FC868814

Overview
NameFC868814
Unique NameFC868814
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: CBR4_XENTR (Carbonyl reductase family member 4 OS=Xenopus tropicalis GN=cbr4 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.198e-11
Identity = 47/169 (27.81%), Postives = 88/169 (52.07%), Query Frame = 3
Query:   72 VSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            +++   + G SRG+G+A+++ LA+R + V   SR  +   +  +E+     HL L+ D+   + +++  + +    G  D +VN+AG I ++  +     E+  +++  N+ G     +  +  MI  + G IVN+ S  G  G    + Y ASK  + G S+S+AKEV
Sbjct:    1 MTKVCAVFGGSRGIGKAVSKLLAQRDYKVAVISRDLEVAKAAAAEV---GAHLALSCDVSKENEIQDTFKEITNNLGNVDYLVNSAG-IRRDALLLRTRSEDIRSLLSVNLVGTIQTCKLALRSMIQQQGGAIVNIGSIVGHKGNIGQSIYGASKEGLIGFSKSLAKEV 165          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: BPHB_PSEPU (Cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase OS=Pseudomonas putida GN=bphB PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.198e-11
Identity = 54/178 (30.34%), Postives = 88/178 (49.44%), Query Frame = 3
Query:   66 KSVSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEE-----FDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSG--WGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            K     VLITG + GLGRAL          V    ++ ++L  L+++  + D+ L +  D+RS    ++ A   V K G  D ++ NAG  + +  + D+ PEE     FD V   NVKG  + ++  +P ++  +  +I  +S+   +   G  L   Y A+K AV GL R +A E+
Sbjct:    2 KLTGEVVLITGGASGLGRALVDRFVAERAKVAVLDKSAERLAQLETD--HGDNVLGVTGDVRSLEDQKQAASRCVAKFGKIDTLIPNAGIWDYSTALIDL-PEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNGGGPL---YTAAKHAVVGLVRELAFEL 173          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: BPHB_BURXL (Cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase OS=Burkholderia xenovorans (strain LB400) GN=bphB PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.198e-11
Identity = 53/178 (29.78%), Postives = 89/178 (50.00%), Query Frame = 3
Query:   66 KSVSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEE-----FDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSG--WGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            K     VLITG + GLGRAL       G  V    ++ ++L  L+++  + D+ L +  D+RS    ++ A   V + G  D ++ NAG  + +  + D+ PEE     FD V   NVKG  + ++  +P ++  +  +I  +S+   +   G  L   Y A+K A+ GL R +A E+
Sbjct:    2 KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETD--HGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDL-PEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNGGGPL---YTAAKHAIVGLVRELAFEL 173          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: TRN2_HYONI (Tropinone reductase 2 OS=Hyoscyamus niger GN=TR2 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11
Identity = 54/168 (32.14%), Postives = 88/168 (52.38%), Query Frame = 3
Query:   81 TVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNV-DIRSNSSVEELARLVVEK-KGVPDIIVNNAG-TINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE 575
            T L+TG SRG+G  + +ELA  G +V  CSR Q +L    ++  +   ++  +V D+ S S  EE  + V     G  +I+VNNAG  I K  K  D + E++  ++  N +   ++     P +   ++G +V +SS  G S     A Y A+K A++ L+R +A E
Sbjct:   11 TALVTGGSRGIGYGIVEELANLGASVYTCSRNQKELDECLTQWRSKGFNVEASVCDLSSRSEREEFMKTVSNHFHGKLNILVNNAGIVIYKEAK--DYTMEDYSHIMSINFEAAYHLSVLAHPFLKASERGNVVFISSISGASALPYEAVYGATKGAMDQLTRCLAFE 176          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: HCDR_XANP2 (2-(R)-hydroxypropyl-CoM dehydrogenase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=xecD PE=1 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11
Identity = 58/175 (33.14%), Postives = 84/175 (48.00%), Query Frame = 3
Query:   72 VSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKL--TSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAG-TINKNNKIWDVSP-EEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVA-----PYCASKWAVEGLSRSVA 569
            +SR  ++TG S G G A+A     RG  V     + + L  T+        D  L +  D+     V       +E+ G  D++VNNAG T N    +   +P E+FD V+  NV+GI    R  +P M+    G+IVN++     S A+LVA      Y  SK AV  L++SVA
Sbjct:    1 MSRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIA-----SVASLVAFPGRSAYTTSKGAVLQLTKSVA 170          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: DHBA_BACSU (2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase OS=Bacillus subtilis GN=dhbA PE=1 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11
Identity = 44/170 (25.88%), Postives = 80/170 (47.06%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHL-FLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD 584
            +   ITG ++G+G A+A+ LA +G  +       +KL  + S L     H      D+R +++++E+   +  + G  DI+VN AG + +   I  +S EE++     N  G+ N  R     M+  + G IV + S         +A Y +SK A    ++ +  E+ +
Sbjct:    9 KIAFITGAAQGIGEAVARTLASQGAHIAAVDYNPEKLEKVVSSLKAEGRHAEAFPADVRDSAAIDEITARIEREMGPIDILVNVAGVL-RPGLIHSLSDEEWEATFSVNSTGVFNASRSVSKYMMDRRSGSIVTVGSNAAGVPRTSMAAYASSKAAAVMFTKCLGLELAE 177          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: DHB12_MOUSE (Estradiol 17-beta-dehydrogenase 12 OS=Mus musculus GN=Hsd17b12 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11
Identity = 50/182 (27.47%), Postives = 96/182 (52.75%), Query Frame = 3
Query:   60 IGKSVSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRS---NSSVEELARLVVEKKGVP----DIIVNNAGTINKNNKIWDVSPEEFDTV---IDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE 575
            +G  +    ++TG + G+G+A A+ELAKRG  ++  SR+QDKL  + + +         NV+ R+   + S++++   +  K G+      ++VNN G   +  + +   P+  +T+   I+ NV  +  + R  +P M+   +G+I+N+SS  G     L+  Y A+K  V+  S+ + +E
Sbjct:   45 VGPRLGEWAVVTGGTDGIGKAYAEELAKRGMKIVLISRSQDKLNQVSNNIKEK-----FNVETRTIAVDFSLDDIYDKI--KTGLSGLEIGVLVNNVGMSYEYPEYFLEIPDLDNTIKKLININVLSVCKVTRLVLPGMVERSKGVILNISSASGMLPVPLLTIYSATKAFVDFFSQCLHEE 219          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: DHB12_ANAPL (Estradiol 17-beta-dehydrogenase 12 OS=Anas platyrhynchos GN=HSD17B12 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11
Identity = 49/177 (27.68%), Postives = 85/177 (48.02%), Query Frame = 3
Query:   60 IGKSVSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNP--DHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPE---EFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE 575
            +G  +    ++TG + G+G+A A+ELAKRG  V   SR+++KL  +  E+          +  D      + +  R  +E   +  ++VNN G      + +   P+     D +I+ N+  +  M R  +P M+   +G+I+N+SS  G     L+  Y ASK  V+  SR +  E
Sbjct:   43 LGPGLGAWAVVTGATDGIGKAYAKELAKRGMKVALISRSKEKLDQVAGEITEQYGVETKVIVADFGEREDIYDRIRAGLEGLEI-GVLVNNVGISYSYPEYFIDVPDLDKTIDKMININIMSVCKMTRLVLPGMLERSKGVILNISSAAGMYPTPLLTLYSASKAFVDYFSRGLHAE 218          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: BUTA_STAES (Acetoin(diacetyl) reductase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=butA PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11
Identity = 47/173 (27.17%), Postives = 83/173 (47.98%), Query Frame = 3
Query:   72 VSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHH-LFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIK-QGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD 584
            +S+T +ITG + GLG+ +A+ LA  G  ++     +  L   + E     +  +    D+      EEL +  V + G  D++VNNAG ++    I ++  EE   + + NV G    ++      I  K +G I+N  S  G     ++  Y A+K +V   +++ AKE+ D
Sbjct:    1 MSKTAIITGAAGGLGKGIAERLANDGFNIVLQDINEALLLETEKEFKEKGYQAVAYKSDVSKKKEQEELVQFAVTEFGQLDVMVNNAG-VDAVTPILEIGEEELSKLFNINVFGTLFGIQAAANQFIKQKSKGKIINACSIAGHESYEVLGTYSATKHSVRSFTQTAAKELAD 172          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: ACR1_ACIBI (Fatty acyl-CoA reductase OS=Acinetobacter baylyi GN=acr1 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11
Identity = 45/170 (26.47%), Postives = 89/170 (52.35%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFL-NVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKN--NKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            +  LITG S G+G  +A+ +A  G  V+  +RTQ+ L  +++ +        +   D+   +++++L++ ++      D ++NNAG   +   ++ +D    +F+  +  N  G   ++ + +P MI  K G I+N+SS    + A   + Y ASK A++  SR ++ EV
Sbjct:   16 KVALITGASSGIGLTIAKRIAAAGAHVLLVARTQETLEEVKAAIEQQGGQASIFPCDLTDMNAIDQLSQQIMASVDHVDFLINNAGRSIRRAVHESFDRF-HDFERTMQLNYFGAVRLVLNLLPHMIKRKNGQIINISSIGVLANATRFSAYVASKAALDAFSRCLSAEV 184          
The following BLAST results are available for this feature:
BLAST of FC868814 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CBR4_XENTR6.198e-1127.81Carbonyl reductase family member 4 OS=Xenopus trop... [more]
BPHB_PSEPU6.198e-1130.34Cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase OS=... [more]
BPHB_BURXL6.198e-1129.78Cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase OS=... [more]
TRN2_HYONI8.094e-1132.14Tropinone reductase 2 OS=Hyoscyamus niger GN=TR2 P... [more]
HCDR_XANP28.094e-1133.142-(R)-hydroxypropyl-CoM dehydrogenase OS=Xanthobac... [more]
DHBA_BACSU8.094e-1125.882,3-dihydro-2,3-dihydroxybenzoate dehydrogenase OS... [more]
DHB12_MOUSE8.094e-1127.47Estradiol 17-beta-dehydrogenase 12 OS=Mus musculus... [more]
DHB12_ANAPL8.094e-1127.68Estradiol 17-beta-dehydrogenase 12 OS=Anas platyrh... [more]
BUTA_STAES8.094e-1127.17Acetoin(diacetyl) reductase OS=Staphylococcus epid... [more]
ACR1_ACIBI8.094e-1126.47Fatty acyl-CoA reductase OS=Acinetobacter baylyi G... [more]

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Properties
Property NameValue
Genbank descriptionC31005B02EF AbioticL1 Citrus clementina cDNA clone C31005B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868814 ID=FC868814; Name=FC868814; organism=Citrus clementina; type=EST; length=687bp
GGGGGAGAGGGAGGGAAATAACAATAACAACGATGGCAGCAACGACGCCG
TTTAACGGGATAGGGAAGAGCGTATCGCGAACAGTACTGATAACGGGAGT
GAGCAGAGGATTAGGGCGAGCCCTAGCTCAAGAGTTGGCCAAGCGCGGCC
ACACCGTGATCGGCTGCTCCCGCACTCAGGATAAGCTCACCTCCCTCCAA
TCAGAACTCCCTAATCCCGACCACCACCTCTTCCTCAATGTCGACATCAG
GTCAAATAGCAGTGTTGAAGAACTAGCACGTCTTGTCGTGGAGAAGAAAG
GCGTTCCTGATATTATAGTAAACAATGCAGGTACTATTAATAAAAATAAC
AAGATTTGGGATGTTTCGCCAGAAGAATTCGACACTGTTATTGATACTAA
TGTGAAAGGCATAGCAAATATGTTGCGTCACTTCATTCCTTTGATGATTC
CAATCAAGCAAGGGATTATCGTTAATATGTCTTCTGGTTGGGGAAGATCT
GGTGCTGCCCTGGTAGCACCTTATTGTGCTTCAAAATGGGCAGTTGAAGG
GTTGTCCAGATCAGTGGCAAAGGAGGTGCCTGATGGGATGGCAATTGTTG
CTTTAATCCTGGTGTTATTACACTGACATGCTTACGTCCTGCTTTGGCAC
TTCTGCTGCATCATACCAGCACCTGATGCATGGGCTT
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