FC868814

Overview
NameFC868814
Unique NameFC868814
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: Y325_THEMA (Uncharacterized oxidoreductase TM_0325 OS=Thermotoga maritima GN=TM_0325 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.249e-11
Identity = 55/170 (32.35%), Postives = 86/170 (50.59%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHL-FLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD 584
            + VLITG   G+G+  A   A+RG  V     +++K       + +      F+  D+  ++  E++ +  VE  G  DI+VNNAG +   N I + S E+FD  +  NVKG   + ++ +  M     G+IVN+SS  G  G      Y  SK A+ GL+RS+A +  D
Sbjct:    6 KVVLITGAGSGIGKKAAVMFAERGAKVAINDISEEKGKETVELIKSMGGEAAFIFGDVAKDA--EQIVKKTVETFGRLDILVNNAGIVPYGN-IEETSEEDFDKTMAVNVKGPFLLSKYAVEQMKKQGGGVIVNVSSEAGLIGIPRRCVYSVSKAALLGLTRSLAVDYVD 172          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: HCD2_DROME (3-hydroxyacyl-CoA dehydrogenase type-2 OS=Drosophila melanogaster GN=scu PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.249e-11
Identity = 59/175 (33.71%), Postives = 85/175 (48.57%), Query Frame = 3
Query:   87 LITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTIN-----KNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLM------IPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            L+TG + GLGRA A+ LAK+G +VI       K   +  EL   D  +F+ VD+ S   V    +   +K G  D+ VN AGT         NK      E+F  VI+ N  G  N++R    LM         ++G+IVN +S     G    A Y ASK AV G++  +A+++
Sbjct:    8 LVTGGASGLGRATAERLAKQGASVILADLPSSKGNEVAKEL--GDKVVFVPVDVTSEKDVSAALQTAKDKFGRLDLTVNCAGTATAVKTFNFNKNVAHRLEDFQRVININTVGTFNVIRLSAGLMGANEPNQDGQRGVIVNTASVAAFDGQIGQAAYSASKAAVVGMTLPIARDL 180          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: KDSR_BOVIN (3-ketodihydrosphingosine reductase OS=Bos taurus GN=KDSR PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.631e-11
Identity = 51/171 (29.82%), Postives = 88/171 (51.46%), Query Frame = 3
Query:   84 VLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHH-----LFLNVDIRSN-SSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            V++TG S G+G+ +A E  K+G  +   +R +DKL   + E+     +     L ++VD+  + S VE + +   EK G  D++VN AG ++ + K  D+    F+ ++  N  G     R  I  M   + G +V +SS  G+ G      Y +SK+A+ GL+ ++  EV
Sbjct:   35 VVVTGGSSGIGKCIAIECYKQGAFITLVARNEDKLLQAKKEIEKHSINDKQVVLCISVDVSQDYSQVENVIKQAQEKLGPVDMLVNCAG-MSLSGKFEDLEVSTFERLMSINYLGSVYPSRAVIATMKERRMGRVVFVSSQAGQLGLFGYTAYSSSKFALRGLAEALQMEV 204          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: DRS7B_BOVIN (Dehydrogenase/reductase SDR family member 7B OS=Bos taurus GN=DHRS7B PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.631e-11
Identity = 52/172 (30.23%), Postives = 81/172 (47.09%), Query Frame = 3
Query:   84 VLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSEL-----PNPDHHLFLNV--DIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            V+ITG + GLGR  A+     G  ++ C R  + L  L  EL     P    H    V  D+    ++   A  +++  G  D+++NNAG I+    I D SP+    V++TN  G   + +  +P MI  +QG +V +SS  G+      + Y ASK A +     +  EV
Sbjct:   55 VVITGATSGLGRECARVFHAAGARLVLCGRNAEALEELSQELAASRAPGVQTHKPCTVTFDLADPGAIAGAASEILQCFGHVDVLINNAG-ISYRGAIVDTSPDVDKRVMETNYFGPVALTKALLPAMIRRRQGHVVAISSIQGKISLPFRSAYAASKHATQAFFDCLRAEV 225          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: BDH_HUMAN (D-beta-hydroxybutyrate dehydrogenase, mitochondrial OS=Homo sapiens GN=BDH1 PE=1 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 1.631e-11
Identity = 54/174 (31.03%), Postives = 86/174 (49.43%), Query Frame = 3
Query:   75 SRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELP--NPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDI----IVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            S+ VL+TG   G G +LA+ L  +G  V      +DK      EL   N D    + +++ S+  VE++  +V      P+     +VNNAG I+   ++   S E +  V + N+ G   M + F+PL+   K G +VN+SS  GR      +PYC +K+ VE  S  +  E+
Sbjct:   55 SKAVLVTGCDSGFGFSLAKHLHSKGFLVFAGCLMKDKGHDGVKELDSLNSDRLRTVQLNVCSSEEVEKVVEIVRSSLKDPEKGMWGLVNNAG-ISTFGEVEFTSLETYKQVAEVNLWGTVRMTKSFLPLIRRAK-GRVVNISSMLGRMANPARSPYCITKFGVEAFSDCLRYEM 226          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: DHB13_RAT (17-beta hydroxysteroid dehydrogenase 13 OS=Rattus norvegicus GN=Hsd17b13 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.130e-11
Identity = 53/179 (29.61%), Postives = 88/179 (49.16%), Query Frame = 3
Query:   66 KSVS-RTVLITGVSRGLGRALAQELAKRGHTVI-------GCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            KSV+ +TVLITG   G+GR  A E AK+   ++       G   T  K   L + +     H+F+ VD  + + + +    V ++ G  +I+VNNAG I   + +     EE     + N+ G   +++  +P M+    G IV ++S  G      + PYC+SK+A  G  R++  E+
Sbjct:   32 KSVAGQTVLITGAGHGIGRLTAYEFAKQKSRLVLWDISKHGVEETAAKCRKLGAVV-----HVFV-VDCSNRAEIYKSVDQVKKEVGDIEIVVNNAGAIYPADLL-STKDEEITKTFEVNILGHFWIIKALLPSMLRRNSGHIVTVASVCGHRVIPYLIPYCSSKFAAVGFHRALTAEL 203          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: YVRD_BACSU (Uncharacterized oxidoreductase yvrD OS=Bacillus subtilis GN=yvrD PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.782e-11
Identity = 52/167 (31.14%), Postives = 80/167 (47.90%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLV--VEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAK 572
            + VLITG + G+G+A A+   + G  VI   R Q+ +     EL           D+   S  +E A  +  V + G  DI+VNN G     +   DV+ EE++   + NV       RHF+P M+    G I+N++S  G      + PY  +K A+  LSR +A+
Sbjct:    8 KLVLITGSTSGIGKAAAKSFLQEGAAVIVNGRKQETVDRTIEELSGYGTVHGAAADL---SKTDEAAAFIEKVNEIGDIDILVNNLGFFEVKD-FADVTDEEWNQYFEVNVMSAVRTSRHFLPKMLAKNSGRILNIASEAGVKPLPTMIPYSMTKTALISLSRGMAE 170          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: RDHE2_HUMAN (Epidermal retinol dehydrogenase 2 OS=Homo sapiens GN=SDR16C5 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.782e-11
Identity = 52/166 (31.33%), Postives = 75/166 (45.18%), Query Frame = 3
Query:   84 VLITGVSRGLGRALAQELAKRGHTVI--GCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE 575
            VLITG   GLGR LA + A+ G  ++    ++  ++ T   +             D      V  +A  V ++ G   I++NNAG +    K  D   E  +   D N K      + F+P MI    G +V +SS  G SG   +A YCASK+A  G + SV  E
Sbjct:   43 VLITGAGSGLGRLLALQFARLGSVLVLWDINKEGNEETCKMAREAGATRVHAYTCDCSQKEGVYRVADQVKKEVGDVSILINNAGIVT-GKKFLDCPDELMEKSFDVNFKAHLWTYKAFLPAMIANDHGHLVCISSSAGLSGVNGLADYCASKFAAFGFAESVFVE 207          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: MKAR_USTMA (3-ketoacyl-CoA reductase OS=Ustilago maydis GN=UM04441 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.782e-11
Identity = 47/171 (27.49%), Postives = 90/171 (52.63%), Query Frame = 3
Query:   87 LITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHL-----FLNVDIRSNSSVEELARLVVEKKGV-PDIIVNNAG-TINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            ++TG + G+GR  A +LA++G  ++  SR+ +KL S+ +E+      +      ++  +      E L   V   KG+   ++VNN G + N      + S EE + +I+ NV  +  + +  IP M+  K+G+++N+ S  G+    ++A Y  SK  + G S+++ +EV
Sbjct:   79 VVTGATDGIGREFALQLARKGFNIVLVSRSPEKLGSVAAEIEAATPGVRTKTQAIDFALGDERQYEGLEHTV---KGLNVGVLVNNVGKSHNMPVTFTETSEEEMEDIIEINVVSVLRVSKMIIPGMVDRKRGLVLNLGSFAGQVTTPMLATYAGSKAFLSGWSQALGEEV 246          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: Y1627_STAS1 (Uncharacterized oxidoreductase SSP1627 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP1627 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.633e-11
Identity = 46/171 (26.90%), Postives = 82/171 (47.95%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGT-----INKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE 575
            + V+ITG S G+G      L++ G  ++  +R  D+L  +Q ++ + D       D+     V  L        G  D+++NNAG      + KN +      +E++ +ID N+KG+   +   +P M   K G I+N++S  G       A YC +K+AV  ++  + +E
Sbjct:    7 KVVVITGASSGIGEETVNLLSENGAKLVLGARRLDRLEKIQQKVGH-DSVSIKKTDVTKPDEVNALIETAYNDFGRIDVLINNAGLMPQSFLEKNKQ------DEWNQMIDVNIKGVLYGIGAVLPYMRKQKSGHIINLASVAGHVVFPGSAVYCGTKYAVRAITEGLRQE 170          
The following BLAST results are available for this feature:
BLAST of FC868814 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
Y325_THEMA1.249e-1132.35Uncharacterized oxidoreductase TM_0325 OS=Thermoto... [more]
HCD2_DROME1.249e-1133.713-hydroxyacyl-CoA dehydrogenase type-2 OS=Drosophi... [more]
KDSR_BOVIN1.631e-1129.823-ketodihydrosphingosine reductase OS=Bos taurus G... [more]
DRS7B_BOVIN1.631e-1130.23Dehydrogenase/reductase SDR family member 7B OS=Bo... [more]
BDH_HUMAN1.631e-1131.03D-beta-hydroxybutyrate dehydrogenase, mitochondria... [more]
DHB13_RAT2.130e-1129.6117-beta hydroxysteroid dehydrogenase 13 OS=Rattus ... [more]
YVRD_BACSU2.782e-1131.14Uncharacterized oxidoreductase yvrD OS=Bacillus su... [more]
RDHE2_HUMAN2.782e-1131.33Epidermal retinol dehydrogenase 2 OS=Homo sapiens ... [more]
MKAR_USTMA2.782e-1127.493-ketoacyl-CoA reductase OS=Ustilago maydis GN=UM0... [more]
Y1627_STAS13.633e-1126.90Uncharacterized oxidoreductase SSP1627 OS=Staphylo... [more]

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Properties
Property NameValue
Genbank descriptionC31005B02EF AbioticL1 Citrus clementina cDNA clone C31005B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868814 ID=FC868814; Name=FC868814; organism=Citrus clementina; type=EST; length=687bp
GGGGGAGAGGGAGGGAAATAACAATAACAACGATGGCAGCAACGACGCCG
TTTAACGGGATAGGGAAGAGCGTATCGCGAACAGTACTGATAACGGGAGT
GAGCAGAGGATTAGGGCGAGCCCTAGCTCAAGAGTTGGCCAAGCGCGGCC
ACACCGTGATCGGCTGCTCCCGCACTCAGGATAAGCTCACCTCCCTCCAA
TCAGAACTCCCTAATCCCGACCACCACCTCTTCCTCAATGTCGACATCAG
GTCAAATAGCAGTGTTGAAGAACTAGCACGTCTTGTCGTGGAGAAGAAAG
GCGTTCCTGATATTATAGTAAACAATGCAGGTACTATTAATAAAAATAAC
AAGATTTGGGATGTTTCGCCAGAAGAATTCGACACTGTTATTGATACTAA
TGTGAAAGGCATAGCAAATATGTTGCGTCACTTCATTCCTTTGATGATTC
CAATCAAGCAAGGGATTATCGTTAATATGTCTTCTGGTTGGGGAAGATCT
GGTGCTGCCCTGGTAGCACCTTATTGTGCTTCAAAATGGGCAGTTGAAGG
GTTGTCCAGATCAGTGGCAAAGGAGGTGCCTGATGGGATGGCAATTGTTG
CTTTAATCCTGGTGTTATTACACTGACATGCTTACGTCCTGCTTTGGCAC
TTCTGCTGCATCATACCAGCACCTGATGCATGGGCTT
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