FC868819
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DRS1_NEOFI (ATP-dependent RNA helicase drs1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=drs1 PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.243e-28 Identity = 83/206 (40.29%), Postives = 115/206 (55.83%), Query Frame = 3 Query: 69 ESNPNKALTETR-FSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSSYST 683 E A T R F D LS P+L LA F TP+Q TIP+ KD+ A TGSGKT AFVVP++E R RK I+ PTREL+ Q Y+VA ++T D+ LVGG ++ + + I ++ +++I TPGR D M LEILVLDEADR+L+ GF +++ I++ +P+ R+T LFS+ T Sbjct: 288 EEKSTAASTSNRSFQDFN--LSRPILRGLASVNFTTPTPIQQKTIPVALLGKDIVGSAVTGSGKTAAFVVPILE--RLLFRPRKVPTSRVAILMPTRELAVQCYNVATK-LATHTDITFCQLVGGFSLR-EQENILKKRPDVIIATPGRFIDHMRNSPSFTVDTLEILVLDEADRMLEDGFADELNEILTTIPQSRQTMLFSATMT 487
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DRS1_COCIM (ATP-dependent RNA helicase DRS1 OS=Coccidioides immitis GN=DRS1 PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.243e-28 Identity = 80/206 (38.83%), Postives = 117/206 (56.80%), Query Frame = 3 Query: 69 ESNPNKALTETRFSDLKPA-LSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSSYST 683 E NP K+ + S + LS P+L LA GF TP+Q IP+ KD+ A TGSGKT AF++P++E R RK I+ PTREL+ Q Y+VA ++T D+ LVGG ++ + + + ++ +++I TPGR D M LEILVLDEADR+L+ GF +++ I++ +PK R+T LFS+ T Sbjct: 306 EENPTKSEETSSNSTFQNFNLSRPILRGLAAVGFSAPTPIQRKAIPVGLLGKDLVGGAVTGSGKTAAFIIPILE--RLLYRPRKVPTSRVAILMPTRELAVQCYNVATK-LATYTDITFCQLVGGFSLR-EQENVLKQRPDVIIATPGRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEILNTIPKSRQTMLFSATMT 507
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DRS1_BOTFB (ATP-dependent RNA helicase drs1 OS=Botryotinia fuckeliana (strain B05.10) GN=drs1 PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.243e-28 Identity = 77/184 (41.85%), Postives = 109/184 (59.24%), Query Frame = 3 Query: 123 ALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSS 674 +LS P+L LA GF TP+Q+ TIP+ KDV A TGSGKT AFVVP++E R +K I+ PTREL+ Q + VA +++ D+K L VGG+ +K ++ +++I TPGR D M LEILVLDEADR+L+ GF +++ I++ +PK R+T LFS+ Sbjct: 274 SLSRPILRGLATVGFTQPTPIQSKTIPVALLGKDVVGGAVTGSGKTAAFVVPVLE--RLLYRPKKVPTSRVAILMPTRELAIQCHAVATK-LASHTDIKFCLAVGGLSLKVQEAELRLR-PDVIIATPGRFIDHMRNSPSFTVDTLEILVLDEADRMLEAGFADELNEILTTIPKSRQTMLFSA 453
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: RHLB_SODGM (ATP-dependent RNA helicase rhlB OS=Sodalis glossinidius (strain morsitans) GN=rhlB PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.235e-28 Identity = 74/187 (39.57%), Postives = 113/187 (60.43%), Query Frame = 3 Query: 90 LTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVE--ILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP 644 LTE +FSD AL P++E L GF CTP+QA T+P + KDVA A TG+GKTLAF+ + A+ R+ +Q +I++PTREL+ QI+ A+P ++ +K L GG + K+ E G ++L+GT GRL D + + ++ ++++VLDEADR+ D+GF K I ++ R+P Sbjct: 6 LTEKKFSDF--ALYPPIVEVLDSKGFNNCTPIQALTLPTTLAGKDVAGQAQTGTGKTLAFLTATFHHLLTHPAAEGRQTNQPRALIMAPTRELAVQIHSDAEP-LAQATGLKMGLAYGGDGYDKQL-KVLEAGVDILVGTTGRLID-YTKQNYVNMSAIQVVVLDEADRMFDLGFIKDIRWLFRRMP 187
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: RH51_ARATH (DEAD-box ATP-dependent RNA helicase 51 OS=Arabidopsis thaliana GN=RH51 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.235e-28 Identity = 78/199 (39.20%), Postives = 120/199 (60.30%), Query Frame = 3 Query: 90 LTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMI-ISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSSYST 683 +T F L LSE A+ E GF++ T +QA +I L KDV A TGSGKTLAF++P VE+L + + P G+I I PTREL+ Q +VA+ + S +++GG +++ ++I G+NL+I TPGRL D ++ +++L+ LV+DEADR+L+ F++ ++ I+ LPK R+T LFS+ T Sbjct: 86 MTNVTFDSLD--LSEQTSIAIKEMGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTLAFLIPAVELLFKERFS--PRNGTGVIVICPTRELAIQTKNVAEELLKHHSQTVS-MVIGGNNRRSEAQRIAS-GSNLVIATPGRLLDHLQNTKAFIYKHLKCLVIDEADRILEENFEEDMNKILKILPKTRQTALFSATQT 278
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: RH40_ARATH (DEAD-box ATP-dependent RNA helicase 40 OS=Arabidopsis thaliana GN=RH40 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.235e-28 Identity = 71/183 (38.80%), Postives = 112/183 (61.20%), Query Frame = 3 Query: 126 LSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSS 674 L +L L AGF TP+QA T P+ +D+ A TGSGKTL +++P +LR + + + +I++PTREL++QI A F + L GG +K++E GA++++ TPGRL DI+E M ++DF+ + +LVLDEADR+LDMGF+ QI I++ +P R+T ++++ Sbjct: 442 LPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAFILLRHCRNDSRNGPTV-LILAPTRELATQIQDEALRF-GRSSRISCTCLYGGAPKGPQLKELER-GADIVVATPGRLNDILE-MKMIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTA 620
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: HAS1_GIBZE (ATP-dependent RNA helicase HAS1 OS=Gibberella zeae GN=HAS1 PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.235e-28 Identity = 86/217 (39.63%), Postives = 130/217 (59.91%), Query Frame = 3 Query: 39 NPRLP*TVRMESNPNKALTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMI-ISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKL-RRTGLFSSYST 683 N LP ++ P F +LK LSE ++A+ E F T +Q IP + +DV A TGSGKTLAF++P++E+L +S KP G+I +SPTREL+ QI+ VA+ ++ + ++GG +A+ +K+ +G NLLI TPGRL D ++ + F+NL+ LV+DEADR+L++GF+ ++ II LPK R+T LFS+ T Sbjct: 95 NTDLPNGGQLTLPPVAGAEAQSFEELK--LSEKTMKAINEMKFTKMTEIQRRGIPPSLAGRDVLGAAKTGSGKTLAFLIPVIEML--SSLRFKPRNGTGVIVVSPTRELALQIFGVARELMAHHSQTYGI-VIGGANRRAEAEKL-AKGVNLLIATPGRLLDHLQNTPFV-FKNLKSLVIDEADRILEIGFEDEMRQIIKVLPKEDRQTMLFSATQT 304
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DRS1_SCLS1 (ATP-dependent RNA helicase drs1 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=drs1 PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.235e-28 Identity = 76/184 (41.30%), Postives = 109/184 (59.24%), Query Frame = 3 Query: 123 ALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSS 674 +LS P+L LA GF TP+Q+ TIP+ KDV A TGSGKT AF+VP++E R +K I+ PTREL+ Q + VA +++ D+K L VGG+ +K ++ +++I TPGR D M LEILVLDEADR+L+ GF +++ I++ +PK R+T LFS+ Sbjct: 274 SLSRPILRGLATVGFTQPTPIQSKTIPVALLGKDVVGGAVTGSGKTAAFIVPVLE--RLLYRPKKVPTSRVAILMPTRELAIQCHAVATK-LASHTDIKFCLAVGGLSLKVQEAELRLR-PDVIIATPGRFIDHMRNSPSFTVDTLEILVLDEADRMLEAGFADELNEILTTIPKSRQTMLFSA 453
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DRS1_CANAL (ATP-dependent RNA helicase DRS1 OS=Candida albicans GN=DRS1 PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.235e-28 Identity = 75/204 (36.76%), Postives = 129/204 (63.24%), Query Frame = 3 Query: 69 ESNPNKALTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVE-ILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPK-LRRTGLFSS 674 ES+P + T T F L+ LS PVL+ +AE F TP+Q+A+IP+ KD+ A TGSGKT A+++P++E +L + S++ K +I++PTREL+ Q+Y + + ++ L VGG+ ++ ++++ +++I TPGRL D + +++++LV+DEADR+L+ GFQ +++ I+S +PK R+T LFS+ Sbjct: 122 ESSPQQ--THTSFQTLQ--LSRPVLKGIAELKFTKPTPIQSASIPIALLGKDIVAGAQTGSGKTGAYMIPIIERLLYKPSTSTKV-----IILTPTRELALQVYEFGKKLSHHVNNLNIGLAVGGLNLRQQEEQLKTR-PDIVIATPGRLIDHIRNSPSFSVQDIQVLVIDEADRMLEEGFQDELTEILSLIPKHKRQTLLFSA 315
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DDX18_HUMAN (ATP-dependent RNA helicase DDX18 OS=Homo sapiens GN=DDX18 PE=1 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 4.235e-28 Identity = 76/200 (38.00%), Postives = 119/200 (59.50%), Query Frame = 3 Query: 87 ALTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMG-MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSSYST 683 A +T F+ L ++E L+A+ E GF T +Q +I L +D+ A TGSGKTLAF++P VE++ + P G +I+SPTREL+ Q + V + ++ L++GG A+ +K+ G N+++ TPGRL D M+ ++NL+ LV+DEADR+LD+GF++++ II LP R+T LFS+ T Sbjct: 173 AFEDTSFASLCNLVNENTLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLRFM--PRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYG-LIMGGSNRSAEAQKLGN-GINIIVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQTMLFSATQT 368 The following BLAST results are available for this feature:
BLAST of FC868819 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868819 ID=FC868819; Name=FC868819; organism=Citrus clementina; type=EST; length=685bpback to top |