FC868814

Overview
NameFC868814
Unique NameFC868814
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: KDUD_BACSU (2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=Bacillus subtilis GN=kduD PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.286e-12
Identity = 52/168 (30.95%), Postives = 88/168 (52.38%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLN--VDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE 575
            +T L+TG   G+G+ +A+ LA  G  +IG S T     S   +L   +  +F +  +D+    ++++ A  + E + + DI+VNNAG I++  K  D   E +  V++ N+  +  + +     M+    G I+N++S     G  LV  Y ASK AV GL++S A E
Sbjct:   13 KTALVTGPGTGIGQGIAKALAGAGADIIGTSHTSS--LSETQQLVEQEGRIFTSFTLDMSKPEAIKDSAAELFENRQI-DILVNNAGIIHRE-KAEDFPEENWQHVLNVNLNSLFILTQLAGRHMLKRGHGKIINIASLLSFQGGILVPAYTASKHAVAGLTKSFANE 176          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: FOX2_CANTR (Peroxisomal hydratase-dehydrogenase-epimerase OS=Candida tropicalis PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 3.286e-12
Identity = 60/195 (30.77%), Postives = 99/195 (50.77%), Query Frame = 3
Query:   21 TITTMAATTPFNGIGKSVS-----RTVLITGVSRGLGRALAQELAKRGHTVI-----GCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE 575
            T+T  A   P N    + +     + VLITG   GLG+  A+  AK G  V+       ++T D++ +   E   PD H     D+  +S  E + + V++K G  DI+VNNAG + ++     +S +E+D+V   ++ G  N+ R   P  +  + G I+N++S  G  G    A Y +SK  + GLS+++A E
Sbjct:  299 TLTNEARKLPANDASGAPTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAW-PDQH-----DVAKDS--EAIIKNVIDKYGTIDILVNNAGIL-RDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIE 484          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: DR9C7_MOUSE (Short chain dehydrogenase/reductase family 9C member 7 OS=Mus musculus GN=Sdr9c7 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.292e-12
Identity = 56/169 (33.14%), Postives = 90/169 (53.25%), Query Frame = 3
Query:   84 VLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHL--FLNVDIRSNSSVEELARLVVEKKGVPDI--IVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            V ITG   G G  LA++L  RG  V+    T++     Q  L +  H L  FL +D+  + +V+E A+ V ++ G   +  +VNNAG    +     ++ ++F  VI+ N+ G+ ++  + +P MI   +G +VNMSS  GR  A     YC SK+ VE  S S+ +E+
Sbjct:   28 VFITGCDSGFGNLLAKQLVDRGMKVLAACLTEE---GAQKLLQDTSHQLQTFL-LDVTKSENVKEAAQWVRDQVGEQGLWALVNNAGVGLPSGPNEWLTIKDFVKVININLVGLIDVTLNMLP-MIKKARGRVVNMSSSGGRV-AIFGGGYCVSKFGVEAFSDSIRREL 190          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: PHAB_ACISR (Acetoacetyl-CoA reductase OS=Acinetobacter sp. (strain RA3849) GN=phaB PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.606e-12
Identity = 51/172 (29.65%), Postives = 88/172 (51.16%), Query Frame = 3
Query:   69 SVSRTVLITGVSRGLGRALAQELAKRGHTVIGC--SRTQDKLTS-LQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE 575
            S  +  L+TG   G+G  + ++L   G+ +I     R +D+    LQSE        F+  D+ ++ +     +  +  +G  D++VNNAG I ++     +S E++  VIDTN+K +  + +     M+  K G IVN+SS  G  G    A Y ASK  + G ++++A+E
Sbjct:    2 SEQKVALVTGALGGIGSEICRQLVTAGYKIIATVVPREEDREKQWLQSEGFQDSDVRFVLTDLNNHEAATAAIQEAIAAEGRVDVLVNNAG-ITRDATFKKMSYEQWSQVIDTNLKTLFTVTQPVFNKMLEQKSGRIVNISSVNGLKGQFGQANYSASKAGIIGFTKALAQE 172          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: DHRS7_HUMAN (Dehydrogenase/reductase SDR family member 7 OS=Homo sapiens GN=DHRS7 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.606e-12
Identity = 52/170 (30.59%), Postives = 88/170 (51.76%), Query Frame = 3
Query:   84 VLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSE-LPNPDHH----LFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            V +TG S G+G  LA +L+K G +++  +R   +L  ++   L N +      L L +D+    S E   + V+++ G  DI+VNN G +++ +   D S + +  +I+ N  G  ++ +  +P MI  KQG IV ++S  G     L   YCASK A+ G    +  E+
Sbjct:   53 VWVTGASSGIGEELAYQLSKLGVSLVLSARRVHELERVKRRCLENGNLKEKDILVLPLDLTDTGSHEAATKAVLQEFGRIDILVNNGG-MSQRSLCMDTSLDVYRKLIELNYLGTVSLTKCVLPHMIERKQGKIVTVNSILGIISVPLSIGYCASKHALRGFFNGLRTEL 221          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: YI13_SCHPO (Uncharacterized oxidoreductase C521.03 OS=Schizosaccharomyces pombe GN=SPAC521.03 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.321e-12
Identity = 49/172 (28.49%), Postives = 90/172 (52.33%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHT-VIGCSRTQDKLTSLQSELPNPDHH--LFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD 584
            +T+LITG S G+G++ A E+AK     +I  +R    +  +  EL +      L L +D+    S+  +   + ++    D+++NNAG     +K+ D++ ++  T+I TNV G+  M R  +P+     +G I+N+ S  GR      + YC++K A+   + ++ KE  D
Sbjct:    7 KTILITGASSGIGKSTAFEIAKVAKVKLILAARRFSTVEEIAKELESKYEVSVLPLKLDVSDLKSIPGVIESLPKEFADIDVLINNAGLALGTDKVIDLNIDDAVTMITTNVLGMMAMTRAVLPIFYSKNKGDILNVGSIAGRESYVGGSVYCSTKSALAQFTSALRKETID 178          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: GNO_GLUOX (Gluconate 5-dehydrogenase OS=Gluconobacter oxydans GN=gno PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.321e-12
Identity = 51/164 (31.10%), Postives = 83/164 (50.61%), Query Frame = 3
Query:   87 LITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNV-DIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE 575
            L+TG SRG+G  LA+ LA+ G  V+   R  + L S QS            V D+    +V +    +    G  DI++NNAG I +   + + S +++D ++ TNV  +  + +     MIP  +G IVN+ S         +APY A+K AV+ L++ +A +
Sbjct:   15 LVTGASRGIGLTLAKGLARYGAEVVLNGRNAESLDSAQSGFEAEGLKASTAVFDVTDQDAVIDGVAAIERDMGPIDILINNAG-IQRRAPLEEFSRKDWDDLMSTNVNAVFFVGQAVARHMIPRGRGKIVNICSVQSELARPGIAPYTATKGAVKNLTKGMATD 177          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: FABG_AQUAE (3-oxoacyl-[acyl-carrier-protein] reductase OS=Aquifex aeolicus GN=fabG PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.321e-12
Identity = 55/177 (31.07%), Postives = 97/177 (54.80%), Query Frame = 3
Query:   66 KSVSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPN----PDHHLFLNV--DIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            K   +  L+TG +RG+GRA+A++LA  G TVI    + ++  ++  E+ N      H + +N+  +   N + EE+  LV    G+ DI+VNNAG I ++     +S  +++ V+  N+ G   + ++ +  MI  + G IVN+SS  G +G      Y  +K  + G ++S+AKE+
Sbjct:    4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLV---DGI-DILVNNAG-ITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKEL 175          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: Y484_MYCTU (Uncharacterized oxidoreductase Rv0484c/MT0502 OS=Mycobacterium tuberculosis GN=Rv0484c PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.562e-12
Identity = 50/167 (29.94%), Postives = 84/167 (50.30%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            R  ++TG S G+G A A+ LA +G  V+  +R  D++T+L +++        +  D+  +++VE LAR +       D++VNNAG       + D   E +  + DTNV G   + R  +P +I    G+IV ++S          A Y A+K A   L R++  E+
Sbjct:    9 RVAVVTGASSGIGEATARTLAAQGFHVVAVARRADRITALANQIGG----TAIVADVTDDAAVEALARALSR----VDVLVNNAGGAKGLQFVADADLEHWRWMWDTNVLGTLRVTRALLPKLIDSGDGLIVTVTSIAAIEVYDGGAGYTAAKHAQGALHRTLRGEL 167          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: YD114_YEAST (Uncharacterized oxidoreductase YDL114W OS=Saccharomyces cerevisiae GN=YDL114W PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.249e-11
Identity = 54/168 (32.14%), Postives = 88/168 (52.38%), Query Frame = 3
Query:   69 SVSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAK 572
            S + T LITG S GLG  LA+EL++R + VI  +  Q   T  Q E  N     +   DI S   ++ L + +    G  +II+NNAG  +   K+  ++ +E + +ID N+ G   ++  F   MI  ++G I+N++S  G    A +  Y ASK A+ G  + +++
Sbjct:   36 SKNATALITGGSSGLGFELAKELSRRINKVI-VADIQSFPTFAQVEYNNI---FYYQCDITSLDEIKNLKKAIERDHGNINIIINNAGVAHIK-KLEHMTNKEVEQLIDINLIGAYRIISTFAEDMIDNREGFIINIASVLGELTPARLTSYGASKGAMIGFHKCMSR 198          
The following BLAST results are available for this feature:
BLAST of FC868814 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
KDUD_BACSU3.286e-1230.952-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=B... [more]
FOX2_CANTR3.286e-1230.77Peroxisomal hydratase-dehydrogenase-epimerase OS=C... [more]
DR9C7_MOUSE4.292e-1233.14Short chain dehydrogenase/reductase family 9C memb... [more]
PHAB_ACISR5.606e-1229.65Acetoacetyl-CoA reductase OS=Acinetobacter sp. (st... [more]
DHRS7_HUMAN5.606e-1230.59Dehydrogenase/reductase SDR family member 7 OS=Hom... [more]
YI13_SCHPO7.321e-1228.49Uncharacterized oxidoreductase C521.03 OS=Schizosa... [more]
GNO_GLUOX7.321e-1231.10Gluconate 5-dehydrogenase OS=Gluconobacter oxydans... [more]
FABG_AQUAE7.321e-1231.073-oxoacyl-[acyl-carrier-protein] reductase OS=Aqui... [more]
Y484_MYCTU9.562e-1229.94Uncharacterized oxidoreductase Rv0484c/MT0502 OS=M... [more]
YD114_YEAST1.249e-1132.14Uncharacterized oxidoreductase YDL114W OS=Saccharo... [more]

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Properties
Property NameValue
Genbank descriptionC31005B02EF AbioticL1 Citrus clementina cDNA clone C31005B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868814 ID=FC868814; Name=FC868814; organism=Citrus clementina; type=EST; length=687bp
GGGGGAGAGGGAGGGAAATAACAATAACAACGATGGCAGCAACGACGCCG
TTTAACGGGATAGGGAAGAGCGTATCGCGAACAGTACTGATAACGGGAGT
GAGCAGAGGATTAGGGCGAGCCCTAGCTCAAGAGTTGGCCAAGCGCGGCC
ACACCGTGATCGGCTGCTCCCGCACTCAGGATAAGCTCACCTCCCTCCAA
TCAGAACTCCCTAATCCCGACCACCACCTCTTCCTCAATGTCGACATCAG
GTCAAATAGCAGTGTTGAAGAACTAGCACGTCTTGTCGTGGAGAAGAAAG
GCGTTCCTGATATTATAGTAAACAATGCAGGTACTATTAATAAAAATAAC
AAGATTTGGGATGTTTCGCCAGAAGAATTCGACACTGTTATTGATACTAA
TGTGAAAGGCATAGCAAATATGTTGCGTCACTTCATTCCTTTGATGATTC
CAATCAAGCAAGGGATTATCGTTAATATGTCTTCTGGTTGGGGAAGATCT
GGTGCTGCCCTGGTAGCACCTTATTGTGCTTCAAAATGGGCAGTTGAAGG
GTTGTCCAGATCAGTGGCAAAGGAGGTGCCTGATGGGATGGCAATTGTTG
CTTTAATCCTGGTGTTATTACACTGACATGCTTACGTCCTGCTTTGGCAC
TTCTGCTGCATCATACCAGCACCTGATGCATGGGCTT
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