FC868806
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868806 vs. ExPASy Swiss-Prot
Match: DCAM_VICFA (S-adenosylmethionine decarboxylase proenzyme OS=Vicia faba GN=SAMDC PE=2 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 2.800e-12 Identity = 28/38 (73.68%), Postives = 35/38 (92.11%), Query Frame = 3 Query: 522 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSK 635 + VSAIGFEG+EKRLE+SF +PG+F+DP GRGLRSL+K Sbjct: 1 MAVSAIGFEGFEKRLEISFSDPGLFSDPQGRGLRSLTK 38 HSP 2 Score: 29.261 bits (64), Expect = 2.800e-12 Identity = 13/17 (76.47%), Postives = 14/17 (82.35%), Query Frame = 2 Query: 632 KTSLDEILKPAXCTIVS 682 K+ LDEIL PA CTIVS Sbjct: 38 KSQLDEILAPAECTIVS 54
BLAST of FC868806 vs. ExPASy Swiss-Prot
Match: DCAM_PEA (S-adenosylmethionine decarboxylase proenzyme OS=Pisum sativum GN=SAMDC PE=2 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 2.800e-12 Identity = 28/38 (73.68%), Postives = 35/38 (92.11%), Query Frame = 3 Query: 522 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSK 635 + VSAIGFEG+EKRLE+SF +PG+F+DP GRGLRSL+K Sbjct: 1 MAVSAIGFEGFEKRLEISFSDPGLFSDPQGRGLRSLTK 38 HSP 2 Score: 29.261 bits (64), Expect = 2.800e-12 Identity = 13/17 (76.47%), Postives = 14/17 (82.35%), Query Frame = 2 Query: 632 KTSLDEILKPAXCTIVS 682 K+ LDEIL PA CTIVS Sbjct: 38 KSQLDEILAPAECTIVS 54
BLAST of FC868806 vs. ExPASy Swiss-Prot
Match: DCAM2_ARATH (S-adenosylmethionine decarboxylase proenzyme 2 OS=Arabidopsis thaliana GN=SAMDC2 PE=2 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 1.341e-11 Identity = 27/38 (71.05%), Postives = 34/38 (89.47%), Query Frame = 3 Query: 522 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSK 635 + +SAIGFEGYEKRLEV+FFEPG+F D G+GLR+L+K Sbjct: 1 MAMSAIGFEGYEKRLEVTFFEPGLFLDTQGKGLRALAK 38 HSP 2 Score: 29.261 bits (64), Expect = 1.341e-11 Identity = 12/17 (70.59%), Postives = 15/17 (88.24%), Query Frame = 2 Query: 632 KTSLDEILKPAXCTIVS 682 K+ +DEIL+PA CTIVS Sbjct: 38 KSQIDEILQPAECTIVS 54
BLAST of FC868806 vs. ExPASy Swiss-Prot
Match: DCAM_DAUCA (S-adenosylmethionine decarboxylase proenzyme OS=Daucus carota GN=SAMDC PE=2 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 1.341e-11 Identity = 30/41 (73.17%), Postives = 35/41 (85.37%), Query Frame = 3 Query: 516 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKH 638 M+ VSAIGFEG+EKRLE+SFFEP FADP G+GLR LSK+ Sbjct: 1 MSSEVSAIGFEGFEKRLEISFFEPSFFADPEGKGLRVLSKN 41 HSP 2 Score: 25.7942 bits (55), Expect = 1.341e-11 Identity = 11/17 (64.71%), Postives = 12/17 (70.59%), Query Frame = 2 Query: 632 KTSLDEILKPAXCTIVS 682 K LDE L PA CTIV+ Sbjct: 40 KNQLDEFLGPAECTIVA 56
BLAST of FC868806 vs. ExPASy Swiss-Prot
Match: DCAM2_BRAJU (S-adenosylmethionine decarboxylase proenzyme 2 OS=Brassica juncea GN=SAMDC2 PE=2 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 2.932e-11 Identity = 28/38 (73.68%), Postives = 32/38 (84.21%), Query Frame = 3 Query: 522 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSK 635 + VSAIGFEGYEKRLEVSFFEP +F D G+GLR+L K Sbjct: 1 MSVSAIGFEGYEKRLEVSFFEPSLFVDTHGKGLRALPK 38 HSP 2 Score: 28.4906 bits (62), Expect = 2.932e-11 Identity = 12/17 (70.59%), Postives = 14/17 (82.35%), Query Frame = 2 Query: 632 KTSLDEILKPAXCTIVS 682 K+ +DEIL PA CTIVS Sbjct: 38 KSQIDEILAPAECTIVS 54
BLAST of FC868806 vs. ExPASy Swiss-Prot
Match: DCAM_SPIOL (S-adenosylmethionine decarboxylase proenzyme OS=Spinacia oleracea GN=SAMDC PE=2 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 6.416e-11 Identity = 25/38 (65.79%), Postives = 33/38 (86.84%), Query Frame = 3 Query: 522 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSK 635 + +SAIGFEG+EKRLE++FFEP +F DP G+GLR+L K Sbjct: 1 MAISAIGFEGFEKRLEITFFEPSIFVDPEGKGLRALCK 38 HSP 2 Score: 26.9498 bits (58), Expect = 6.416e-11 Identity = 12/16 (75.00%), Postives = 12/16 (75.00%), Query Frame = 2 Query: 632 KTSLDEILKPAXCTIV 679 K LDEIL PA CTIV Sbjct: 38 KAQLDEILGPAECTIV 53 The following BLAST results are available for this feature:
BLAST of FC868806 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868806 ID=FC868806; Name=FC868806; organism=Citrus clementina; type=EST; length=682bpback to top |