FC868819
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DBP3_ASPFU (ATP-dependent RNA helicase dbp3 OS=Aspergillus fumigatus GN=dbp3 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.357e-23 Identity = 72/174 (41.38%), Postives = 106/174 (60.92%), Query Frame = 3 Query: 159 AGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLV-EILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP-KLRRTGLFSS 674 + F TP+Q+AT PLL + +DV A TGSGKTLAF +P + +IL RK + +IISPTREL+ QIY F +++ D++ + GG VK D ++ + A +++ TPGRL D+ + V D ++ LVLDEADR+LD GF++ I II P R+T +F++ Sbjct: 103 SSFSSPTPIQSATWPLLFAGRDVIGIAETGSGKTLAFGLPCIKKILDSGKVKRKHARPAAVIISPTRELAMQIYDQLSKFGASV-DIRVTCIYGG--VKKDEQREALKTAAIVVATPGRLKDLKDDGSV-DLGKVKYLVLDEADRMLDKGFEQDIKDIIRSTPDSTRQTVMFTA 272
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: RH52B_ORYSJ (DEAD-box ATP-dependent RNA helicase 52B OS=Oryza sativa subsp. japonica GN=PL10B PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 6.997e-23 Identity = 68/175 (38.86%), Postives = 103/175 (58.86%), Query Frame = 3 Query: 177 TPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRA-----SSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPK----LRRTGLFSS 674 TPVQ IP+ + +D+ A TGSGKT AF P++ + R+ S + + +I+SPTRELS QI+ A+ F + VK V+ GG + ++++ E G +L+ TPGRL D++ER V + ++ L LDEADR+LDMGF+ QI I+ ++ R+T LFS+ Sbjct: 193 TPVQRYAIPISIAGRDLMACAQTGSGKTAAFCFPIISGIMRSRPPPRSRGSRTAYPLALILSPTRELSVQIHEEARKF-AYQTGVKVVVAYGGAPITQQLREL-ERGVEILVATPGRLMDLLERARV-SLQMIKYLALDEADRMLDMGFEPQIRKIVEQMDMPPRGERQTMLFSA 364
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: RH37_ORYSJ (DEAD-box ATP-dependent RNA helicase 37 OS=Oryza sativa subsp. japonica GN=PL10A PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 6.997e-23 Identity = 66/175 (37.71%), Postives = 104/175 (59.43%), Query Frame = 3 Query: 177 TPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPH-----QIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPK----LRRTGLFSS 674 TPVQ IP+ + +D+ A TGSGKT AF P++ + + ++P + +I+SPTRELS QI+ A+ F + V+ V+ GG + ++++ E G +L+ TPGRL D++ER V + ++ L LDEADR+LDMGF+ QI I+ ++ +R+T LFS+ Sbjct: 198 TPVQRYAIPISIAGRDLMACAQTGSGKTAAFCFPIISGIMSSRPPQRPRGSRTAYPLALILSPTRELSVQIHEEARKF-AYQTGVRVVVAYGGAPIHQQLREL-ERGVEILVATPGRLMDLLERARV-SLQMVKYLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSA 369
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DED1_SCHPO (ATP-dependent RNA helicase ded1 OS=Schizosaccharomyces pombe GN=ded1 PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 6.997e-23 Identity = 67/184 (36.41%), Postives = 108/184 (58.70%), Query Frame = 3 Query: 120 PALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKP-HQIMGM------------IISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYII 632 P L+ +L+ + +G+ TPVQ +IP++ S +D+ A TGSGKT F+ P++ + A P Q GM I++PTREL QI+ ++ F V+ + GG +++A +++I ++G +LL TPGRL D+++R + N++ LVLDEADR+LDMGF+ QI +I+ Sbjct: 174 PPLNSHLLQNIKLSGYTQPTPVQKNSIPIVTSGRDLMACAQTGSGKTAGFLFPILSLAFDKGPAAVPVDQDAGMGYRPRKAYPTTLILAPTRELVCQIHEESRKFCYR-SWVRPCAVYGGADIRAQIRQI-DQGCDLLSATPGRLVDLIDR-GRISLANIKFLVLDEADRMLDMGFEPQIRHIV 354
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DED1_NEOFI (ATP-dependent RNA helicase ded1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=ded1 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 6.997e-23 Identity = 71/203 (34.98%), Postives = 118/203 (58.13%), Query Frame = 3 Query: 120 PALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMG--------------MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYII--SRLPKL--RRTGLFSS 674 P L + ++ + A ++ TPVQ +IP++ + +D+ A TGSGKT F+ P++ + + P Q G +I++PTREL SQI+ A+ F + V+ ++ GG ++ + +++I E G +LL+ TPGRL D++ER + N++ LVLDEADR+LDMGF+ QI I+ +P + R+T +FS+ Sbjct: 195 PPLDDHLISNIKLARYQTPTPVQKYSIPIVMNGRDLMACAQTGSGKTGGFLFPILSQAFQTGPSAVPAQASGQFGYGRQRKAYPTSLILAPTRELVSQIFDEARKF-AYRSWVRPCVVYGGADIGSQLRQI-ERGCDLLVATPGRLVDLIER-GRISLVNIKYLVLDEADRMLDMGFEPQIRRIVEGEDMPNVNERQTLMFSA 394
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DED1_ASHGO (ATP-dependent RNA helicase DED1 OS=Ashbya gossypii GN=DED1 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 6.997e-23 Identity = 69/198 (34.85%), Postives = 117/198 (59.09%), Query Frame = 3 Query: 120 PALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQI---------MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIIS--RLPKL--RRTGLFSS 674 P L E +LE + A F TPVQ ++P++ +D+ A TGSGKT F+ P++ A P + ++++PTREL++QI+ A+ F + VK ++ GG +++ ++++ E G +L++ TPGRL D++ER + +++ LVLDEADR+LDMGF+ QI +I+ +P + R+T +FS+ Sbjct: 151 PPLDELLLENIKLARFTKPTPVQKYSVPIVAKGRDLMACAQTGSGKTGGFLFPVLSQSFSNGPASTPDESGYYMRKAYPTAVVLAPTRELATQIFDEAKKF-TYRSWVKPCVVYGGADIRQQIREL-ERGCDLIVATPGRLNDLLER-GKISLCSVKYLVLDEADRMLDMGFEPQIRHIVEGCDMPTVENRQTLMFSA 345
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DDX46_DICDI (ATP-dependent RNA helicase ddx46 OS=Dictyostelium discoideum GN=helB1 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 6.997e-23 Identity = 65/185 (35.14%), Postives = 109/185 (58.92%), Query Frame = 3 Query: 126 LSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIM--ERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSS 674 L+E V L + +E T +QA TIP + + +D+ A TGSGKTLAF++P+ + + ++ +I+SPTREL+ QI HV S + +++ + GG + + ++ + GA++++ TPGR+ DI+ + + R + LVLDEADR+ DMGF QI+ I+ + R+T +FS+ Sbjct: 516 LTEKVHLLLKKFQYEKPTSIQAQTIPAIMNGRDLIGIARTGSGKTLAFLLPMFRHILAQPKSAPGEGMIALIMSPTRELALQI-HVECKKFSKVLGLRTACVYGGASISEQIAEL-KRGADIVVCTPGRMIDILCANNRRITNLRRVTFLVLDEADRMFDMGFGPQINCIVDSIRPDRQTIMFSA 698
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DDX3Y_PONAB (ATP-dependent RNA helicase DDX3Y OS=Pongo abelii GN=DDX3Y PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 6.997e-23 Identity = 74/208 (35.58%), Postives = 117/208 (56.25%), Query Frame = 3 Query: 105 FSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVE-------------ILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISYIISR---LPK-LRRTGLFSS 674 FSD+ + E ++ + + TPVQ IP++ +D+ A TGSGKT AF++P++ + R+ + ++++PTREL+ QIY A+ F S V+ ++ GG ++ ++ + E G +LL+ TPGRL D+MER + LDF + LVLDEADR+LDMGF+ QI I+ + PK +R T +FS+ Sbjct: 180 FSDID--MGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKF-SYRSRVRPCVVYGGADIGQQIRDL-ERGCHLLVATPGRLVDMMERGKIGLDF--CKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSA 381
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DDX3Y_HUMAN (ATP-dependent RNA helicase DDX3Y OS=Homo sapiens GN=DDX3Y PE=1 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 6.997e-23 Identity = 74/208 (35.58%), Postives = 117/208 (56.25%), Query Frame = 3 Query: 105 FSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVE-------------ILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISYIISR---LPK-LRRTGLFSS 674 FSD+ + E ++ + + TPVQ IP++ +D+ A TGSGKT AF++P++ + R+ + ++++PTREL+ QIY A+ F S V+ ++ GG ++ ++ + E G +LL+ TPGRL D+MER + LDF + LVLDEADR+LDMGF+ QI I+ + PK +R T +FS+ Sbjct: 180 FSDID--MGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKF-SYRSRVRPCVVYGGADIGQQIRDL-ERGCHLLVATPGRLVDMMERGKIGLDF--CKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSA 381
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DBP3_EMENI (ATP-dependent RNA helicase dbp3 OS=Emericella nidulans GN=dbp3 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 6.997e-23 Identity = 69/172 (40.12%), Postives = 106/172 (61.63%), Query Frame = 3 Query: 162 GFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP-KLRRTGLFSS 674 GF T +Q+AT PLL + +DV A TGSGKTLAF +P ++ + + +K + + ++ISPTREL+ QIY F + D++ + GG VK D ++ + A +++ TPGRL D ++ LD ++ LVLDEADR+LD GF++ I IIS +P R+T +F++ Sbjct: 92 GFASPTAIQSATWPLLFAGRDVIGIAETGSGKTLAFGLPCLKKVLDLKTKQKSCRPLAVVISPTRELAMQIYDQLVKFAEKV-DIQVACIFGG--VKKDEQREALKSAAVVVATPGRLKD-LQNDGSLDLGRVKYLVLDEADRMLDKGFEQDIKDIISPMPVSKRQTVMFTA 259 The following BLAST results are available for this feature:
BLAST of FC868819 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868819 ID=FC868819; Name=FC868819; organism=Citrus clementina; type=EST; length=685bpback to top |