FC868797
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA1_MYCTU (Serine hydroxymethyltransferase 1 OS=Mycobacterium tuberculosis GN=glyA1 PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 8.908e-29 Identity = 70/163 (42.94%), Postives = 102/163 (62.58%), Query Frame = 1 Query: 205 LNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYD 693 ++APL VDP+IA+++ E RQ LE+I SENF +V+QA GSV+TNKY+EG PG RYYGG E++D+ E+L + RA F + NVQ SG+ +N V AL+ P +R++ LDL +GGHL+HG +++ +E Y ++ +T ID D Sbjct: 1 MSAPLAEVDPDIAELLAKELGRQRDTLEMIASENFVPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKALFGAE----FANVQPHSGAQANAAVLHALMSPGERLLGLDLANGGHLTHG-----MRLNFSGKLYENGFYGVDPATHLIDMD 154
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA1_MYCBO (Serine hydroxymethyltransferase 1 OS=Mycobacterium bovis GN=glyA1 PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 8.908e-29 Identity = 70/163 (42.94%), Postives = 102/163 (62.58%), Query Frame = 1 Query: 205 LNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYD 693 ++APL VDP+IA+++ E RQ LE+I SENF +V+QA GSV+TNKY+EG PG RYYGG E++D+ E+L + RA F + NVQ SG+ +N V AL+ P +R++ LDL +GGHL+HG +++ +E Y ++ +T ID D Sbjct: 1 MSAPLAEVDPDIAELLAKELGRQRDTLEMIASENFAPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKALFGAE----FANVQPHSGAQANAAVLHALMSPGERLLGLDLANGGHLTHG-----MRLNFSGKLYENGFYGVDPATHLIDMD 154
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA1_COLP3 (Serine hydroxymethyltransferase 1 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=glyA1 PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 8.908e-29 Identity = 68/156 (43.59%), Postives = 95/156 (60.90%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 DPE+ + + +E RQ + +ELI SEN+ S V++A GS +TNKY+EGYPG RYYGG EY+D+AE L RA E F NVQ +GS +N V+ AL+ P +++ + L HGGHL+HG +S +E Y L+ TG IDY++ Sbjct: 12 DPELFEAMSNEVVRQEEHIELIASENYCSPRVLEAQGSQLTNKYAEGYPGKRYYGGCEYVDIAEQLAIDRAKELFGAT----YANVQPHAGSQANAAVFQALVTPGGKVLGMSLAHGGHLTHG-----SHVSFSGKSYEAFQYGLHPETGDIDYEE 158
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_XYLFA (Serine hydroxymethyltransferase OS=Xylella fastidiosa GN=glyA PE=3 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 1.163e-28 Identity = 74/162 (45.68%), Postives = 96/162 (59.26%), Query Frame = 1 Query: 208 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYD 693 +A L++ DPE+A I E RQ +ELI SEN+ S VMQ GS +TNKY+EGY G RYYGG E +D+AE L +RA + F D NVQ SGS +N VY ALL+P D I+ + L HGGHL+HG ++ F + Y +N G IDY+ Sbjct: 5 DARLDMYDPELAKAIAAEVMRQEDHVELIASENYCSTLVMQVQGSQLTNKYAEGYSGKRYYGGCECVDIAEQLAIERAKQLFGAD----YANVQPHSGSQANQAVYFALLQPGDTILGMSLAHGGHLTHG-----ANVNVSGKLFNAVQYGVN-GQGLIDYE 156
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_STRMU (Serine hydroxymethyltransferase OS=Streptococcus mutans GN=glyA PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.163e-28 Identity = 69/159 (43.40%), Postives = 95/159 (59.75%), Query Frame = 1 Query: 220 EVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 E D E+ + I E+ RQ +ELI SEN S +VM+A GS++TNKY+EGYPG RYYGG +Y+D+ ESL +RA + F NVQ SGS +N Y AL+KP D +M LDL GGHL+HG +S + + Y ++ T ++Y+Q Sbjct: 9 EEYDREVWEAIHAEEKRQQNNIELIASENVVSKAVMKAQGSILTNKYAEGYPGRRYYGGTDYVDVVESLAIERAKKLFGAK----YANVQPHSGSQANAAAYMALIKPGDTVMGLDLAAGGHLTHG-----SPVSFSGQTYNFIAYNVDPETEVLNYEQ 158
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_STAAW (Serine hydroxymethyltransferase OS=Staphylococcus aureus (strain MW2) GN=glyA PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.163e-28 Identity = 69/156 (44.23%), Postives = 96/156 (61.54%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 D IA+ IE E RQ +ELI SENF S +VM+A GSV+TNKY+EGYPG RYYGG E++D+ ES+ RA F + VNVQ SGS +N VY L+ D ++ ++L HGGHL+HG ++ F+ + Y +++ T I+YD+ Sbjct: 8 DKVIAEAIEREFQRQNSNIELIASENFVSEAVMEAQGSVLTNKYAEGYPGRRYYGGCEFVDVTESIAIDRAKALFGAE----HVNVQPHSGSQANMAVYLVALEMGDTVLGMNLSHGGHLTHG-----APVNFSGKFYNFVEYGVDKDTERINYDE 154
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_STAAS (Serine hydroxymethyltransferase OS=Staphylococcus aureus (strain MSSA476) GN=glyA PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.163e-28 Identity = 69/156 (44.23%), Postives = 96/156 (61.54%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 D IA+ IE E RQ +ELI SENF S +VM+A GSV+TNKY+EGYPG RYYGG E++D+ ES+ RA F + VNVQ SGS +N VY L+ D ++ ++L HGGHL+HG ++ F+ + Y +++ T I+YD+ Sbjct: 8 DKVIAEAIEREFQRQNSNIELIASENFVSEAVMEAQGSVLTNKYAEGYPGRRYYGGCEFVDVTESIAIDRAKALFGAE----HVNVQPHSGSQANMAVYLVALEMGDTVLGMNLSHGGHLTHG-----APVNFSGKFYNFVEYGVDKDTERINYDE 154
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_STAAR (Serine hydroxymethyltransferase OS=Staphylococcus aureus (strain MRSA252) GN=glyA PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.163e-28 Identity = 69/156 (44.23%), Postives = 96/156 (61.54%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 D IA+ IE E RQ +ELI SENF S +VM+A GSV+TNKY+EGYPG RYYGG E++D+ ES+ RA F + VNVQ SGS +N VY L+ D ++ ++L HGGHL+HG ++ F+ + Y +++ T I+YD+ Sbjct: 8 DKVIAEAIEREFQRQNSNIELIASENFVSEAVMEAQGSVLTNKYAEGYPGRRYYGGCEFVDVTESIAIDRAKALFGAE----HVNVQPHSGSQANMAVYLVALEMGDTVLGMNLSHGGHLTHG-----APVNFSGKFYNFVEYGVDKDTERINYDE 154
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_STAAN (Serine hydroxymethyltransferase OS=Staphylococcus aureus (strain N315) GN=glyA PE=1 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.163e-28 Identity = 69/156 (44.23%), Postives = 96/156 (61.54%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 D IA+ IE E RQ +ELI SENF S +VM+A GSV+TNKY+EGYPG RYYGG E++D+ ES+ RA F + VNVQ SGS +N VY L+ D ++ ++L HGGHL+HG ++ F+ + Y +++ T I+YD+ Sbjct: 8 DKVIAEAIEREFQRQNSNIELIASENFVSEAVMEAQGSVLTNKYAEGYPGRRYYGGCEFVDVTESIAIDRAKALFGAE----HVNVQPHSGSQANMAVYLVALEMGDTVLGMNLSHGGHLTHG-----APVNFSGKFYNFVEYGVDKDTERINYDE 154
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_STAAM (Serine hydroxymethyltransferase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=glyA PE=1 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.163e-28 Identity = 69/156 (44.23%), Postives = 96/156 (61.54%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 D IA+ IE E RQ +ELI SENF S +VM+A GSV+TNKY+EGYPG RYYGG E++D+ ES+ RA F + VNVQ SGS +N VY L+ D ++ ++L HGGHL+HG ++ F+ + Y +++ T I+YD+ Sbjct: 8 DKVIAEAIEREFQRQNSNIELIASENFVSEAVMEAQGSVLTNKYAEGYPGRRYYGGCEFVDVTESIAIDRAKALFGAE----HVNVQPHSGSQANMAVYLVALEMGDTVLGMNLSHGGHLTHG-----APVNFSGKFYNFVEYGVDKDTERINYDE 154 The following BLAST results are available for this feature:
BLAST of FC868797 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868797 ID=FC868797; Name=FC868797; organism=Citrus clementina; type=EST; length=697bpback to top |