FC868797
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_RHOP5 (Serine hydroxymethyltransferase OS=Rhodopseudomonas palustris (strain BisA53) GN=glyA PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.820e-29 Identity = 75/163 (46.01%), Postives = 96/163 (58.90%), Query Frame = 1 Query: 208 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 +A L DPEIA I E RQ +ELI SEN S +V++A GSVMTNKY+EGYPG RYYGG E++D+AE+L RA + F NVQ SGS N V+ ALL+P D M LDL GGHL+HG ++ +F+ + Y + G ID D+ Sbjct: 16 SASLAEADPEIAAAIAGELGRQRHEIELIASENIVSRAVLEAQGSVMTNKYAEGYPGHRYYGGCEFVDVAENLAIDRAKKLFGAG----FANVQPNSGSQMNQAVFLALLQPGDTFMGLDLAAGGHLTHG-----ATVNMSGKWFKPVHYTVRREDGIIDMDE 169
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_RALEH (Serine hydroxymethyltransferase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=glyA PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.820e-29 Identity = 72/159 (45.28%), Postives = 94/159 (59.12%), Query Frame = 1 Query: 217 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYD 693 ++ +DPE+ I+ E RQ +ELI SEN+TS +VM A GS +TNKY+EGYPG RYYGG EY+D+ E L R + F + NVQ SGS +N VY A+LKP D IM + L GGHL+HG ++ +F + Y LN IDYD Sbjct: 9 IDQIDPEVFAAIQQENQRQEDHIELIASENYTSPAVMAAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRVKQLFGAE----AANVQPNSGSQANQGVYFAVLKPGDTIMGMSLAEGGHLTHG-----MALNMSGKWFNVVSYGLNAQED-IDYD 157
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_NITHX (Serine hydroxymethyltransferase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=glyA PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.820e-29 Identity = 75/162 (46.30%), Postives = 96/162 (59.26%), Query Frame = 1 Query: 211 APLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 A L DPEIA I+ E RQ +ELI SEN S +V++A GSVMTNKY+EGYPGARYYGG E++D+AE+L +RA + F NVQ SGS N V+ ALL+P D M LDL GGHL+HG ++ +F+ Y + ID D+ Sbjct: 17 ATLAEADPEIAAAIKGELGRQRHEIELIASENIVSRAVLEAQGSVMTNKYAEGYPGARYYGGCEWVDVAETLAIERAKKLFGAQ----FANVQPNSGSQMNQAVFLALLQPGDTFMGLDLAAGGHLTHG-----APVNMSGKWFKAAHYTVRRDDHLIDMDE 169
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_MYCPA (Serine hydroxymethyltransferase OS=Mycobacterium paratuberculosis GN=glyA PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.820e-29 Identity = 70/163 (42.94%), Postives = 101/163 (61.96%), Query Frame = 1 Query: 205 LNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYD 693 ++APL +DP+IA ++ E RQ LE+I SENF +V+QA GSV+TNKY+EG PG RYYGG EY+D+ E++ + RA F D NVQ SG+ +N V AL+ P +R++ LDL +GGHL+HG K++ ++ Y ++ +T ID D Sbjct: 1 MSAPLADIDPDIAGLLGQELGRQRDTLEMIASENFVPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEYVDVVENIARDRAKALFDAD----FANVQPHSGAQANAAVLHALMTPGERLLGLDLANGGHLTHG-----MKLNFSGKLYDVGFYGVDPTTHLIDMD 154
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_MYCA1 (Serine hydroxymethyltransferase OS=Mycobacterium avium (strain 104) GN=glyA PE=3 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 6.820e-29 Identity = 70/163 (42.94%), Postives = 101/163 (61.96%), Query Frame = 1 Query: 205 LNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYD 693 ++APL +DP+IA ++ E RQ LE+I SENF +V+QA GSV+TNKY+EG PG RYYGG EY+D+ E++ + RA F D NVQ SG+ +N V AL+ P +R++ LDL +GGHL+HG K++ ++ Y ++ +T ID D Sbjct: 1 MSAPLADIDPDIAGLLGQELGRQRDTLEMIASENFVPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEYVDVVENIARDRAKALFGAD----FANVQPHSGAQANAAVLHALMTPGERLLGLDLANGGHLTHG-----MKLNFSGKLYDVGFYGVDPTTHLIDMD 154
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_LACLS (Serine hydroxymethyltransferase OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=glyA PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.820e-29 Identity = 70/159 (44.03%), Postives = 95/159 (59.75%), Query Frame = 1 Query: 220 EVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 E DPE+ I E+ RQ + +ELI SEN S +VM A GSV+TNKY+EGYPG RYYGG E +D+ E+L RA E F VNVQ SGS +N Y AL++P D ++ +DL GGHL+HG ++ + +PY +N T +DY++ Sbjct: 9 ESFDPELWAAIHAEEIRQQQNIELIASENIVSKAVMAAQGSVLTNKYAEGYPGKRYYGGTEAVDVVENLAIDRAKELFGAK----FVNVQPHSGSQANAAAYMALIQPGDTVLGMDLNAGGHLTHG-----ASVNFSGKTYHFVPYGVNPQTELLDYEE 158
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_DEHSC (Serine hydroxymethyltransferase OS=Dehalococcoides sp. (strain CBDB1) GN=glyA PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.820e-29 Identity = 70/159 (44.03%), Postives = 91/159 (57.23%), Query Frame = 1 Query: 217 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYD 693 L+ DP + + I E R + ++LI SEN+TS +V++A GSV TNKY+EGYPG RYY G EY D E L RA F + NVQ SG+ +N Y A++KP D IM L L HGGHL+HG K++ + + Y LN T IDYD Sbjct: 4 LKTSDPAVYNAIMQETTRLKETIDLIASENYTSKAVLEAQGSVFTNKYAEGYPGKRYYAGCEYADAVEELAIDRAKTLFHAE----HANVQPHSGAQANMAAYFAMVKPGDTIMGLTLSHGGHLTHG-----SKVNFTGKLYHVIEYGLNAETERIDYD 153
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_DEHSB (Serine hydroxymethyltransferase OS=Dehalococcoides sp. (strain BAV1) GN=glyA PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.820e-29 Identity = 70/159 (44.03%), Postives = 91/159 (57.23%), Query Frame = 1 Query: 217 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYD 693 L+ DP + + I E R + ++LI SEN+TS +V++A GSV TNKY+EGYPG RYY G EY D E L RA F + NVQ SG+ +N Y A++KP D IM L L HGGHL+HG K++ + + Y LN T IDYD Sbjct: 4 LKTSDPAVYNAIMQETTRLKETIDLIASENYTSKAVLEAQGSVFTNKYAEGYPGKRYYAGCEYADAVEELAIDRAKTLFHAE----HANVQPHSGAQANMAAYFAMVKPGDTIMGLTLSHGGHLTHG-----SKVNFTGKLYHVIEYGLNAETERIDYD 153
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_CUPTR (Serine hydroxymethyltransferase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=glyA PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.820e-29 Identity = 72/159 (45.28%), Postives = 94/159 (59.12%), Query Frame = 1 Query: 217 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYD 693 ++ +DPE+ I+ E RQ +ELI SEN+TS +VM A GS +TNKY+EGYPG RYYGG EY+D+ E L R + F + NVQ SGS +N VY A+LKP D IM + L GGHL+HG ++ +F + Y LN IDYD Sbjct: 9 IDQIDPEVFAAIQQENQRQEDHIELIASENYTSPAVMAAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRVKQLFGAE----AANVQPNSGSQANQGVYFAVLKPGDTIMGMSLAEGGHLTHG-----MALNMSGKWFNVVSYGLNAQED-IDYD 157
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA1_RHIME (Serine hydroxymethyltransferase 1 OS=Rhizobium meliloti GN=glyA1 PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.820e-29 Identity = 71/156 (45.51%), Postives = 95/156 (60.90%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 DPEI IE E RQ +ELI SEN S +V++A GS+MTNKY+EGYPG RYYGG +Y+D+AE+L +RA + F ++ NVQ SGS N V+ ALL+P D M LDL GGHL+HG ++ +F + Y + E +D D+ Sbjct: 18 DPEIFGAIEKELGRQRHEIELIASENIVSRAVLEAQGSIMTNKYAEGYPGKRYYGGCQYVDIAEALAIERAKKLFGVN----FANVQPNSGSQMNQAVFLALLQPGDTFMGLDLNSGGHLTHG-----SPVNMSGKWFNVVSYGVREDDHLLDMDE 164 The following BLAST results are available for this feature:
BLAST of FC868797 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868797 ID=FC868797; Name=FC868797; organism=Citrus clementina; type=EST; length=697bpback to top |