FC868801
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868801 vs. ExPASy Swiss-Prot
Match: ISPH_PROMA (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus GN=ispH PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.770e-41 Identity = 79/156 (50.64%), Postives = 106/156 (67.95%), Query Frame = 1 Query: 247 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLK*QNVQIVDTTC 714 D + F+ +L SD YNRRGF + + + + Y S++I +++NG+ G ++VKLAE++GFCWGVERAV +AYE R+ +P E IWITNEIIHNP+VN L M V+ I E+G K F V +GDVV+LPAFGA V EM L + I+DTTC Sbjct: 2 DTQAFKRSLHHSDRYNRRGFESPAKRAQALEKAYQSNLIASIRDNGYLLEHGRLRVKLAEAFGFCWGVERAVAMAYETRRHYPTESIWITNEIIHNPSVNDHLRNMNVRFISAEKGIKDFSSVEEGDVVILPAFGATVHEMKLLHERGCHIIDTTC 157
BLAST of FC868801 vs. ExPASy Swiss-Prot
Match: ISPH_SYNY3 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechocystis sp. (strain PCC 6803) GN=ispH PE=3 SV=2) HSP 1 Score: 155.221 bits (391), Expect = 3.169e-37 Identity = 73/128 (57.03%), Postives = 96/128 (75.00%), Query Frame = 1 Query: 331 LMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLK*QNVQIVDTTC 714 +MN EY S +I+++++N + G+V + LAE++GFCWGVERAV +AYE R+ FP +++WITNEIIHNP+VN+RL EM V I V G+K F V KGDVV+LPAFGA+VEEM L + IVDTTC Sbjct: 3 VMNTEYQSHLIQEIRQNNYRLERGDVTILLAEAFGFCWGVERAVAMAYETRQHFPGDRLWITNEIIHNPSVNQRLREMEVNFIDVVNGEKDFSGVAKGDVVILPAFGASVEEMQLLNDRECTIVDTTC 130
BLAST of FC868801 vs. ExPASy Swiss-Prot
Match: ISPH_GLOVI (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Gloeobacter violaceus GN=ispH PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 5.595e-34 Identity = 70/150 (46.67%), Postives = 100/150 (66.67%), Query Frame = 1 Query: 277 RSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEG----KKQFDVVNKGDVVVLPAFGAAVEEMVTLK*QNVQIVDTTC 714 +S NY R+GFG K E + + EY S +I +++ NG+ G V V+LAE++GFCWGV++AV +AYE + F ++WITNEIIHNP VN+ L M ++ + +E K F+ V++ DVV+LPAFGA+ +EM L +N IVDTTC Sbjct: 2 QSKNYFRKGFGLKAEVQDDLKAEYESSLIHEIRANGYTLRRGGVTVRLAEAFGFCWGVDKAVSMAYETHRMFAGRQLWITNEIIHNPLVNQHLRAMGIRFLDEDESGRRVPKDFERVSEKDVVILPAFGASTQEMQILDEKNCVIVDTTC 151
BLAST of FC868801 vs. ExPASy Swiss-Prot
Match: ISPH_THETN (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Thermoanaerobacter tengcongensis GN=ispH PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.529e-12 Identity = 39/103 (37.86%), Postives = 65/103 (63.11%), Query Frame = 1 Query: 406 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLK*QNVQIVDTTC 714 +++ +AE GFC+GV+RA++IAYE + + +++ EIIHNP V K LEE V+ I EE +K + KGD +++ + G + + L+ + V+I+D TC Sbjct: 1 MEILIAEHAGFCFGVKRAIEIAYEELNKQKDTRLYTLGEIIHNPQVVKDLEEKGVRVIEEEELEK----LLKGDRLIIRSHGISKKLYEFLEQKGVEIIDVTC 99
BLAST of FC868801 vs. ExPASy Swiss-Prot
Match: ISPH_GEOSM (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Geobacter sp. (strain M21) GN=ispH PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.655e-11 Identity = 41/103 (39.81%), Postives = 61/103 (59.22%), Query Frame = 1 Query: 406 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLK*QNVQIVDTTC 714 ++V LA+ GFC+GV+RA Q+A+EA E + IIH+P V +RLEEM V IPVE+ + V G +++ + G A EE+ N+++VD TC Sbjct: 1 MQVILAKHAGFCFGVKRATQLAFEAADTGSE--TYTLGPIIHSPQVVQRLEEMGV--IPVEDVSE----VETGGTIIIRSHGVAAEELEAAVRANLEVVDATC 95 The following BLAST results are available for this feature:
BLAST of FC868801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868801 ID=FC868801; Name=FC868801; organism=Citrus clementina; type=EST; length=715bpback to top |