FC868814

Overview
NameFC868814
Unique NameFC868814
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig7605 contig Ccv1_Contig7605:12..700. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: Y452_LISIN (Uncharacterized oxidoreductase Lin0452 OS=Listeria innocua GN=lin0452 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.207e-14
Identity = 52/168 (30.95%), Postives = 86/168 (51.19%), Query Frame = 3
Query:   75 SRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSL-QSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE 575
            ++ ++ITG S G+G A A  LA++G  ++  +R  +KL  + Q+   +    +F   D+      ++L  L +E+ G  D I  NAG I  N+ +  +  +E++ +ID N+KG+ N +   +P  I  K G I+  SS  G       A Y A+KWAV  L   +  E
Sbjct:    5 NKVIIITGASSGIGEATAILLAEKGAKLVLAARRVEKLEKIVQTIKASSGEAIFAKTDVTKREDNKKLVELAIERYGKVDAIFLNAG-IMPNSPLSALKEDEWEQMIDINIKGVLNGIAAVLPSFIAQKSGHIIATSSVAGLKAYPGGAVYGATKWAVRDLMEVLRME 171          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: Y2778_STAA8 (Uncharacterized oxidoreductase SAOUHSC_02778 OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_02778 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.207e-14
Identity = 47/167 (28.14%), Postives = 92/167 (55.09%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            +  ++TG   G+G A+A  L + G  V+   R ++KL ++ ++L + D    +  D+ +   V+EL ++  +  G  DI++N+AG +  ++KI D   +E+D++ID N+KG     +  +P M+    G ++N++S  G         Y A+K AV  +++ + KE+
Sbjct:    7 KVAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKEKLQNVANQL-SQDSVKVVPTDVTNKEEVDELIKIAQQTFGGLDIVINSAGQM-LSSKITDYQVDEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKEL 171          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: Y2488_STAAC (Uncharacterized oxidoreductase SACOL2488 OS=Staphylococcus aureus (strain COL) GN=SACOL2488 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.207e-14
Identity = 47/167 (28.14%), Postives = 92/167 (55.09%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            +  ++TG   G+G A+A  L + G  V+   R ++KL ++ ++L + D    +  D+ +   V+EL ++  +  G  DI++N+AG +  ++KI D   +E+D++ID N+KG     +  +P M+    G ++N++S  G         Y A+K AV  +++ + KE+
Sbjct:    7 KVAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKEKLQNVANQL-SQDSVKVVPTDVTNKEEVDELIKIAQQTFGGLDIVINSAGQM-LSSKITDYQVDEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKEL 171          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: Y2422_STAA3 (Uncharacterized oxidoreductase SAUSA300_2422 OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_2422 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.207e-14
Identity = 47/167 (28.14%), Postives = 92/167 (55.09%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            +  ++TG   G+G A+A  L + G  V+   R ++KL ++ ++L + D    +  D+ +   V+EL ++  +  G  DI++N+AG +  ++KI D   +E+D++ID N+KG     +  +P M+    G ++N++S  G         Y A+K AV  +++ + KE+
Sbjct:    7 KVAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKEKLQNVANQL-SQDSVKVVPTDVTNKEEVDELIKIAQQTFGGLDIVINSAGQM-LSSKITDYQVDEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKEL 171          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: DHK1_STRVN (Granaticin polyketide synthase putative ketoacyl reductase 1 OS=Streptomyces violaceoruber GN=gra-orf5 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.207e-14
Identity = 55/189 (29.10%), Postives = 92/189 (48.68%), Query Frame = 3
Query:   21 TITTMAATTPFNGIGKSVSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNV-DIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPL--MIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            T T  A  TP    G +     L+TG + G+G A+A+ LA  G     C+R +++L     EL      +   V D+   + +       V++ G  DI+VNNAG  +      +++ E +  VI TN+  +  M +  +    M+  K+G I+N++S  G+ G     PY ASK  V GL++++  E+
Sbjct:    3 TATATATATP----GTAAKPVALVTGATSGIGLAIARRLAALGARTFLCARDEERLAQTVKELRGEGFDVDGTVCDVADPAQIRAYVAAAVQRYGTVDILVNNAGR-SGGGATAEIADELWLDVITTNLTSVFLMTKEVLNAGGMLAKKRGRIINIASTGGKQGVVHAVPYSASKHGVVGLTKALGLEL 186          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: ACT3_STRCO (Putative ketoacyl reductase OS=Streptomyces coelicolor GN=actIII PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.207e-14
Identity = 53/171 (30.99%), Postives = 87/171 (50.88%), Query Frame = 3
Query:   75 SRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHL-FLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPL--MIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            S   L+TG + G+G  +A+ L K G  V  C+R ++ L +   EL            D+RS   +E L   VVE+ G  D++VNNAG         +++ E +  V++TN+ G+  + +  +    M+    G IVN++S  G+ G    APY ASK  V G ++++  E+
Sbjct:    6 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPG-GGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLEL 175          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: HSD_STREX (3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase OS=Streptomyces exfoliatus PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.576e-14
Identity = 60/170 (35.29%), Postives = 87/170 (51.18%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVV---EKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            +TV+ITG +RGLG   A++    G  V+      ++  +   EL +   +  L+V I      E+  R+V    E+ G  D +VNNAG I+    +   S E F  V+D N+ G+   ++  IP M     G IVN+SS  G  G AL + Y ASKW V GLS+  A E+
Sbjct:    7 KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIE-----EDWQRVVAYAREEFGSVDGLVNNAG-ISTGMFLETESVERFRKVVDINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVEL 170          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: SDH_RHIRD (Serine 3-dehydrogenase OS=Rhizobium radiobacter GN=sdh PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.058e-14
Identity = 47/138 (34.06%), Postives = 80/138 (57.97%), Query Frame = 3
Query:   72 VSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSS 485
            +S T+LITG + G G+A AQ   K G  VIG  R  ++L +L +EL +  H +  ++     ++ + LA L    + + DI+VNNAG          V  +++ T++DTN+ G+ N+  H +P +I  ++GI++N+SS
Sbjct:    1 MSGTILITGATSGFGQATAQRFVKEGWKVIGTGRRAERLEALSAELGSAFHGVAFDI-TDEEATKKALAGLPDGFRDI-DILVNNAGLALGTAPAPQVPLKDWQTMVDTNITGLLNVTHHLLPTLIE-RKGIVINLSS 135          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: FABG_RICPR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia prowazekii GN=fabG PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 2.688e-14
Identity = 58/167 (34.73%), Postives = 93/167 (55.69%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            +T LITG S G+G A+A+ L K G  VI     ++KL SL + L +        +++ + ++ EE + L+ +   + DI+V NAG I  +     +  ++FD VID N+K    + R  I  MI  + G I+N+SS  G +G    A YCASK  + G+++S++ EV
Sbjct:    7 KTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDN-----YTIEVCNLANKEECSNLISKTSNL-DILVCNAG-ITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEV 166          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: FABG5_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 5, chloroplastic (Fragment) OS=Brassica napus GN=bkr1 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.688e-14
Identity = 52/184 (28.26%), Postives = 94/184 (51.09%), Query Frame = 3
Query:   30 TMAATTPFNGIGKSVSRTVLITGVSRGLGRALAQELAKRGHTV-IGCSRTQDKLTSLQSELPN-PDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE 575
            T    T    + K  S  V++TG SRG+G+A+A  L K G  V +  +R+  +   +  ++       +    D+   + V+ + +  V+K G  D++VNNAG I ++  +  +   ++D VID N+ G+    +    +M+  ++G I+N++S  G  G    A Y A+K  V G S++ A+E
Sbjct:   59 TATEQTTEEAVPKVESPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKEAEEVSKQIEEYGGEAITFGGDVSKEADVDSMMKTAVDKWGTIDVVVNNAG-ITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAARE 241          
The following BLAST results are available for this feature:
BLAST of FC868814 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
Y452_LISIN1.207e-1430.95Uncharacterized oxidoreductase Lin0452 OS=Listeria... [more]
Y2778_STAA81.207e-1428.14Uncharacterized oxidoreductase SAOUHSC_02778 OS=St... [more]
Y2488_STAAC1.207e-1428.14Uncharacterized oxidoreductase SACOL2488 OS=Staphy... [more]
Y2422_STAA31.207e-1428.14Uncharacterized oxidoreductase SAUSA300_2422 OS=St... [more]
DHK1_STRVN1.207e-1429.10Granaticin polyketide synthase putative ketoacyl r... [more]
ACT3_STRCO1.207e-1430.99Putative ketoacyl reductase OS=Streptomyces coelic... [more]
HSD_STREX1.576e-1435.293-alpha-(or 20-beta)-hydroxysteroid dehydrogenase ... [more]
SDH_RHIRD2.058e-1434.06Serine 3-dehydrogenase OS=Rhizobium radiobacter GN... [more]
FABG_RICPR2.688e-1434.733-oxoacyl-[acyl-carrier-protein] reductase OS=Rick... [more]
FABG5_BRANA2.688e-1428.263-oxoacyl-[acyl-carrier-protein] reductase 5, chlo... [more]

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Properties
Property NameValue
Genbank descriptionC31005B02EF AbioticL1 Citrus clementina cDNA clone C31005B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868814 ID=FC868814; Name=FC868814; organism=Citrus clementina; type=EST; length=687bp
GGGGGAGAGGGAGGGAAATAACAATAACAACGATGGCAGCAACGACGCCG
TTTAACGGGATAGGGAAGAGCGTATCGCGAACAGTACTGATAACGGGAGT
GAGCAGAGGATTAGGGCGAGCCCTAGCTCAAGAGTTGGCCAAGCGCGGCC
ACACCGTGATCGGCTGCTCCCGCACTCAGGATAAGCTCACCTCCCTCCAA
TCAGAACTCCCTAATCCCGACCACCACCTCTTCCTCAATGTCGACATCAG
GTCAAATAGCAGTGTTGAAGAACTAGCACGTCTTGTCGTGGAGAAGAAAG
GCGTTCCTGATATTATAGTAAACAATGCAGGTACTATTAATAAAAATAAC
AAGATTTGGGATGTTTCGCCAGAAGAATTCGACACTGTTATTGATACTAA
TGTGAAAGGCATAGCAAATATGTTGCGTCACTTCATTCCTTTGATGATTC
CAATCAAGCAAGGGATTATCGTTAATATGTCTTCTGGTTGGGGAAGATCT
GGTGCTGCCCTGGTAGCACCTTATTGTGCTTCAAAATGGGCAGTTGAAGG
GTTGTCCAGATCAGTGGCAAAGGAGGTGCCTGATGGGATGGCAATTGTTG
CTTTAATCCTGGTGTTATTACACTGACATGCTTACGTCCTGCTTTGGCAC
TTCTGCTGCATCATACCAGCACCTGATGCATGGGCTT
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