FC868819
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DBP4_NEOFI (ATP-dependent RNA helicase dbp4 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dbp4 PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.534e-29 Identity = 81/194 (41.75%), Postives = 119/194 (61.34%), Query Frame = 3 Query: 105 FSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMG-MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSSYST 683 FSDL LSEP LA + ++ T +Q+ I +DV A TGSGKTLAF+VP++E L R A H +G +I+SPTREL+ QI+ V + I + L++GG +K + +++ N+L+ TPGR+ +++ + D NL++LVLDEADR+LD+GFQ+ + II LPK R+T LFS+ T Sbjct: 49 FSDLP--LSEPTASGLASSHYKTLTDIQSRAISHALKGRDVLGAAKTGSGKTLAFLVPVLENLYRKQWAE--HDGLGALILSPTRELAIQIFEVLRK-IGRYHTFSAGLVIGGKSLKEEQERLGR--MNILVCTPGRMLQHLDQTALFDTYNLQMLVLDEADRILDLGFQQTVDAIIGHLPKERQTLLFSATQT 235
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DBP4_KLULA (ATP-dependent RNA helicase DBP4 OS=Kluyveromyces lactis GN=DBP4 PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.534e-29 Identity = 86/202 (42.57%), Postives = 117/202 (57.92%), Query Frame = 3 Query: 69 ESNPNKALTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSS 674 E NP K F DL +SE L+ L EA F T +Q +IPL DV A TGSGKTLAF++P++E L R + +IISPTREL+ QIY V I + L++GG +V + ++I N+LIGTPGR+ M++ + NL++LVLDEADR LDMGF++ + II+ LP R+T LFS+ Sbjct: 32 EYNP-KIAKANLFQDLP--ISEQTLKGLKEAAFIKLTEIQRESIPLSLKGHDVLGAAKTGSGKTLAFLIPVIEKLYREKWTDMDG-LGALIISPTRELAMQIYEVLSK-IGKHTTFSAGLVIGGKDVTFEKERISR--INILIGTPGRILQHMDQAVGFNTSNLQLLVLDEADRCLDMGFKRTLDAIINNLPASRQTLLFSA 226
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DBP4_ASPCL (ATP-dependent RNA helicase dbp4 OS=Aspergillus clavatus GN=dbp4 PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.534e-29 Identity = 80/194 (41.24%), Postives = 119/194 (61.34%), Query Frame = 3 Query: 105 FSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMG-MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSSYST 683 FSDL LSEP L L + F+ T +Q+ I +DV A TGSGKTLAF+VP++E L R A H +G +I+SPTREL+ QI+ V + I + L++GG ++ + +++ N+L+ TPGR+ +++ + D NL++LVLDEADR+LD+GFQ+ + I+ LPK R+T LFS+ T Sbjct: 51 FSDLP--LSEPTLSGLTSSHFKTLTDIQSRAISHALKGRDVLGAAKTGSGKTLAFLVPVLENLYRRQWAE--HDGLGALILSPTRELAIQIFEVLRK-IGRYHTFSAGLVIGGKSLREEQERLGR--MNILVCTPGRMLQHLDQTALFDTYNLQMLVLDEADRILDLGFQQTVDAIVGHLPKERQTLLFSATQT 237
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: RHLB_YERPY (ATP-dependent RNA helicase rhlB OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=rhlB PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 8.533e-29 Identity = 81/199 (40.70%), Postives = 120/199 (60.30%), Query Frame = 3 Query: 90 LTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEIL--RRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKL--RRTGLFSS 674 LTE +FSD AL V+EAL GF++CTP+QA +PL S +DVA A TG+GKTLAF+ L A R+ +Q +I++PTREL+ QI+ A+ +S + +K L GG + K+ E G ++LIGT GRL D + + ++ ++++VLDEADR+ D+GF K I ++ R+P + R LFS+ Sbjct: 6 LTEQKFSDF--ALHPLVVEALENKGFQYCTPIQALALPLTLSGRDVAGQAQTGTGKTLAFLASTFHYLLSHPAEEGRQTNQPRALIMAPTRELAVQIHSDAES-LSQVTGLKLGLAYGGDGYDKQL-KVLESGVDILIGTTGRLID-YAKQNYINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPSVDKRLNMLFSA 199
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: RHLB_YERPS (ATP-dependent RNA helicase rhlB OS=Yersinia pseudotuberculosis GN=rhlB PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 8.533e-29 Identity = 81/199 (40.70%), Postives = 120/199 (60.30%), Query Frame = 3 Query: 90 LTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEIL--RRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKL--RRTGLFSS 674 LTE +FSD AL V+EAL GF++CTP+QA +PL S +DVA A TG+GKTLAF+ L A R+ +Q +I++PTREL+ QI+ A+ +S + +K L GG + K+ E G ++LIGT GRL D + + ++ ++++VLDEADR+ D+GF K I ++ R+P + R LFS+ Sbjct: 6 LTEQKFSDF--ALHPLVVEALENKGFQYCTPIQALALPLTLSGRDVAGQAQTGTGKTLAFLASTFHYLLSHPAEEGRQTNQPRALIMAPTRELAVQIHSDAES-LSQVTGLKLGLAYGGDGYDKQL-KVLESGVDILIGTTGRLID-YAKQNYINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPSVDKRLNMLFSA 199
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: RHLB_YERPP (ATP-dependent RNA helicase rhlB OS=Yersinia pestis (strain Pestoides F) GN=rhlB PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 8.533e-29 Identity = 81/199 (40.70%), Postives = 120/199 (60.30%), Query Frame = 3 Query: 90 LTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEIL--RRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKL--RRTGLFSS 674 LTE +FSD AL V+EAL GF++CTP+QA +PL S +DVA A TG+GKTLAF+ L A R+ +Q +I++PTREL+ QI+ A+ +S + +K L GG + K+ E G ++LIGT GRL D + + ++ ++++VLDEADR+ D+GF K I ++ R+P + R LFS+ Sbjct: 6 LTEQKFSDF--ALHPLVVEALENKGFQYCTPIQALALPLTLSGRDVAGQAQTGTGKTLAFLASTFHYLLSHPAEEGRQTNQPRALIMAPTRELAVQIHSDAES-LSQVTGLKLGLAYGGDGYDKQL-KVLESGVDILIGTTGRLID-YAKQNYINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPSVDKRLNMLFSA 199
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: RHLB_YERPN (ATP-dependent RNA helicase rhlB OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=rhlB PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 8.533e-29 Identity = 81/199 (40.70%), Postives = 120/199 (60.30%), Query Frame = 3 Query: 90 LTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEIL--RRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKL--RRTGLFSS 674 LTE +FSD AL V+EAL GF++CTP+QA +PL S +DVA A TG+GKTLAF+ L A R+ +Q +I++PTREL+ QI+ A+ +S + +K L GG + K+ E G ++LIGT GRL D + + ++ ++++VLDEADR+ D+GF K I ++ R+P + R LFS+ Sbjct: 6 LTEQKFSDF--ALHPLVVEALENKGFQYCTPIQALALPLTLSGRDVAGQAQTGTGKTLAFLASTFHYLLSHPAEEGRQTNQPRALIMAPTRELAVQIHSDAES-LSQVTGLKLGLAYGGDGYDKQL-KVLESGVDILIGTTGRLID-YAKQNYINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPSVDKRLNMLFSA 199
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: RHLB_YERPE (ATP-dependent RNA helicase rhlB OS=Yersinia pestis GN=rhlB PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 8.533e-29 Identity = 81/199 (40.70%), Postives = 120/199 (60.30%), Query Frame = 3 Query: 90 LTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEIL--RRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKL--RRTGLFSS 674 LTE +FSD AL V+EAL GF++CTP+QA +PL S +DVA A TG+GKTLAF+ L A R+ +Q +I++PTREL+ QI+ A+ +S + +K L GG + K+ E G ++LIGT GRL D + + ++ ++++VLDEADR+ D+GF K I ++ R+P + R LFS+ Sbjct: 6 LTEQKFSDF--ALHPLVVEALENKGFQYCTPIQALALPLTLSGRDVAGQAQTGTGKTLAFLASTFHYLLSHPAEEGRQTNQPRALIMAPTRELAVQIHSDAES-LSQVTGLKLGLAYGGDGYDKQL-KVLESGVDILIGTTGRLID-YAKQNYINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPSVDKRLNMLFSA 199
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: RHLB_YERPB (ATP-dependent RNA helicase rhlB OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=rhlB PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 8.533e-29 Identity = 81/199 (40.70%), Postives = 120/199 (60.30%), Query Frame = 3 Query: 90 LTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEIL--RRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKL--RRTGLFSS 674 LTE +FSD AL V+EAL GF++CTP+QA +PL S +DVA A TG+GKTLAF+ L A R+ +Q +I++PTREL+ QI+ A+ +S + +K L GG + K+ E G ++LIGT GRL D + + ++ ++++VLDEADR+ D+GF K I ++ R+P + R LFS+ Sbjct: 6 LTEQKFSDF--ALHPLVVEALENKGFQYCTPIQALALPLTLSGRDVAGQAQTGTGKTLAFLASTFHYLLSHPAEEGRQTNQPRALIMAPTRELAVQIHSDAES-LSQVTGLKLGLAYGGDGYDKQL-KVLESGVDILIGTTGRLID-YAKQNYINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPSVDKRLNMLFSA 199
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: RHLB_YERPA (ATP-dependent RNA helicase rhlB OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=rhlB PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 8.533e-29 Identity = 81/199 (40.70%), Postives = 120/199 (60.30%), Query Frame = 3 Query: 90 LTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEIL--RRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKL--RRTGLFSS 674 LTE +FSD AL V+EAL GF++CTP+QA +PL S +DVA A TG+GKTLAF+ L A R+ +Q +I++PTREL+ QI+ A+ +S + +K L GG + K+ E G ++LIGT GRL D + + ++ ++++VLDEADR+ D+GF K I ++ R+P + R LFS+ Sbjct: 6 LTEQKFSDF--ALHPLVVEALENKGFQYCTPIQALALPLTLSGRDVAGQAQTGTGKTLAFLASTFHYLLSHPAEEGRQTNQPRALIMAPTRELAVQIHSDAES-LSQVTGLKLGLAYGGDGYDKQL-KVLESGVDILIGTTGRLID-YAKQNYINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPSVDKRLNMLFSA 199 The following BLAST results are available for this feature:
BLAST of FC868819 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868819 ID=FC868819; Name=FC868819; organism=Citrus clementina; type=EST; length=685bpback to top |