FC868819
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DRS1_ASPFU (ATP-dependent RNA helicase drs1 OS=Aspergillus fumigatus GN=drs1 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.901e-28 Identity = 78/186 (41.94%), Postives = 109/186 (58.60%), Query Frame = 3 Query: 126 LSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSSYST 683 LS P+L LA F TP+Q TIP+ KD+ A TGSGKT AFVVP++E R RK I+ PTREL+ Q Y+VA ++T D+ LVGG ++ + + I ++ +++I TPGR D M LEILVLDEADR+L+ GF +++ I++ +PK R+T LFS+ T Sbjct: 317 LSRPILRGLASVNFTTPTPIQQKTIPVALLGKDIVGSAVTGSGKTAAFVVPILE--RLLFRPRKVPTSRVAILMPTRELAVQCYNVATK-LATHTDITFCQLVGGFSLR-EQENILKKRPDVIIATPGRFIDHMRNSPSFTVDTLEILVLDEADRMLEDGFADELNEILTTIPKSRQTMLFSATMT 498
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DRS1_ASPTN (ATP-dependent RNA helicase drs1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=drs1 PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.483e-28 Identity = 78/186 (41.94%), Postives = 109/186 (58.60%), Query Frame = 3 Query: 126 LSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSSYST 683 LS P+L LA F TP+Q TIP+ KD+ A TGSGKT AFVVP++E R RK I+ PTREL+ Q Y+VA ++T D+ LVGG ++ + + I ++ +++I TPGR D M LEILVLDEADR+L+ GF +++ I++ +PK R+T LFS+ T Sbjct: 311 LSRPILRGLAAVNFTNPTPIQRKTIPVALLGKDIVGSAVTGSGKTAAFVVPILE--RLLFRPRKVPTSRVAILMPTRELAVQCYNVATK-LATYTDITFCQLVGGFSLR-EQENILKKRPDVIIATPGRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEILTTIPKSRQTMLFSATMT 492
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DRS1_ASPOR (ATP-dependent RNA helicase drs1 OS=Aspergillus oryzae GN=drs1 PE=3 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 2.483e-28 Identity = 78/186 (41.94%), Postives = 109/186 (58.60%), Query Frame = 3 Query: 126 LSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSSYST 683 LS P+L LA F TP+Q TIP+ KD+ A TGSGKT AFVVP++E R RK I+ PTREL+ Q Y+VA ++T D+ LVGG ++ + + I ++ +++I TPGR D M LEILVLDEADR+L+ GF +++ I++ +PK R+T LFS+ T Sbjct: 309 LSRPILRGLAAVNFTNPTPIQRKTIPVALLGKDIVGSAVTGSGKTAAFVVPILE--RLLFRPRKVPTSRVAILMPTRELAVQCYNVATK-LATYTDITFCQLVGGFSLR-EQENILKKRPDVIIATPGRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEILTTIPKSRQTMLFSATMT 490
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DDX10_DICDI (Probable ATP-dependent RNA helicase ddx10 OS=Dictyostelium discoideum GN=ddx10 PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.483e-28 Identity = 80/195 (41.03%), Postives = 117/195 (60.00%), Query Frame = 3 Query: 99 TRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSSYST 683 T F DL +S+ L+AL E+ F T +Q A++P +D+ A TGSGKTL+F++P++E L R R I +++SPTREL+ QI+ V + + + L++GG V+ + KI N+LI TPGRL M+ D NL+ILVLDEADR+LD+GF K ++ I+ LP+ R+T LFS+ T Sbjct: 141 TDFKDLP--ISQLTLKALTESKFLKLTDIQRASLPHTLCGRDILGAAKTGSGKTLSFILPILETLWRNRWGRDDG-IGAIVLSPTRELAIQIFDVLKA-VGKYHTFSAGLIIGGRNVQQEKDKIN--AMNILIATPGRLLQHMDETYGFDCSNLKILVLDEADRILDLGFSKCLNSIVENLPRERQTLLFSATQT 329
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DBP4_ASPNC (ATP-dependent RNA helicase dbp4 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=dbp4 PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.483e-28 Identity = 76/198 (38.38%), Postives = 120/198 (60.61%), Query Frame = 3 Query: 93 TETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMG-MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSSYST 683 T +F+DL LSEP LA + ++ T +Q+ I +D+ A TGSGKTLAF++P++E L R + H +G +++SPTREL+ QI+ V + + + L++GG ++ + +++ N+L+ TPGR+ +++ + NL++LVLDEADR+LDMGFQK + II LPK R+T LFS+ T Sbjct: 45 TIEQFTDLP--LSEPTASGLASSHYKTLTDIQSRAISHALKGRDILGAAKTGSGKTLAFLIPILENLYRKQWSE--HDGLGALVLSPTRELAIQIFEVLRK-VGRYHTFSAGLVIGGKSLREEQERLGR--MNILVCTPGRMLQHLDQTSFFETHNLQMLVLDEADRILDMGFQKTVDAIIGHLPKERQTLLFSATQT 235
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: RRP3_ASPOR (ATP-dependent rRNA helicase rrp3 OS=Aspergillus oryzae GN=rrp3 PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.243e-28 Identity = 78/208 (37.50%), Postives = 119/208 (57.21%), Query Frame = 3 Query: 51 P*TVRMESNPNKALTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSS 674 P T E P++A + S + L E + EA G++ T +QA IPL +D+ A TGSGKT AF +P+++ L KP G++++PTREL+ QI + ST+ V+S +LVGG+++ + + ++ ++++ TPGRL D +E RNL+ LV+DEADRLLDM F + I+ LP+ RRT LFS+ Sbjct: 34 PNTTEQEQEPSEAPKQAPKSFKELGLIEQLCEACDSMGYKAPTAIQAEAIPLALQGRDLIGLAETGSGKTAAFALPILQALMD-----KPSSFFGLVLAPTRELAYQISQAFEGLGSTI-SVRSTVLVGGMDMVSQSIALGKK-PHIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDMDFGPILDKILKVLPRERRTYLFSA 234
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: RHLB_VIBCM (ATP-dependent RNA helicase rhlB OS=Vibrio cholerae serotype O1 (strain M66-2) GN=rhlB PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.243e-28 Identity = 74/199 (37.19%), Postives = 121/199 (60.80%), Query Frame = 3 Query: 90 LTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVE--ILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRL--PKLRRTGLFSS 674 +TE +F+D L V++ L + GF +CTP+QA +P+L S +D+A A TG+GKTLAF+ + A+ R Q +I++PTREL+ QI++ A+P +++ +K+ L GG + K+ + G ++LIGT GR+ D ++ V + +++ +VLDEADR+ D+GF K I ++ R+ PK R LFS+ Sbjct: 6 ITEHKFADF--GLQPQVIDGLEKKGFVYCTPIQALALPVLLSGQDIAGQAQTGTGKTLAFLTATFNHLLTTPAAEGRAETQPRAIIMAPTRELAIQIFNDAEPLLAS-TGLKAALAYGGESYDKQLAKL-QSGVDILIGTTGRIIDFYKQR-VFNLNHIQAVVLDEADRMFDLGFIKDIRFLFRRMPEPKDRLNMLFSA 199
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: RHLB_VIBCH (ATP-dependent RNA helicase rhlB OS=Vibrio cholerae GN=rhlB PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.243e-28 Identity = 74/199 (37.19%), Postives = 121/199 (60.80%), Query Frame = 3 Query: 90 LTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVE--ILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRL--PKLRRTGLFSS 674 +TE +F+D L V++ L + GF +CTP+QA +P+L S +D+A A TG+GKTLAF+ + A+ R Q +I++PTREL+ QI++ A+P +++ +K+ L GG + K+ + G ++LIGT GR+ D ++ V + +++ +VLDEADR+ D+GF K I ++ R+ PK R LFS+ Sbjct: 6 ITEHKFADF--GLQPQVIDGLEKKGFVYCTPIQALALPVLLSGQDIAGQAQTGTGKTLAFLTATFNHLLTTPAAEGRAETQPRAIIMAPTRELAIQIFNDAEPLLAS-TGLKAALAYGGESYDKQLAKL-QSGVDILIGTTGRIIDFYKQR-VFNLNHIQAVVLDEADRMFDLGFIKDIRFLFRRMPEPKDRLNMLFSA 199
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: RHLB_VIBC3 (ATP-dependent RNA helicase rhlB OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=rhlB PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.243e-28 Identity = 74/199 (37.19%), Postives = 121/199 (60.80%), Query Frame = 3 Query: 90 LTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVE--ILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRL--PKLRRTGLFSS 674 +TE +F+D L V++ L + GF +CTP+QA +P+L S +D+A A TG+GKTLAF+ + A+ R Q +I++PTREL+ QI++ A+P +++ +K+ L GG + K+ + G ++LIGT GR+ D ++ V + +++ +VLDEADR+ D+GF K I ++ R+ PK R LFS+ Sbjct: 6 ITEHKFADF--GLQPQVIDGLEKKGFVYCTPIQALALPVLLSGQDIAGQAQTGTGKTLAFLTATFNHLLTTPAAEGRAETQPRAIIMAPTRELAIQIFNDAEPLLAS-TGLKAALAYGGESYDKQLAKL-QSGVDILIGTTGRIIDFYKQR-VFNLNHIQAVVLDEADRMFDLGFIKDIRFLFRRMPEPKDRLNMLFSA 199
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: RHLB_PSEA6 (ATP-dependent RNA helicase rhlB OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=rhlB PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.243e-28 Identity = 73/186 (39.25%), Postives = 115/186 (61.83%), Query Frame = 3 Query: 90 LTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPK 647 LTET F+DL ++E V++AL+ A F CTP+QA ++P L D+A A TG+GKT+AF+V L K Q +I++PTREL+ QI++ A+ +S + L+ GG ++ +K+ EEG +++IGT GR+ D + ++ +++ VLDEADR+ D+GF K I Y+ +R+PK Sbjct: 6 LTETHFADLP--INEQVVKALSAANFSHCTPIQALSLPPLLEGNDIAGQAQTGTGKTIAFLVATFHYLLSNPQPTK-KQPRAIIMAPTRELAVQIFNDAE-LLSQHTGLSLGLIYGGEGYQSQREKL-EEGVDIIIGTTGRIIDYY-KQNIFSLAGIQVAVLDEADRMFDLGFIKDIRYLFNRMPK 185 The following BLAST results are available for this feature:
BLAST of FC868819 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868819 ID=FC868819; Name=FC868819; organism=Citrus clementina; type=EST; length=685bpback to top |