176
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_LACLA (Serine hydroxymethyltransferase OS=Lactococcus lactis subsp. lactis GN=glyA PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.061e-29 Identity = 70/159 (44.03%), Postives = 95/159 (59.75%), Query Frame = 1 Query: 220 EVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 E DPE+ I E+ RQ + +ELI SEN S +VM A GSV+TNKY+EGYPG RYYGG E +D+ E+L +RA E F NVQ SGS +N Y AL++P D ++ +DL GGHL+HG ++ + +PY +N T +DYD+ Sbjct: 9 ESFDPELWAAIHAEEIRQQQNIELIASENIVSKAVMAAQGSVLTNKYAEGYPGKRYYGGTEAVDVVENLAIERAKELFGAK----FANVQPHSGSQANAAAYMALIQPGDTVLGMDLNAGGHLTHG-----ASVNFSGKTYHFVPYGVNSETELLDYDE 158
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_KINRD (Serine hydroxymethyltransferase OS=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) GN=glyA PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.061e-29 Identity = 71/160 (44.38%), Postives = 97/160 (60.62%), Query Frame = 1 Query: 214 PLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYD 693 PL VDPEIA +++ E RQ LE+I SENF SV++A GSV+TNKY+EGYPG RYYGG E++D+AE L + RA E F + NVQ SG+ +N A ++ D I+ L+L HGGHL+HG KI+ ++ Y ++ T +D D Sbjct: 18 PLSEVDPEIAAVLDAELGRQRDTLEMIASENFAPRSVLEAQGSVLTNKYAEGYPGKRYYGGCEHVDVAEELARTRAKELFGAE----HANVQPHSGASANAAAMHAFIRGGDGILGLELAHGGHLTHG-----MKINFSGRMYDVSSYGVDPQTFRVDMD 168 The following BLAST results are available for this feature:
BLAST of FC868797 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868797 ID=FC868797; Name=FC868797; organism=Citrus clementina; type=EST; length=697bpback to top |