FC868819
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: RHLB_PHOLL (ATP-dependent RNA helicase rhlB OS=Photorhabdus luminescens subsp. laumondii GN=rhlB PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.232e-27 Identity = 81/199 (40.70%), Postives = 117/199 (58.79%), Query Frame = 3 Query: 90 LTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEIL--RRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKL--RRTGLFSS 674 LTE +FSD AL V+EAL GF CTP+QA T+P +DVA A TG+GKTLAF+ L A+ R+ +Q +I++PTREL+ QIY A+ ++ +K L GG + KI E G ++LIGT GRL D ++ + + ++++VLDEADR+ D+GF K I ++ R+P + R LFS+ Sbjct: 6 LTEKKFSDF--ALHPKVIEALDNKGFSNCTPIQALTLPFTVEGRDVAGQAQTGTGKTLAFLASAFHYLLTHPAAEERQTNQPRALIMAPTRELAVQIYSDAED-LAQATGLKMGLAYGGDGYDKQL-KILESGVDILIGTTGRLIDYTKQGHI-NLNAVQVVVLDEADRMYDLGFIKDIRWLFRRMPPVNERMNLLFSA 199
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DRS1_VANPO (ATP-dependent RNA helicase DRS1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=DRS1 PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.232e-27 Identity = 71/202 (35.15%), Postives = 122/202 (60.40%), Query Frame = 3 Query: 69 ESNPNKALTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSS 674 ES+ + + F+ L LS PVL+ L++ G+ +P+Q+ATIP+ S KD+ A TGSGKT AF++P++E R K ++++PTREL+ QI V + + + L VGG+ ++ ++++ +++I TPGR D + + ++E+LV+DEADR+L+ GFQ++++ I++ LP R+T LFS+ Sbjct: 221 ESSEATSTVHSTFNSL--TLSRPVLKGLSDLGYTKPSPIQSATIPIGLSGKDIIAGAVTGSGKTAAFMIPIIE--RLLYKPAKVASTRVIVLTPTRELAIQIADVGKKIGKYVSGLTFGLAVGGLNLRQQEQELKTR-PDIVIATPGRFIDHVRNSSSFNVDSVEVLVMDEADRMLEEGFQEELNEILTLLPSKRQTLLFSA 417
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DRS1_PHANO (ATP-dependent RNA helicase DRS1 OS=Phaeosphaeria nodorum GN=DRS1 PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.232e-27 Identity = 74/187 (39.57%), Postives = 108/187 (57.75%), Query Frame = 3 Query: 123 ALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSSYST 683 +LS P+ + LA GF TP+QA IP+ KDV A TGSGKT AF++P++E R +K I PTREL+ Q ++VA +++ D+ LL GG + ++ +++I TPGR D M +LEILVLDEADR+L+ GF+ Q++ I++ +PK R+T LFS+ T Sbjct: 291 SLSRPIQKGLAAIGFTEPTPIQAKAIPIAMQGKDVVGGAETGSGKTAAFLIPILE--RLLYRPKKVPTTRVAIFMPTRELAVQCFNVATK-LASFTDITFALLAGGFSSREQEVMLKTR-PDVVIATPGRFIDHMHNTAAFQVEHLEILVLDEADRMLEEGFETQLNEILTTIPKSRQTMLFSATMT 473
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: RHLB_TOLAT (ATP-dependent RNA helicase rhlB OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=rhlB PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.609e-27 Identity = 76/187 (40.64%), Postives = 113/187 (60.43%), Query Frame = 3 Query: 90 LTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEIL--RRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP 644 LTE F++L L VL + GF CTP+QA TIPLL + K++A A TG+GKT+AF+ L AS+ R+ +Q +I++PTREL+ QIY+ A P +S K L GG + + +EG +LLIGT GR+ D + + ++D ++++VLDEADR+ D+GF K I ++ R+P Sbjct: 6 LTEITFAEL--GLEPQVLAGVEAKGFHNCTPIQAETIPLLLTGKNIAGQAQTGTGKTIAFLAGTFNYLLTHSASAERRQNQPRVLIMAPTRELAVQIYNDAVP-MSESCGFKMGLAYGGDGYDKQL-AVLQEGVDLLIGTTGRIIDYL-KQGIIDLGAIQVVVLDEADRMFDLGFIKDIRFLFRRMP 187
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: RHLB_SHEFN (ATP-dependent RNA helicase rhlB OS=Shewanella frigidimarina (strain NCIMB 400) GN=rhlB PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.609e-27 Identity = 76/199 (38.19%), Postives = 121/199 (60.80%), Query Frame = 3 Query: 90 LTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRR--ASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP--KLRRTGLFSS 674 L+ +F+D L +L AL E GFEFCTP+QA ++P+L + KD+A A TG+GKT+AF+V L A +RK + +I++PTREL+ QI A+ ++ +K ++ GG + + + ++G ++LIGT GR+ D + R V+ +++ +VLDEADR+ D+GF K I ++ R+P K R LFS+ Sbjct: 6 LSTKKFADFP--LKPEILAALNENGFEFCTPIQALSLPILLNAKDIAGQAQTGTGKTMAFLVATFNHLLNVAAPESRKATEPRAIIMAPTRELAIQIAKDAK-LLAAHTGLKVGIVYGGESYETQ-RAVLDKGVDILIGTTGRIIDYV-RQGVISLSHIQAVVLDEADRMFDLGFIKDIRFLFRRMPDAKSRLNMLFSA 199
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: RHLB_SHEAM (ATP-dependent RNA helicase rhlB OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=rhlB PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.609e-27 Identity = 78/199 (39.20%), Postives = 123/199 (61.81%), Query Frame = 3 Query: 90 LTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVE--ILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP--KLRRTGLFSS 674 LT+ +F+DL L + V +AL E GFE CTP+QA ++P+L KD+A A TG+GKTLAF+V + R+ +Q ++++PTREL+ QI A +S +K ++ GG +A +K+ ++G ++LIGT GR+ D + R V++ ++ +VLDEADR+ D+GF K I ++ +R+P K R LFS+ Sbjct: 6 LTQQKFADLP--LCDEVKQALNENGFEHCTPIQALSLPVLLEKKDIAGQAQTGTGKTLAFLVATFNHLLTTPVPEHRQLNQPRAIVMAPTRELAIQIAKDA-TLLSKHSGLKVGIVYGGEGYEAQ-RKVLDKGVDVLIGTTGRIIDYV-RQGVINLGAIQAVVLDEADRMFDLGFIKDIRFLFNRMPGAKERLNMLFSA 199
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: HAS1_ASPOR (ATP-dependent RNA helicase has1 OS=Aspergillus oryzae GN=has1 PE=3 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 1.609e-27 Identity = 81/212 (38.21%), Postives = 128/212 (60.38%), Query Frame = 3 Query: 57 TVRMESNPNKALTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSAR-KPHQIMG-MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP-KLRRTGLFSSYST 683 T+R+ P + +F++L LSE ++ + GFE T VQ TIP L + +DV A TGSGKTL+F++P +E+L S+ R KP G +I+SPTREL+ QI+ + ++ ++ +GG +A+ +K+ + G NLL+ TPGRL D ++ F+NL L++DEADR+L++GF+ ++ I LP + R+T LFS+ T Sbjct: 108 TIRL---PQQDGDPVKFTEL--GLSEKTMKGIEGMGFETMTEVQRRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAIEML---SALRFKPRNGTGAIIVSPTRELALQIFGQVRELLAHHSQTYGIV-IGGANRRAEAEKLMK-GVNLLVATPGRLLDHLQNTQGFVFKNLRTLIIDEADRILEVGFEDEMRQIAKILPSENRQTMLFSATQT 309
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DBP4_CHAGB (ATP-dependent RNA helicase DBP4 OS=Chaetomium globosum GN=DBP4 PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.609e-27 Identity = 77/191 (40.31%), Postives = 112/191 (58.64%), Query Frame = 3 Query: 102 RFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSS 674 +F+DL L E L + FE T VQ A IPL +D+ A TGSGKTLAF+VP++E L A + +IISPTREL+ QI+ V + I + L++GG +K + +++ N+L+ TPGR+ +++ D NL+ILVLDEADR++DMGFQ + ++ LP R+T LFS+ Sbjct: 54 QFTDLP--LCEATASGLRASHFEVLTDVQRAAIPLALKGRDILGAAKTGSGKTLAFLVPVLEKLYHAKWTEYDG-LGALIISPTRELAVQIFEVLRK-IGRNHFFSAGLVIGGKSLKEEAERLGR--MNILVCTPGRMLQHLDQTANFDVNNLQILVLDEADRIMDMGFQSAVDALVEHLPTTRQTLLFSA 238
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: RRP3_NEOFI (ATP-dependent rRNA helicase rrp3 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=rrp3 PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.102e-27 Identity = 78/207 (37.68%), Postives = 120/207 (57.97%), Query Frame = 3 Query: 69 ESNPNKALTETR-----FSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSS 674 E+ A TETR F DL + + + EA G++ TP+QA +IPL +D+ A TGSGKT AF +P+++ L KP G+I++PTREL+ QI + ST+ +V+ ++VGG+++ + + ++ ++++ TPGRL D +E R L+ LV+DEADRLLDM F + I+ LP+ RRT LFS+ Sbjct: 37 ETQDEAAATETRPAPKSFKDL--GIIDQLCEACETMGYKAPTPIQAESIPLALQGRDLIGLAETGSGKTAAFALPILQALME-----KPQSFFGLILAPTRELAFQISKSFESLGSTI-NVRCAVIVGGMDMVSQSIALGKK-PHIIVATPGRLLDHLENTKGFSLRTLKYLVMDEADRLLDMDFGPLLDKILKVLPRERRTFLFSA 234
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: RHLB_VIBFM (ATP-dependent RNA helicase rhlB OS=Vibrio fischeri (strain MJ11) GN=rhlB PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.102e-27 Identity = 72/187 (38.50%), Postives = 115/187 (61.50%), Query Frame = 3 Query: 90 LTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVE--ILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP 644 +TE F+DL L V++ L GF CTP+QA +P+L + +D+A A TG+GKTLAF+ + A RK Q +I++PTREL+ QI++ A+ I++ +K+ L GG + +++ E+G ++LIGT GR+ D ++ + DF+ ++ +VLDEADR+ D+GF K I +I R+P Sbjct: 6 ITEQNFADL--GLQPQVIDGLNAKGFIKCTPIQAKALPVLLAGQDIAGQAQTGTGKTLAFLTATFNHLLTTPAPEGRKITQPRAIIMAPTRELAIQIFNDAESLIAS-TGLKAALAYGGERYEKQ-QQVIEQGVDILIGTTGRIIDFYKQGHI-DFKMIQAVVLDEADRMFDLGFIKDIRFIFRRMP 187 The following BLAST results are available for this feature:
BLAST of FC868819 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868819 ID=FC868819; Name=FC868819; organism=Citrus clementina; type=EST; length=685bpback to top |