FC868814

Overview
NameFC868814
Unique NameFC868814
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig7605 contig Ccv1_Contig7605:12..700. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: Y4MP_RHISN (Uncharacterized short-chain type dehydrogenase/reductase y4mP OS=Rhizobium sp. (strain NGR234) GN=NGR_a02430 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.972e-13
Identity = 55/178 (30.90%), Postives = 92/178 (51.69%), Query Frame = 3
Query:   78 RTVLITGVS--RGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDH--HLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVA--PYCASKWAVEGLSRSVAKEV-PDGM 590
            +T +I+G +  RG+GRA A+  A  G  V       D+  +   +LP  +H  H+ L  D+   +S    +  V+   GV +I++NNAG I +  K  D+S  ++  ++  N+ G+ N+ + FIP M     G I  MSS   + G  +     Y A+K  V GL++++A+E  PD +
Sbjct:    6 KTAVISGAASKRGIGRATAELFASHGARVAILDINADEAKAAAGDLPPVEHGAHIGLRCDVADRASCTSASDEVLSAFGVANILINNAG-ITQPVKTLDISDADWQRIVAVNMTGVLNLSQVFIPNMRQNGGGSIACMSSVSAQRGGGIFGGPHYSAAKAGVLGLAKAMAREFGPDSI 182          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: FABG_BUCBP (3-oxoacyl-[acyl-carrier-protein] reductase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=fabG PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.972e-13
Identity = 52/177 (29.38%), Postives = 96/177 (54.24%), Query Frame = 3
Query:   66 KSVSRTVLITGVSRGLGRALAQELAKRGH-TVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGM 590
            K+  +  +ITG +RGLG+ +A+EL+   + TVIG S +Q     +   L N  + + + +DI + + + +    V +  G  DI++NNAG I ++  + ++  +++++V++ N+  I  M +  I  MI  KQG I+ + S     G      Y A+K  + G  +S+A E+ P G+
Sbjct:    2 KTTKKIAVITGANRGLGKGIAEELSNTNNITVIGTSTSQKGCKIINKYLKN--NGIGIKLDITNPNEITKTMDFVYKNFGRVDILINNAGII-RDKLLINMKTQDWNSVLNVNLNSIFYMSKSVIRNMIKNKQGKIITIGSVIAHIGNCGQTNYSAAKLGLVGFHKSLALELAPKGI 175          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: FABG_ARATH (3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic OS=Arabidopsis thaliana GN=At1g24360 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 2.972e-13
Identity = 52/184 (28.26%), Postives = 94/184 (51.09%), Query Frame = 3
Query:   30 TMAATTPFNGIGKSVSRTVLITGVSRGLGRALAQELAKRGHTV-IGCSRTQDKLTSLQSELPN-PDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE 575
            T    +P   + K  S  V+ITG SRG+G+A+A  L K G  V +  +R+  +   +  ++       +    D+   + V+ + +  ++K G  D++VNNAG I ++  +  +   ++D VI  N+ G+    +  + +M+  K+G I+N+SS  G  G    A Y A+K  V   S++ A+E
Sbjct:   61 TATEQSPGEVVQKVESPVVVITGASRGIGKAIALALGKAGCKVLVNYARSAKEAEEVAKQIEEYGGQAITFGGDVSKATDVDAMMKTALDKWGTIDVVVNNAG-ITRDTLLIRMKQSQWDEVIALNLTGVFLCTQAAVKIMMKKKRGRIINISSVVGLIGNIGQANYAAAKGGVISFSKTAARE 243          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: NODG_RHIS3 (Nodulation protein G OS=Rhizobium sp. (strain N33) GN=nodG PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.882e-13
Identity = 53/168 (31.55%), Postives = 90/168 (53.57%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQ-DKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            R  L+TG S G+G A+A+ L  +G  ++G   T+ +KL +L +EL   D       ++ +   V+ L +         DI+VNNAG I K+     +S  ++DTV++ N+  +  + R     M+  + G I+N++S  G +G      YCASK  + G S+S+A+E+
Sbjct:    7 RKALVTGASGGIGEAIARVLHAQG-AIVGLHGTRVEKLETLAAELG--DRVKLFPANLSNRDEVKALGQKAEADLEGVDILVNNAG-ITKDGLFVRMSDADWDTVLEVNLTAVFRLTRELTHPMMRRRHGRIINITSVVGVTGNPGQTNYCASKAGMIGFSKSLAQEI 170          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: BAIA2_EUBSP (Bile acid 7-dehydroxylase 2 OS=Eubacterium sp. (strain VPI 12708) GN=baiA2 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.882e-13
Identity = 54/170 (31.76%), Postives = 85/170 (50.00%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPN---PDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            +  +ITG +RG+G A A+     G  V     TQ+++ +  ++L      +  L    D+ S  +V      V +K G  D+++NNAG I  NN    VS EEF  ++D NV G+ N        M   K+G+I+N +S  G  G+     Y ASK +V GL+  + +E+
Sbjct:    7 KVTIITGGTRGIGFAAAKIFIDNGAKVSIFGETQEEVDTALAQLKELYPEEEVLGFAPDLTSRDAVMAAVGQVAQKYGRLDVMINNAG-ITSNNVFSRVSEEEFKHIMDINVTGVFNGAWCAYQCMKDAKKGVIINTASVTGIFGSLSGVGYPASKASVIGLTHGLGREI 175          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: YCIK_ECOLI (Uncharacterized oxidoreductase yciK OS=Escherichia coli (strain K12) GN=yciK PE=1 SV=3)

HSP 1 Score: 74.3294 bits (181), Expect = 6.622e-13
Identity = 49/170 (28.82%), Postives = 85/170 (50.00%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQS----ELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE 575
            R +L+TG S G+GR  A   A+ G TVI   R ++KL  + S    E         L++   ++ + ++LA+ +       D +++NAG +     + + +P+ +  V+  NV     + +  +PL++    G +V  SS  GR G A    Y ASK+A EG+ + +A E
Sbjct:   13 RIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADE 182          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: Y1430_HAEIN (Probable NADP-dependent dehydrogenase HI1430 OS=Haemophilus influenzae GN=HI1430 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.622e-13
Identity = 44/135 (32.59%), Postives = 70/135 (51.85%), Query Frame = 3
Query:   81 TVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSS 485
            T L+TG + G G A+ ++L + G+ VIG  R  D+L  + S+L N  + L L  DIR   +       + E     D++VNNAG             +++  +IDTN+KG+  + R  +P M+    G I+N+SS
Sbjct:    5 TALVTGATAGFGLAICKKLIEAGYKVIGTGRRADRLAEIHSQLGN--NFLPLAFDIRDEQATINALNTLPEGWQAVDLLVNNAGLALGLEPAHKADLQDWYQMIDTNIKGLVTITRLVLPNMVARNYGQIINLSS 137          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: FABG_CHLPN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Chlamydia pneumoniae GN=fabG PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.622e-13
Identity = 53/176 (30.11%), Postives = 91/176 (51.70%), Query Frame = 3
Query:   72 VSRTVLITGVSRGLGRALAQELAKRGHTV----IGCSRTQ---DKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            V + V++TG SRG+G  + +   + G  V    +   R Q   + LT L  E+       F  VD+  N  V++  +  ++K    DI+VNNAG I ++N +  +S +++ +VI TN+  +       I  MI  + G I+N++S   + G+A    Y A+K  +   ++S+AKEV
Sbjct:    6 VGKKVIVTGGSRGIGLGIVKLFLENGADVEIWGLNEERGQAVIESLTGLGGEVS------FARVDVSHNGGVKDCVQKFLDKHNKIDILVNNAG-ITRDNLLMRMSEDDWQSVISTNLTSLYYTCSSVIRHMIKARSGSIINVASIVAKIGSAGQTNYAAAKAGIIAFTKSLAKEV 174          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: FABG2_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 2, chloroplastic OS=Brassica napus GN=bkr2 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.622e-13
Identity = 53/175 (30.29%), Postives = 90/175 (51.43%), Query Frame = 3
Query:   60 IGKSVSRTVLITGVSRGLGRALAQELAKRGHTVI---GCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE 575
            + K  S  V++TG SRG+G+A+A  L K G  V+     S  + +  S Q E        F   D+   + V+ + +  V+  G  D++VNNAG I ++  +  +   ++D VID N+ G+    +    +M+  ++G I+N++S  G  G    A Y A+K  V G S++ A+E
Sbjct:   80 VPKVESPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKEAEQVSKQIEAYGGQAITF-GGDVSKEADVDAMMKTAVDAWGTIDVVVNNAG-ITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAARE 252          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: DHRS7_MOUSE (Dehydrogenase/reductase SDR family member 7 OS=Mus musculus GN=Dhrs7 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 6.622e-13
Identity = 52/170 (30.59%), Postives = 93/170 (54.71%), Query Frame = 3
Query:   84 VLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSE-LPNPDHH----LFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            V +TG S G+G  LA +L+K G +++  +R   +L  ++   L N +      L L +D+   SS E   + V+++ G  DI+VNN G  ++ + + + + + F  +I+ N  G  ++ +  +P MI  KQG IV ++S  G +  +L + YCASK A+ G   ++  E+
Sbjct:   53 VWVTGASSGIGEELAFQLSKLGVSLVLSARRAQELERVKRRCLENGNLKEKDILVLPLDLTDTSSHEAATKAVLQEFGKIDILVNNGGR-SQRSLVLETNLDVFKELINLNYIGTVSLTKCVLPHMIERKQGKIVTVNSIAGIASVSLSSGYCASKHALRGFFNALHSEL 221          
The following BLAST results are available for this feature:
BLAST of FC868814 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
Y4MP_RHISN2.972e-1330.90Uncharacterized short-chain type dehydrogenase/red... [more]
FABG_BUCBP2.972e-1329.383-oxoacyl-[acyl-carrier-protein] reductase OS=Buch... [more]
FABG_ARATH2.972e-1328.263-oxoacyl-[acyl-carrier-protein] reductase, chloro... [more]
NODG_RHIS33.882e-1331.55Nodulation protein G OS=Rhizobium sp. (strain N33)... [more]
BAIA2_EUBSP3.882e-1331.76Bile acid 7-dehydroxylase 2 OS=Eubacterium sp. (st... [more]
YCIK_ECOLI6.622e-1328.82Uncharacterized oxidoreductase yciK OS=Escherichia... [more]
Y1430_HAEIN6.622e-1332.59Probable NADP-dependent dehydrogenase HI1430 OS=Ha... [more]
FABG_CHLPN6.622e-1330.113-oxoacyl-[acyl-carrier-protein] reductase OS=Chla... [more]
FABG2_BRANA6.622e-1330.293-oxoacyl-[acyl-carrier-protein] reductase 2, chlo... [more]
DHRS7_MOUSE6.622e-1330.59Dehydrogenase/reductase SDR family member 7 OS=Mus... [more]

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Properties
Property NameValue
Genbank descriptionC31005B02EF AbioticL1 Citrus clementina cDNA clone C31005B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868814 ID=FC868814; Name=FC868814; organism=Citrus clementina; type=EST; length=687bp
GGGGGAGAGGGAGGGAAATAACAATAACAACGATGGCAGCAACGACGCCG
TTTAACGGGATAGGGAAGAGCGTATCGCGAACAGTACTGATAACGGGAGT
GAGCAGAGGATTAGGGCGAGCCCTAGCTCAAGAGTTGGCCAAGCGCGGCC
ACACCGTGATCGGCTGCTCCCGCACTCAGGATAAGCTCACCTCCCTCCAA
TCAGAACTCCCTAATCCCGACCACCACCTCTTCCTCAATGTCGACATCAG
GTCAAATAGCAGTGTTGAAGAACTAGCACGTCTTGTCGTGGAGAAGAAAG
GCGTTCCTGATATTATAGTAAACAATGCAGGTACTATTAATAAAAATAAC
AAGATTTGGGATGTTTCGCCAGAAGAATTCGACACTGTTATTGATACTAA
TGTGAAAGGCATAGCAAATATGTTGCGTCACTTCATTCCTTTGATGATTC
CAATCAAGCAAGGGATTATCGTTAATATGTCTTCTGGTTGGGGAAGATCT
GGTGCTGCCCTGGTAGCACCTTATTGTGCTTCAAAATGGGCAGTTGAAGG
GTTGTCCAGATCAGTGGCAAAGGAGGTGCCTGATGGGATGGCAATTGTTG
CTTTAATCCTGGTGTTATTACACTGACATGCTTACGTCCTGCTTTGGCAC
TTCTGCTGCATCATACCAGCACCTGATGCATGGGCTT
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