FC868814

Overview
NameFC868814
Unique NameFC868814
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig7605 contig Ccv1_Contig7605:12..700. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: FABG_ECOLI (3-oxoacyl-[acyl-carrier-protein] reductase OS=Escherichia coli (strain K12) GN=fabG PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.989e-17
Identity = 55/167 (32.93%), Postives = 94/167 (56.29%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            +  L+TG SRG+GRA+A+ LA RG  VIG + +++   ++   L      L LNV     +S+E +   +  + G  DI+VNNAG I ++N +  +  EE++ +I+TN+  +  + +  +  M+  + G I+ + S  G  G    A Y A+K  + G S+S+A+EV
Sbjct:    6 KIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNV--TDPASIESVLEKIRAEFGEVDILVNNAG-ITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREV 169          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: FABG_BUCAI (3-oxoacyl-[acyl-carrier-protein] reductase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=fabG PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.431e-17
Identity = 55/167 (32.93%), Postives = 95/167 (56.89%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            +T  ITG ++G+G+A+A++L K+G  VIG S T+D +  +   L        LN  +++  S+ E  + + +KK   DI++NNAG I ++N + ++   E+D VI TN+  + ++++  I  MI  +QG I+ + S    +G      Y ASK  + G  +S+A EV
Sbjct:    6 QTAFITGANQGIGKAIAKKLIKKGIQVIGTSTTEDGVKRINDYLEGNGFGFVLN--LKNIDSITEKIQEIYKKKHSIDILINNAG-IKEDNLLVNMKSTEWDDVIKTNLSSVFHLVKSVIRSMIKKRQGRIITIGSVIAYTGNKGQVNYSASKSGLIGFHKSLALEV 169          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: FABG_SALTY (3-oxoacyl-[acyl-carrier-protein] reductase OS=Salmonella typhimurium GN=fabG PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.289e-16
Identity = 54/167 (32.34%), Postives = 94/167 (56.29%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            +  L+TG SRG+GRA+A+ L  RG  VIG + +++   ++   L      L LNV     +S+E +   +  + G  DI+VNNAG I ++N +  +  +E++ +I+TN+  +  + +  +  M+  + G I+ + S  G  G A  A Y A+K  + G S+S+A+EV
Sbjct:    6 KIALVTGASRGIGRAIAETLVARGAKVIGTATSENGAKNISDYLGANGKGLMLNV--TDPASIESVLENIRAEFGEVDILVNNAG-ITRDNLLMRMKDDEWNDIIETNLSSVFRLSKAVMRAMMKKRCGRIITIGSVVGTMGNAGQANYAAAKAGLIGFSKSLAREV 169          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: FABG_SALTI (3-oxoacyl-[acyl-carrier-protein] reductase OS=Salmonella typhi GN=fabG PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.289e-16
Identity = 54/167 (32.34%), Postives = 94/167 (56.29%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            +  L+TG SRG+GRA+A+ L  RG  VIG + +++   ++   L      L LNV     +S+E +   +  + G  DI+VNNAG I ++N +  +  +E++ +I+TN+  +  + +  +  M+  + G I+ + S  G  G A  A Y A+K  + G S+S+A+EV
Sbjct:    6 KIALVTGASRGIGRAIAETLVARGAKVIGTATSENGAKNISDYLGANGKGLMLNV--TDPASIESVLENIRAEFGEVDILVNNAG-ITRDNLLMRMKDDEWNDIIETNLSSVFRLSKAVMRAMMKKRCGRIITIGSVVGTMGNAGQANYAAAKAGLIGFSKSLAREV 169          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: Y0585_STAHJ (Uncharacterized oxidoreductase SH0585 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=SH0585 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.684e-16
Identity = 57/169 (33.73%), Postives = 91/169 (53.85%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAV----EGLSRSVAK 572
            R  +ITG S G+G A A+ L K+G  V+   R+ DKL +L  ++ N D+   +  D+ +   V+ L   V++  G  DI VN AG + +++KI D   E +D+++DTN+KG+   L   +P       G +VN++S      +   A Y A+K AV     GL + +AK
Sbjct:    7 RVAIITGASSGIGAATAKALEKQGVKVVLAGRSHDKLNTLAKDM-NEDNIHIVPTDVTNQVEVDALVAKVIDVFGHVDIFVNCAGVM-RSSKITDYQVESWDSMVDTNIKGLLYSLNAILPKFEAQGSGHVVNLASISANEVSKESALYSATKSAVLMIFNGLEKELAK 173          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: CBR4_DANRE (Carbonyl reductase family member 4 OS=Danio rerio GN=cbr4 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.399e-16
Identity = 60/177 (33.90%), Postives = 92/177 (51.98%), Query Frame = 3
Query:   72 VSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKG--------IANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            +SR  ++ G SRG+GRA ++ LA+RGH ++  SR ++   S    LP  ++HL L+ D+     V++    + +  G    +VN AG IN++  +     E+  +V+ TN+ G        + NML H          G IVN+ S  G  G A    Y ASK  +EG +RS+AKEV
Sbjct:    1 MSRLAVVFGGSRGIGRAASKLLAQRGHRIVLLSRNKEAAQSTAQSLPG-ENHLGLSCDVSKEEEVQKAFETINKTCGTVGFLVNAAG-INRDALLLRSKSEDMLSVLHTNLLGSMLTCKAAVRNMLSH---------GGAIVNIGSVVGVKGNAGQCVYSASKAGLEGFTRSLAKEV 166          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: Y1385_MYCBO (Uncharacterized oxidoreductase Mb1385 OS=Mycobacterium bovis GN=fabG2 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.357e-16
Identity = 56/168 (33.33%), Postives = 87/168 (51.79%), Query Frame = 3
Query:   75 SRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            +RT +ITG ++GLG A+ Q     G  V+      +        L   D  L +  D+     V+ L R  VE+ G  D++VNNAG I ++  +  ++ E+FD VI  ++KG  N  R    +M   K+G IVNMSS  G+ G      Y A+K  + G++++ AKE+
Sbjct:    7 ARTAVITGGAQGLGLAIGQRFVAEGARVVLGDVNLEATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDVMVNNAG-ITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGKVGMVGQTNYSAAKAGIVGMTKAAAKEL 173          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: Y1350_MYCTU (Uncharacterized oxidoreductase Rv1350/MT1393 OS=Mycobacterium tuberculosis GN=fabG2 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.357e-16
Identity = 56/168 (33.33%), Postives = 87/168 (51.79%), Query Frame = 3
Query:   75 SRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            +RT +ITG ++GLG A+ Q     G  V+      +        L   D  L +  D+     V+ L R  VE+ G  D++VNNAG I ++  +  ++ E+FD VI  ++KG  N  R    +M   K+G IVNMSS  G+ G      Y A+K  + G++++ AKE+
Sbjct:    7 ARTAVITGGAQGLGLAIGQRFVAEGARVVLGDVNLEATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDVMVNNAG-ITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGKVGMVGQTNYSAAKAGIVGMTKAAAKEL 173          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: YDFG_ECOL6 (NADP-dependent L-serine/L-allo-threonine dehydrogenase ydfG OS=Escherichia coli O6 GN=ydfG PE=3 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.425e-15
Identity = 56/166 (33.73%), Postives = 88/166 (53.01%), Query Frame = 3
Query:   84 VLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEE-LARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            VL+TG + G G  + +   ++GH VI   R Q++L  L+ EL   D+     +D+R+ +++EE LA L  E   + DI+VNNAG           S E+++T+IDTN KG+  M R  +P M+    G I+N+ S  G    A    Y A+K  V   S ++  ++
Sbjct:    3 VLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG--DNLYIAQLDVRNRAAIEEMLASLPAEWSNI-DILVNNAGLALGMEPAHKASIEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDL 165          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: Y432_LISMO (Uncharacterized oxidoreductase Lmo0432 OS=Listeria monocytogenes GN=lmo0432 PE=3 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.425e-15
Identity = 53/168 (31.55%), Postives = 87/168 (51.79%), Query Frame = 3
Query:   75 SRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSL-QSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE 575
            ++ ++ITG S G+G+A A  LA++G  ++  +R  +KL  + Q+   N    +F   D+      ++L  L +E+ G  D I  NAG I  N+ +  +  +E++ +ID N+KG+ N +   +P  I  K G I+  SS  G       A Y A+KWAV  L   +  E
Sbjct:    5 NKVIIITGASSGIGKATALLLAEKGAKLVLAARRVEKLEKIVQTIKANSGEAIFAKTDVTKREDNKKLVELAIERYGKVDAIFLNAG-IMPNSPLSALKEDEWEQMIDINIKGVLNGIAAVLPSFIAQKSGHIIATSSVAGLKAYPGGAVYGATKWAVRDLMEVLRME 171          
The following BLAST results are available for this feature:
BLAST of FC868814 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
FABG_ECOLI1.989e-1732.933-oxoacyl-[acyl-carrier-protein] reductase OS=Esch... [more]
FABG_BUCAI4.431e-1732.933-oxoacyl-[acyl-carrier-protein] reductase OS=Buch... [more]
FABG_SALTY1.289e-1632.343-oxoacyl-[acyl-carrier-protein] reductase OS=Salm... [more]
FABG_SALTI1.289e-1632.343-oxoacyl-[acyl-carrier-protein] reductase OS=Salm... [more]
Y0585_STAHJ1.684e-1633.73Uncharacterized oxidoreductase SH0585 OS=Staphyloc... [more]
CBR4_DANRE6.399e-1633.90Carbonyl reductase family member 4 OS=Danio rerio ... [more]
Y1385_MYCBO8.357e-1633.33Uncharacterized oxidoreductase Mb1385 OS=Mycobacte... [more]
Y1350_MYCTU8.357e-1633.33Uncharacterized oxidoreductase Rv1350/MT1393 OS=My... [more]
YDFG_ECOL61.425e-1533.73NADP-dependent L-serine/L-allo-threonine dehydroge... [more]
Y432_LISMO1.425e-1531.55Uncharacterized oxidoreductase Lmo0432 OS=Listeria... [more]

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Properties
Property NameValue
Genbank descriptionC31005B02EF AbioticL1 Citrus clementina cDNA clone C31005B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868814 ID=FC868814; Name=FC868814; organism=Citrus clementina; type=EST; length=687bp
GGGGGAGAGGGAGGGAAATAACAATAACAACGATGGCAGCAACGACGCCG
TTTAACGGGATAGGGAAGAGCGTATCGCGAACAGTACTGATAACGGGAGT
GAGCAGAGGATTAGGGCGAGCCCTAGCTCAAGAGTTGGCCAAGCGCGGCC
ACACCGTGATCGGCTGCTCCCGCACTCAGGATAAGCTCACCTCCCTCCAA
TCAGAACTCCCTAATCCCGACCACCACCTCTTCCTCAATGTCGACATCAG
GTCAAATAGCAGTGTTGAAGAACTAGCACGTCTTGTCGTGGAGAAGAAAG
GCGTTCCTGATATTATAGTAAACAATGCAGGTACTATTAATAAAAATAAC
AAGATTTGGGATGTTTCGCCAGAAGAATTCGACACTGTTATTGATACTAA
TGTGAAAGGCATAGCAAATATGTTGCGTCACTTCATTCCTTTGATGATTC
CAATCAAGCAAGGGATTATCGTTAATATGTCTTCTGGTTGGGGAAGATCT
GGTGCTGCCCTGGTAGCACCTTATTGTGCTTCAAAATGGGCAGTTGAAGG
GTTGTCCAGATCAGTGGCAAAGGAGGTGCCTGATGGGATGGCAATTGTTG
CTTTAATCCTGGTGTTATTACACTGACATGCTTACGTCCTGCTTTGGCAC
TTCTGCTGCATCATACCAGCACCTGATGCATGGGCTT
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