FC868819
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: SPB4_ASPOR (ATP-dependent rRNA helicase spb4 OS=Aspergillus oryzae GN=spb4 PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 7.441e-41 Identity = 99/229 (43.23%), Postives = 132/229 (57.64%), Query Frame = 3 Query: 66 MESNPNKALTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFI-------------------------STLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSS 674 M P + + + P+LSE VLEA++ GF TPVQA+ IPL ++KDV V+A TGSGKTL+F++P+VE L R K H + +IISPTREL+SQIYHV + STL V +LL G D+ K ++ NLL+ TPGRL +++ V + E+LVLDEADRLLD+GF++ + II RLPK RRTGLFS+ Sbjct: 1 MAPKPPAGTSSRAWDGVSPSLSEWVLEAVSSMGFTRMTPVQASAIPLFMAHKDVVVEAVTGSGKTLSFLIPIVEKLLRLEEPIKKHHVGAIIISPTRELASQIYHVLLSLLAFHPPSASVINPSEDDDVPRQKFPSSTLKVVPQLLLGGSTTPAEDLSKFLKQSPNLLVSTPGRLLELLSSPHVHCPQSSFEMLVLDEADRLLDLGFKETLQNIIRRLPKQRRTGLFSA 229
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: SPB4_ASPCL (ATP-dependent rRNA helicase spb4 OS=Aspergillus clavatus GN=spb4 PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.833e-39 Identity = 98/229 (42.79%), Postives = 132/229 (57.64%), Query Frame = 3 Query: 66 MESNPNKALTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFI-------------------------STLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSS 674 M NP K + + + P LSE VLEA++ GF TPVQA+ IPL ++KDV V+A TGSGKTL+F++P+VE L R K H I +IISPTREL+SQI+ V Q + STL V +LL G D+ + + N+L+ TPGRL +++ V + E+LVLDEADRLLD+GF++ + I+ RLPK RRTGLFS+ Sbjct: 1 MAPNPPKGTSSRAWDAVTPPLSEWVLEAMSSMGFARMTPVQASAIPLFMAHKDVVVEAVTGSGKTLSFLLPIVEKLLRLEEPIKKHHIGAIIISPTRELASQIHSVMQSLLAFHPPSAAAMTPLDDDDAPRQKFPSSTLKVVPQLLLGGSTTPAEDLSRFLKLSPNVLVSTPGRLLELLSSPHVHCPQSSFEMLVLDEADRLLDLGFKETLQNILRRLPKQRRTGLFSA 229
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: SPB4_NEOFI (ATP-dependent rRNA helicase spb4 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=spb4 PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.083e-39 Identity = 97/229 (42.36%), Postives = 130/229 (56.77%), Query Frame = 3 Query: 66 MESNPNKALTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFI-------------------------STLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSS 674 M P + + + PALSE VLEA++ GF TPVQA+ IPL ++KDV V+A TGSGKTL+F++P+VE L R K H I +IISPTREL+SQIY+V + STL V +LL G D+ + N+L+ TPGRL +++ V + E+LVLDEADRLLD+GF++ + I+ RLPK RRTGLFS+ Sbjct: 1 MAPKPPSGTSSRAWDAVTPALSEWVLEAMSSMGFTRMTPVQASAIPLFMAHKDVVVEAVTGSGKTLSFLIPVVEKLLRLEEPIKKHHIGAIIISPTRELASQIYNVLSSLLAFHPPSAAAINPSEDDDAPRPKFPSSTLKVVPQLLLGGSTTPAEDLSTFLKRSPNVLVSTPGRLLELLSSPHVHCPQSSFEMLVLDEADRLLDLGFKETLQNILRRLPKQRRTGLFSA 229
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DDX55_DROME (Probable ATP-dependent RNA helicase DDX55 homolog OS=Drosophila melanogaster GN=CG9630 PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 6.965e-39 Identity = 92/208 (44.23%), Postives = 131/208 (62.98%), Query Frame = 3 Query: 90 LTETRFSDL-KPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARK--PHQIMGMIISPTRELSSQIYHVAQPFI--STLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMD-----VLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSSYST 683 ++ ++S L KP LS+ VL+ + GF+ TPVQ A IPLL + KDV+ +A TGSGKTLAF+VP++EIL+R P +I ++ISPTREL+ QI V F+ L + L+VGG ++ D+ + E +L+ TPGRL D+ +R ++LE LVLDEADRLLD+GF+ ++ I+ LP+ RRTGLFS+ T Sbjct: 1 MSRKKWSSLDKPPLSDAVLQVVQSFGFQQMTPVQTAAIPLLLARKDVSAEAVTGSGKTLAFLVPMLEILQRRHKETPWGPKEIGALVISPTRELARQISEVLAQFLEHEDLEHLNQQLIVGGNSIEEDIATLRRETPCILVCTPGRLEDLFQRKGDDLNLAAQVKSLEFLVLDEADRLLDLGFKTSVNNILGYLPRQRRTGLFSATQT 208
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: SPB4_ASPFU (ATP-dependent rRNA helicase spb4 OS=Aspergillus fumigatus GN=spb4 PE=3 SV=2) HSP 1 Score: 159.844 bits (403), Expect = 1.188e-38 Identity = 96/229 (41.92%), Postives = 130/229 (56.77%), Query Frame = 3 Query: 66 MESNPNKALTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFI-------------------------STLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSS 674 M P + + + PALSE VLEA++ GF TPVQA+ IPL ++KDV V+A TGSGKTL+F++P+VE L R K H + +IISPTREL+SQIY+V + STL V +LL G D+ + N+L+ TPGRL +++ V + E+LVLDEADRLLD+GF++ + I+ RLPK RRTGLFS+ Sbjct: 1 MAPKPPSGTSLRAWDAVTPALSEWVLEAMSSMGFTRMTPVQASAIPLFMAHKDVVVEAVTGSGKTLSFLIPVVEKLLRLEEPIKKHHVGAIIISPTRELASQIYNVLSSLLAFHPPSAAAINPSEDDDAPRPKFPSSTLKVVPQLLLGGSTTPAEDLSTFLKRSPNVLVSTPGRLLELLSSPHVHCPQSSFEMLVLDEADRLLDLGFKETLQNILRRLPKQRRTGLFSA 229
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: SPB4_ASPNC (ATP-dependent rRNA helicase spb4 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=spb4 PE=3 SV=2) HSP 1 Score: 159.458 bits (402), Expect = 1.552e-38 Identity = 96/230 (41.74%), Postives = 129/230 (56.09%), Query Frame = 3 Query: 66 MESNPNKALTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFI--------------------------STLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSS 674 M P + + + PALSE VL+A+A GF TPVQA+ IPL ++KDV V+A TGSGKTL+F++P+VE L R K H + +IISPTREL+SQIY+V + STL V +LL G D+ + NLL+ TPGRL +++ V + E+LV+DEADRLLD+GF+ + I+ RLPK RRTGLFS+ Sbjct: 1 MAPKPPPGTSARAWDGVTPALSEWVLDAVASMGFTRMTPVQASAIPLFMAHKDVVVEAVTGSGKTLSFLIPVVEKLLRLEEPLKKHHVGAIIISPTRELASQIYNVLTSLLAFHPPSASTLKPSDDDDDAPRQKFPSSTLKVVPQLLLGGSTTPAEDLSTFLKRSPNLLVSTPGRLLELLSSPHVHCPQSSFEMLVMDEADRLLDLGFKDTLQNILRRLPKQRRTGLFSA 230
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: SPB4_SCLS1 (ATP-dependent rRNA helicase spb4 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=spb4 PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.647e-38 Identity = 93/210 (44.29%), Postives = 125/210 (59.52%), Query Frame = 3 Query: 114 LKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFI----------------------STLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSS 674 L P+L+E +L+A+ GFE TPVQA+TIPL KDV V+A TGSGKTL+F++P+VE L R K H + +I+SPTREL++QI+ V + STL V +LL G D+ + + NLLI TPGRL +++ V + E+LVLDEADRLLD+GF+ + I+SRLPK RRTGLFS+ Sbjct: 17 LTPSLAEWILDAIKSMGFEKMTPVQASTIPLFMGNKDVVVEAVTGSGKTLSFLIPVVEKLLRLEEPIKKHHVGAIIVSPTRELATQIHSVLTSLLAFHEPSAGALKPLEEGEKRKPSSTLRVVSQLLLGGTTTPAQDLSRFLKNSPNLLISTPGRLLELLSSPHVHCPQSSFEVLVLDEADRLLDLGFKDDLQKILSRLPKQRRTGLFSA 226
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: SPB4_BOTFB (ATP-dependent rRNA helicase spb4 OS=Botryotinia fuckeliana (strain B05.10) GN=spb4 PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 4.514e-38 Identity = 92/210 (43.81%), Postives = 125/210 (59.52%), Query Frame = 3 Query: 114 LKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFI----------------------STLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSS 674 L P+L+E VL+A++ GFE TPVQA+TIPL KDV V+A TGSGKTL+F++P+VE L R K H + +I+SPTREL++QI+ V + STL + +LL G D+ + + NLLI TPGRL +++ V + E+LVLDEADRLLD+GF+ + I+ RLPK RRTGLFS+ Sbjct: 17 LTPSLAEWVLDAISSMGFEKMTPVQASTIPLFMGNKDVVVEAVTGSGKTLSFLIPVVEKLLRLEEPLKKHHVGAIIVSPTRELATQIHSVLTSLLKFHEPSAEALQPLEEGEKRKPSSTLRVIPQLLLGGTTTPAQDLSRFLKNSPNLLISTPGRLLELLSSPHVHCPQSSFEVLVLDEADRLLDLGFKDDLQKILGRLPKQRRTGLFSA 226
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: SPB4_AJECN (ATP-dependent rRNA helicase SPB4 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=SPB4 PE=3 SV=2) HSP 1 Score: 157.147 bits (396), Expect = 7.700e-38 Identity = 93/219 (42.47%), Postives = 127/219 (57.99%), Query Frame = 3 Query: 114 LKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFI-------------------------------STLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSS 674 L P LSE +L+A++ GF TPVQA+TIPL ++KDV V+A TGSGKTLAF++P+VE L R S K H I ++ISPTREL++QIY+V + STL V +LL G D+ ++ N+L+ TPGRL +++ + E+LVLDEADRLLD+GF++ + I+ RLPK RRTGLFS+ Sbjct: 24 LTPPLSEWILDAISAMGFSRMTPVQASTIPLFMAHKDVVVEAVTGSGKTLAFLIPVVERLLRLESPIKKHHIGAILISPTRELATQIYNVLLSLLAFHGPSAARLQRTENNSGEVDESNPASSYPPSTLKIVPQLLLGGTTTPTQDLSAFLKQSPNVLVSTPGRLLELLSSPHAHCSQSSFEVLVLDEADRLLDLGFKEDLQKILQRLPKQRRTGLFSA 242
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: SPB4_ASPTN (ATP-dependent rRNA helicase spb4 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=spb4 PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.006e-37 Identity = 97/229 (42.36%), Postives = 129/229 (56.33%), Query Frame = 3 Query: 66 MESNPNKALTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFI-------------------------STLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSS 674 M P + + + P+LSE VL+A+A GF TPVQA+ IPL ++KDV V+A TGSGKTL+F+VP+VE L R K H I +IISPTREL+SQI+ V + STL V +LL G D+ + N+LI TPGRL +++ V + E+LVLDEADRLLD+GF++ + I+ RLPK RRTGLFS+ Sbjct: 1 MAPKPPAGTSSRAWEAVSPSLSEWVLDAVASWGFSKMTPVQASAIPLFMAHKDVVVEAVTGSGKTLSFLVPVVEKLLRLEEPIKKHHIGAIIISPTRELASQIHQVLLSLLAFHPPSAAAIKPPGEDDAPREKFSASTLKVVPQLLLGGSTTPAEDLSYFLKHSPNVLISTPGRLLELLSSPHVHCPQSSFEMLVLDEADRLLDLGFKETLQNILRRLPKQRRTGLFSA 229 The following BLAST results are available for this feature:
BLAST of FC868819 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868819 ID=FC868819; Name=FC868819; organism=Citrus clementina; type=EST; length=685bpback to top |