FC868818
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868818 vs. ExPASy Swiss-Prot
Match: CAF1E_ARATH (Probable CCR4-associated factor 1 homolog 5 OS=Arabidopsis thaliana GN=CAF1-5 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.697e-13 Identity = 54/170 (31.76%), Postives = 77/170 (45.29%), Query Frame = 3 Query: 177 EVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDIATDAHAPDSIELLRLQGIDFERNRKEGVDSVRFAELMMSSGLVCNE---SVSWVTFHSAYDFGYLV 677 EVW N ++E I + I++DTEFPG + +D S Y+ +K NVD +LIQ+GLTL G G WE N DF+ + SI L+ G+D ++ R+EG+ E M + NE + WVTF +YD YL+ Sbjct: 4 EVWRWNKQAEMNSIRDCLKHCNSIAIDTEFPGCLKETPMDAS---------DEIRYRDMKFNVDNTHLIQLGLTL---------FGKGITK--TWEINLSDFNESKSLKNDKSIAFLKNNGLDLDKIREEGIG---IEEFFMEFSQILNEKHGKMRWVTFQGSYDKAYLL 150
BLAST of FC868818 vs. ExPASy Swiss-Prot
Match: CAF1C_ARATH (Putative CCR4-associated factor 1 homolog 3 OS=Arabidopsis thaliana GN=CAF1-3 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.876e-12 Identity = 51/167 (30.54%), Postives = 71/167 (42.51%), Query Frame = 3 Query: 177 EVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDIATDAHAPDSIELLRLQGIDFERNRKEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLV 677 EVW N E E I + I++DTEFPG + +D S Y+ +K NVD +LIQ+G TL D G WE N DFD SI L+ G++ ++ R+EG+ F + ++WV F +YD YLV Sbjct: 8 EVWRWNKEVEMNSIRDCLKHCSSIAIDTEFPGCLKETPMDAS---------EEIRYRDMKFNVDNTHLIQLGFTLFDRRGFAK----------TWEINLSDFDEHKCFKNDKSIAFLKSNGLNLDKIREEGIGIDEFFRDFSQILTEKDGKITWVNFQGSYDNAYLV 155
BLAST of FC868818 vs. ExPASy Swiss-Prot
Match: CAF1D_ARATH (Putative CCR4-associated factor 1 homolog 4 OS=Arabidopsis thaliana GN=CAF1-4 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.130e-12 Identity = 49/167 (29.34%), Postives = 72/167 (43.11%), Query Frame = 3 Query: 177 EVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDIATDAHAPDSIELLRLQGIDFERNRKEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLV 677 EVW N E E + I + + I++DTEFPG + +D S Y+ +K NVD +LIQ+G TL D G WE N DF+ SI L+ G++ ++ +EG+ F + ++WV F +YD YLV Sbjct: 3 EVWRWNKEVEMDSIRDCLKHFSSIAIDTEFPGCLKETPMDAS---------EEIRYRDMKFNVDNTHLIQLGFTLFDRRGITK----------TWEINLSDFNEHKCFKNDKSIAFLKSNGLNLDKIGEEGIGIEEFFRDFSQILKEKDGKITWVNFQGSYDNAYLV 150 The following BLAST results are available for this feature:
BLAST of FC868818 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868818 ID=FC868818; Name=FC868818; organism=Citrus clementina; type=EST; length=677bpback to top |