FC868819
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DDX10_CHICK (Probable ATP-dependent RNA helicase DDX10 OS=Gallus gallus GN=DDX10 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.114e-28 Identity = 82/194 (42.27%), Postives = 114/194 (58.76%), Query Frame = 3 Query: 102 RFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSSYST 683 RFSD LS+ L+ L EA + T +Q TI L KDV A TGSGKTLAF+VP +E+L R + +IISPTREL+ Q + V + + D + L++GG ++K + ++I N+LI TPGRL M+ +L++L+LDEADR+LDMGF ++ II LPK R+T LFS+ T Sbjct: 74 RFSDFP--LSKKTLKGLQEAQYRMVTEIQRQTIGLALQGKDVLGAAKTGSGKTLAFIVPALELLYRLQWT-SADGLGVLIISPTRELAFQTFKVLRK-VGKNHDFSAGLIIGGKDLKEESERIHH--INMLICTPGRLLQHMDETSYFYASDLQMLILDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQT 261
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DBP4_PICST (ATP-dependent RNA helicase DBP4 OS=Pichia stipitis GN=DBP4 PE=3 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 1.114e-28 Identity = 76/192 (39.58%), Postives = 116/192 (60.42%), Query Frame = 3 Query: 99 TRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSS 674 ++FSDL +++ L L E+ F T +Q TIP+ +D+ A TGSGKTLAF++P+VE L R + + + +I+SPTREL+ Q + V I + L+ GG +V+ + +++ N+L+GTPGR+ + ++ NL++LVLDEADR LDMGF+KQI I+ LP R+T LFS+ Sbjct: 47 SQFSDLP--ITQETLRGLNESSFMSLTDIQKKTIPIALKGEDLMGTARTGSGKTLAFLIPVVESLIR-NKITEHDGLAALIVSPTRELAVQTFEVLTK-IGKYNTFSAGLVTGGKDVQYEKERVSR--MNILVGTPGRISQHLNEAVGMETSNLQVLVLDEADRCLDMGFKKQIDNIVGHLPPTRQTLLFSA 232
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: RHLB_ERWCT (ATP-dependent RNA helicase rhlB OS=Erwinia carotovora subsp. atroseptica GN=rhlB PE=3 SV=3) HSP 1 Score: 126.331 bits (316), Expect = 1.456e-28 Identity = 77/187 (41.18%), Postives = 115/187 (61.50%), Query Frame = 3 Query: 90 LTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEIL--RRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP 644 LTE +FSD AL V+EAL GF +CTP+QA +PL S +DVA A TG+GKTLAF+ L A++ R+ +Q +I++PTREL+ QI+ A+ +S L +K L GG + K+ E G ++L+GT GRL D + + ++ ++++VLDEADR+ D+GF K I ++ R+P Sbjct: 6 LTEQKFSDF--ALHPQVIEALESKGFHYCTPIQALALPLTLSGRDVAGQAQTGTGKTLAFLASTFHYLLSHPANAERQTNQPRALIMAPTRELAVQIHSDAEA-LSHLTGLKLGLAYGGDGYDKQL-KVLENGVDILVGTTGRLID-YAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: HAS1_USTMA (ATP-dependent RNA helicase HAS1 OS=Ustilago maydis GN=HAS1 PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.456e-28 Identity = 78/188 (41.49%), Postives = 117/188 (62.23%), Query Frame = 3 Query: 126 LSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMG-MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPK-LRRTGLFSSYST 683 LSEP +A+ GF+ T VQA IP L + KDV A TGSGKTL+F++P +E+L R KP G +IISPTREL+ QI+ VA+ ++ +++ GG +A+ K+ ++G NL++ TPGRL D ++ F NL+ L +DEADR+L++GF+ ++ I+ LP R++ LFS+ T Sbjct: 57 LSEPTRKAIDAMGFKTMTEVQARCIPPLMAGKDVLGAAQTGSGKTLSFLIPAIEMLHRLKF--KPRNGTGAIIISPTRELALQIFGVAKELMAHHHQTFGIIM-GGANRRAEADKL-QKGVNLIVATPGRLLDHLQNTKGFVFSNLKALCIDEADRILEIGFEDEMRQIVKILPNDNRQSMLFSATQT 240
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DBP4_EMENI (ATP-dependent RNA helicase dbp4 OS=Emericella nidulans GN=dbp4 PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.456e-28 Identity = 85/208 (40.87%), Postives = 124/208 (59.62%), Query Frame = 3 Query: 63 RMESNPNKALTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMG-MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSSYST 683 R+E KA E+ FSDL +SEP L L + F+ T +Q+ I +DV A TGSGKTLAF+VP++E L R + H +G +IISPTREL+ QI+ V + I + L++GG +K + +++ N+L+ TPGR+ +++ + NL++LVLDEADR++DMGFQK + II LP R+T LFS+ T Sbjct: 37 RVEDLDLKAKYES-FSDLP--ISEPTLSGLTSSHFKTLTDIQSRAISHALKGRDVLGAAKTGSGKTLAFLVPILENLYRKQWS--DHDGLGALIISPTRELAIQIFEVLRK-IGRYHTFSAGLVIGGKSLKEEQERLGR--MNILVCTPGRMLQHLDQTAFFETYNLQMLVLDEADRIMDMGFQKTVDAIIGHLPPERQTLLFSATQT 236
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: RHLB_HAES2 (ATP-dependent RNA helicase rhlB OS=Haemophilus somnus (strain 2336) GN=rhlB PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.901e-28 Identity = 76/200 (38.00%), Postives = 121/200 (60.50%), Query Frame = 3 Query: 81 NKALTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISR--LPKLRRTGLFSS 674 N L++ RFSDL AL V +A+ E GFEFCTP+QA ++P+ +D+A A TG+GKT+AF+ L + ++ Q +I++PTREL QI + A F+ +K+ L GG +K I + G ++LIGT GR+ D + + ++ ++++VLDEADR+ D+GF + I Y++ + +P+ R T LFS+ Sbjct: 3 NSHLSQQRFSDL--ALHRIVQQAIKEKGFEFCTPIQALSLPITLKGQDIAGQAQTGTGKTIAFLTATFHHLLQKNNINSSEQPRALILAPTRELVVQIANDAN-FLVQATGLKTGLAYGGEGYDKQLKVI-DRGIDILIGTTGRVIDYV-KQGIIRLDYIQVVVLDEADRMFDLGFIRDIRYLLRKCPVPQQRLTMLFSA 197
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: RHLB_ENT38 (ATP-dependent RNA helicase rhlB OS=Enterobacter sp. (strain 638) GN=rhlB PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.901e-28 Identity = 77/187 (41.18%), Postives = 113/187 (60.43%), Query Frame = 3 Query: 90 LTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEIL--RRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP 644 LTE +FSD AL V+EAL GF +CTP+QA +PL + +DVA A TG+GKT+AF+ L A + RK +Q +I++PTREL+ QI+ A+P T +K L GG + K+ E G ++LIGT GRL D + + ++ ++++VLDEADR+ D+GF K I ++ R+P Sbjct: 6 LTEQKFSDF--ALHAKVIEALENKGFHYCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSAFHYLLSNPAMADRKVNQPRALIMAPTRELAVQIHADAEPLAQT-TGLKLGLAYGGDGYDKQL-KVLESGVDILIGTTGRLID-YAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: HAS1_ASHGO (ATP-dependent RNA helicase HAS1 OS=Ashbya gossypii GN=HAS1 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.901e-28 Identity = 82/196 (41.84%), Postives = 122/196 (62.24%), Query Frame = 3 Query: 102 RFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMI-ISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP-KLRRTGLFSSYST 683 +F +L LS L+A+ + GF T VQA TIP L + +DV A TGSGKTLAF++P +E+L S KP G+I I+PTREL+ QI+ VA+ + ++ +GG + + +K+ + G NLLI TPGRL D ++ F+NL+ LV+DEADR+L++GF+ ++ II LP + R++ LFS+ T Sbjct: 40 KFDELN--LSSQTLKAIGKMGFTKMTQVQARTIPPLMAGRDVLGAAKTGSGKTLAFLLPAIEMLH--SLKFKPRNGTGVIVITPTRELALQIFGVARELMEFHSQTFGIV-IGGANRRQEAEKLAK-GVNLLIATPGRLLDHLQNTKGFVFKNLKALVIDEADRILEIGFEDEMKQIIKILPNEDRQSMLFSATQT 229
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DRS1_YARLI (ATP-dependent RNA helicase DRS1 OS=Yarrowia lipolytica GN=DRS1 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.901e-28 Identity = 71/202 (35.15%), Postives = 121/202 (59.90%), Query Frame = 3 Query: 69 ESNPNKALTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSS 674 E+N F L LS PV++ ++ G++ TP+Q+ TIP+ KD+ A TGSGKT A+++P++E L SS +++ +++PTRELS Q+ V + + V+ L VGG+ ++ ++++ ++I TPGR D + + ++EILV+DEADR+L+ GFQ++++ I++ LPK R+T LFS+ Sbjct: 242 ENNDKTESVHKTFQTLN--LSRPVMKGISALGYQAPTPIQSRTIPIALMGKDLVAGAVTGSGKTAAYIIPVLERLLYKSSKVAATKVV--VLTPTRELSIQVADVGKKLAQYVSGVRFGLAVGGLNLRVQEQELKTR-PEVVIATPGRFIDHVRNSPSFNVDDVEILVIDEADRMLEEGFQQELTEILTLLPKKRQTLLFSA 438
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DRS1_MAGGR (ATP-dependent RNA helicase DRS1 OS=Magnaporthe grisea GN=DRS1 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.901e-28 Identity = 77/187 (41.18%), Postives = 111/187 (59.36%), Query Frame = 3 Query: 123 ALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSSYST 683 +LS P+L L GF TP+Q+ TIP+ KDV A TGSGKT AFVVP++E R +K +I++PTREL+ Q + VA +++ D+K L VGG+ +K ++ +++I TPGR D M +EILVLDEADR+L+ GF +++ I++ LPK R+T LFS+ T Sbjct: 261 SLSRPILRGLTSVGFAKPTPIQSKTIPIALMGKDVVGGAVTGSGKTAAFVVPILE--RLLYRPKKVPTSRVVILAPTRELAIQCHAVATK-LASHTDIKFCLAVGGLSLKVQESELRLR-PDVIIATPGRFIDHMRNSASFAVDTVEILVLDEADRMLEDGFADELNEILTTLPKSRQTMLFSATMT 443 The following BLAST results are available for this feature:
BLAST of FC868819 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868819 ID=FC868819; Name=FC868819; organism=Citrus clementina; type=EST; length=685bpback to top |