FC868814

Overview
NameFC868814
Unique NameFC868814
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig7605 contig Ccv1_Contig7605:12..700. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: YQ53_SCHPO (Uncharacterized oxidoreductase C162.03 OS=Schizosaccharomyces pombe GN=SPCC162.03 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.417e-15
Identity = 61/172 (35.47%), Postives = 92/172 (53.49%), Query Frame = 3
Query:   66 KSVSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPI-KQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            KS   TVLITG S+GLG AL +    +G+ VI CSR  D +T   S+L      L L +D+    SVE   +    + G  DI++NNAG      +    + EE    ++ N  G+A + +  + LM    K G I+ +SS  G   +  ++ Y ASK+AVEGLS+++ +E+
Sbjct:    2 KSTFSTVLITGSSKGLGYALVKVGLAQGYNVIACSRAPDTITIEHSKL------LKLKLDVTDVKSVETAFKDAKRRFGNVDIVINNAG-YGLVGEFESYNIEEMHRQMNVNFWGVAYITKEALNLMRESGKGGRILQISSVAGYYPSPCLSMYNASKFAVEGLSQTIMREL 166          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: YDFG_SALTY (NADP-dependent L-serine/L-allo-threonine dehydrogenase ydfG OS=Salmonella typhimurium GN=ydfG PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.075e-15
Identity = 51/165 (30.91%), Postives = 88/165 (53.33%), Query Frame = 3
Query:   84 VLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            VL+TG + G G  +A+   + GH VI   R  ++L +L+ EL   ++ L   +D+R+ +++EE+   +  +    D++VNNAG           S E+++T+IDTN KG+  M R  +P M+   +G I+N+ S  G    A    Y A+K  V   S ++  ++
Sbjct:    3 VLVTGATAGFGECIARRFVENGHKVIATGRRHERLQALKDELG--ENVLTAQLDVRNRAAIEEMMASLPAQWRDIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLIYMTRAVLPGMVERNRGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDL 165          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: YDFG_SALTI (NADP-dependent L-serine/L-allo-threonine dehydrogenase ydfG OS=Salmonella typhi GN=ydfG PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.075e-15
Identity = 51/165 (30.91%), Postives = 88/165 (53.33%), Query Frame = 3
Query:   84 VLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            VL+TG + G G  +A+   + GH VI   R  ++L +L+ EL   ++ L   +D+R+ +++EE+   +  +    D++VNNAG           S E+++T+IDTN KG+  M R  +P M+   +G I+N+ S  G    A    Y A+K  V   S ++  ++
Sbjct:    3 VLVTGATAGFGECIARRFVENGHKVIATGRRHERLQALKDELG--ENVLTAQLDVRNRAAIEEMMASLPAQWRDIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLIYMTRAVLPGMVERNRGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDL 165          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: Y2567_STAAR (Uncharacterized oxidoreductase SAR2567 OS=Staphylococcus aureus (strain MRSA252) GN=SAR2567 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.075e-15
Identity = 48/167 (28.74%), Postives = 90/167 (53.89%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            +  ++TG   G+G A+A  L + G  V+   R +DKL ++ ++L   D    +  D+     V+EL ++  +  G  DI++N+AG +  ++KI D   +E+D++ID N+KG     +  +P M+    G ++N++S  G         Y A+K AV  +++ + KE+
Sbjct:    7 KIAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKDKLQNVANQLAQ-DSVKVVPTDVTKKEEVDELIKMAQQTFGGLDIVINSAGQM-LSSKITDYQVDEWDSMIDVNIKGTLYTAKAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKEL 171          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: Y2478_STAAM (Uncharacterized oxidoreductase SAV2478 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV2478 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.075e-15
Identity = 48/167 (28.74%), Postives = 91/167 (54.49%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            +  ++TG   G+G A+A  L + G  V+   R +DKL ++ ++L   D    +  D+ +   V+EL ++  +  G  DI++N+AG +  ++KI D   +E+D++ID N+KG     +  +P M+    G ++N++S  G         Y A+K AV  +++ + KE+
Sbjct:    7 KIAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKDKLQNVANQLAQ-DSVKVVPTDVTNKEEVDELMKIAQQTFGGLDIVINSAGQM-LSSKITDYQVDEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKEL 171          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: Y2266_STAAN (Uncharacterized oxidoreductase SA2266 OS=Staphylococcus aureus (strain N315) GN=SA2266 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.075e-15
Identity = 48/167 (28.74%), Postives = 91/167 (54.49%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            +  ++TG   G+G A+A  L + G  V+   R +DKL ++ ++L   D    +  D+ +   V+EL ++  +  G  DI++N+AG +  ++KI D   +E+D++ID N+KG     +  +P M+    G ++N++S  G         Y A+K AV  +++ + KE+
Sbjct:    7 KIAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKDKLQNVANQLAQ-DSVKVVPTDVTNKEEVDELMKIAQQTFGGLDIVINSAGQM-LSSKITDYQVDEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKEL 171          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: Y2403_STAAW (Uncharacterized oxidoreductase MW2403 OS=Staphylococcus aureus (strain MW2) GN=MW2403 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.240e-15
Identity = 47/167 (28.14%), Postives = 93/167 (55.69%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            +  ++TG   G+G A+A  L + G  V+   R ++KL ++ ++L + D    +  D+ +   V+EL ++  +  G  DI++N+AG +  ++KI D   +E+D++ID N+KG    ++  +P M+    G ++N++S  G         Y A+K AV  +++ + KE+
Sbjct:    7 KIAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKEKLQNVANQL-SQDSVKVVPTDVTNKEEVDELIKIAQQTFGGLDIVINSAGQM-LSSKITDYQVDEWDSMIDVNIKGTLYTVQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKEL 171          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: Y2370_STAAS (Uncharacterized oxidoreductase SAS2370 OS=Staphylococcus aureus (strain MSSA476) GN=SAS2370 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.240e-15
Identity = 47/167 (28.14%), Postives = 93/167 (55.69%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            +  ++TG   G+G A+A  L + G  V+   R ++KL ++ ++L + D    +  D+ +   V+EL ++  +  G  DI++N+AG +  ++KI D   +E+D++ID N+KG    ++  +P M+    G ++N++S  G         Y A+K AV  +++ + KE+
Sbjct:    7 KIAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKEKLQNVANQL-SQDSVKVVPTDVTNKEEVDELIKIAQQTFGGLDIVINSAGQM-LSSKITDYQVDEWDSMIDVNIKGTLYTVQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKEL 171          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: SDH_AGRT5 (Serine 3-dehydrogenase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=sdh PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.240e-15
Identity = 47/138 (34.06%), Postives = 77/138 (55.80%), Query Frame = 3
Query:   72 VSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSS 485
            +S T+LITG + G G+A A+   K G  VIG  R  ++L +L +EL    H +    DI    + E+    + +     DI+VNNAG          V+ +++ T++DTN+ G+ N+  H +P +I  ++GI+VN+SS
Sbjct:    1 MSGTILITGATSGFGQATARRFVKEGWKVIGTGRRAERLEALAAELGQAFHGIAF--DITDEDATEKALAALPDGFRDIDILVNNAGLALGTAPAPQVALKDWQTMVDTNITGLLNITHHLLPTLIK-QKGIVVNLSS 135          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: FABG_BUCAP (3-oxoacyl-[acyl-carrier-protein] reductase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=fabG PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.240e-15
Identity = 56/171 (32.75%), Postives = 91/171 (53.22%), Query Frame = 3
Query:   66 KSVSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            K   +T L+TG ++GLG+ +A +L+++G  VIG S T D + ++   L        L  D++   S+ E  + + +KK   DI++NNAG I  +N +  +S +E++ VI  N+  +  M +  I  MI  + G IV + S  G  G      Y ASK  + G  +S+A EV
Sbjct:    2 KIEKKTALVTGANQGLGKEIAIKLSQKGIQVIGTSTTVDGVKTINKYLKKNGFGFIL--DLKDTDSILEKMKEICQKKYSIDILINNAG-ITSDNLLVYMSNKEWENVIKINLTSVFYMSKSVIRSMIKKRYGRIVTIGSVIGYLGNRGQINYSASKSGLIGFHKSLALEV 169          
The following BLAST results are available for this feature:
BLAST of FC868814 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
YQ53_SCHPO5.417e-1535.47Uncharacterized oxidoreductase C162.03 OS=Schizosa... [more]
YDFG_SALTY7.075e-1530.91NADP-dependent L-serine/L-allo-threonine dehydroge... [more]
YDFG_SALTI7.075e-1530.91NADP-dependent L-serine/L-allo-threonine dehydroge... [more]
Y2567_STAAR7.075e-1528.74Uncharacterized oxidoreductase SAR2567 OS=Staphylo... [more]
Y2478_STAAM7.075e-1528.74Uncharacterized oxidoreductase SAV2478 OS=Staphylo... [more]
Y2266_STAAN7.075e-1528.74Uncharacterized oxidoreductase SA2266 OS=Staphyloc... [more]
Y2403_STAAW9.240e-1528.14Uncharacterized oxidoreductase MW2403 OS=Staphyloc... [more]
Y2370_STAAS9.240e-1528.14Uncharacterized oxidoreductase SAS2370 OS=Staphylo... [more]
SDH_AGRT59.240e-1534.06Serine 3-dehydrogenase OS=Agrobacterium tumefacien... [more]
FABG_BUCAP9.240e-1532.753-oxoacyl-[acyl-carrier-protein] reductase OS=Buch... [more]

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Properties
Property NameValue
Genbank descriptionC31005B02EF AbioticL1 Citrus clementina cDNA clone C31005B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868814 ID=FC868814; Name=FC868814; organism=Citrus clementina; type=EST; length=687bp
GGGGGAGAGGGAGGGAAATAACAATAACAACGATGGCAGCAACGACGCCG
TTTAACGGGATAGGGAAGAGCGTATCGCGAACAGTACTGATAACGGGAGT
GAGCAGAGGATTAGGGCGAGCCCTAGCTCAAGAGTTGGCCAAGCGCGGCC
ACACCGTGATCGGCTGCTCCCGCACTCAGGATAAGCTCACCTCCCTCCAA
TCAGAACTCCCTAATCCCGACCACCACCTCTTCCTCAATGTCGACATCAG
GTCAAATAGCAGTGTTGAAGAACTAGCACGTCTTGTCGTGGAGAAGAAAG
GCGTTCCTGATATTATAGTAAACAATGCAGGTACTATTAATAAAAATAAC
AAGATTTGGGATGTTTCGCCAGAAGAATTCGACACTGTTATTGATACTAA
TGTGAAAGGCATAGCAAATATGTTGCGTCACTTCATTCCTTTGATGATTC
CAATCAAGCAAGGGATTATCGTTAATATGTCTTCTGGTTGGGGAAGATCT
GGTGCTGCCCTGGTAGCACCTTATTGTGCTTCAAAATGGGCAGTTGAAGG
GTTGTCCAGATCAGTGGCAAAGGAGGTGCCTGATGGGATGGCAATTGTTG
CTTTAATCCTGGTGTTATTACACTGACATGCTTACGTCCTGCTTTGGCAC
TTCTGCTGCATCATACCAGCACCTGATGCATGGGCTT
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