FC868819
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: HAS1_ASPCL (ATP-dependent RNA helicase has1 OS=Aspergillus clavatus GN=has1 PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.653e-30 Identity = 84/197 (42.64%), Postives = 126/197 (63.96%), Query Frame = 3 Query: 102 RFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSAR-KPHQIMG-MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP-KLRRTGLFSSYST 683 +F++L LSE L+A+ E GFE T +Q TIP L + +DV A TGSGKTL+F++P VE+L S+ R KP G +++SPTREL+ QI+ VA+ ++ +GG +A+ +K+ + G NLLI TPGRL D ++ F+NL+ LV+DEADR+L++GF+ ++ I+ LP + R+T LFS+ T Sbjct: 144 KFTEL--GLSEKTLKAINEMGFETMTEIQRRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAVEML---SALRFKPRNGTGVLVVSPTRELALQIFGVARELCQHHSQTYGIV-IGGANRRAEAEKLMK-GVNLLIATPGRLLDHLQNTQGFVFKNLKTLVIDEADRILEVGFEDEMRQIVKILPSEERQTMLFSATQT 333
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: HAS1_ASPTN (ATP-dependent RNA helicase has1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=has1 PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.464e-30 Identity = 83/197 (42.13%), Postives = 124/197 (62.94%), Query Frame = 3 Query: 102 RFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSAR-KPHQIMGMII-SPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP-KLRRTGLFSSYST 683 +F +L LSEP ++A+ + GFE T +Q TIP + +D+ A TGSGKTLAF++P VE+L S+ R KP G+II +PTREL+ QI+ VA+ ++ +GG +A+ +K+ + G NLLI TPGRL D ++ ++N ++LVLDEADR LD+GF+ ++ I+ LP + R+T LFS+ T Sbjct: 99 KFDELN--LSEPTMKAIRQMGFETMTEIQQRTIPPTLAGRDILGAAKTGSGKTLAFLIPAVEML---SALRFKPRNGTGVIIITPTRELALQIFGVAKELCEFHSQTYGIV-IGGANRRAEAEKLNK-GVNLLIATPGRLLDHLQNTQGFVYKNCKVLVLDEADRCLDVGFEAELRQIVKILPSEERQTLLFSATQT 288
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DBP4_YEAST (ATP-dependent RNA helicase DBP4 OS=Saccharomyces cerevisiae GN=DBP4 PE=1 SV=2) HSP 1 Score: 131.724 bits (330), Expect = 3.464e-30 Identity = 83/190 (43.68%), Postives = 118/190 (62.11%), Query Frame = 3 Query: 105 FSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSS 674 F DL +S+P L+ L E+ F T +QA +IP+ DV A TGSGKTLAF+VP++E L R + +IISPTREL+ QIY V I + + L++GG +VK ++++I N+LIGTPGR+ +++ L+ NL++LVLDEADR LDMGF+K + I+S L R+T LFS+ Sbjct: 43 FKDLP--ISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFLVPVIEKLYREKWTEFDG-LGALIISPTRELAMQIYEVLTK-IGSHTSFSAGLVIGGKDVKFELERISR--INILIGTPGRILQHLDQAVGLNTSNLQMLVLDEADRCLDMGFKKTLDAIVSTLSPSRQTLLFSA 226
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DBP4_YEAS7 (ATP-dependent RNA helicase DBP4 OS=Saccharomyces cerevisiae (strain YJM789) GN=DBP4 PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.464e-30 Identity = 83/190 (43.68%), Postives = 118/190 (62.11%), Query Frame = 3 Query: 105 FSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSS 674 F DL +S+P L+ L E+ F T +QA +IP+ DV A TGSGKTLAF+VP++E L R + +IISPTREL+ QIY V I + + L++GG +VK ++++I N+LIGTPGR+ +++ L+ NL++LVLDEADR LDMGF+K + I+S L R+T LFS+ Sbjct: 43 FKDLP--ISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFLVPVIEKLYREKWTEFDG-LGALIISPTRELAMQIYEVLTK-IGSHTSFSAGLVIGGKDVKFELERISR--INILIGTPGRILQHLDQAVGLNTSNLQMLVLDEADRCLDMGFKKTLDAIVSTLSPSRQTLLFSA 226
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DBP4_DEBHA (ATP-dependent RNA helicase DBP4 OS=Debaryomyces hansenii GN=DBP4 PE=3 SV=2) HSP 1 Score: 131.724 bits (330), Expect = 3.464e-30 Identity = 81/192 (42.19%), Postives = 117/192 (60.94%), Query Frame = 3 Query: 99 TRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSS 674 ++FSDL +SE L EA F T +Q TIP+ +DV A TGSGKTLAF++P +E L R + + + +IISPTREL+ QI+ V I + + L+ GG +VK + +++ + N+L+GTPGR+ + ++ NL++LVLDEADR LDMGF+KQI I+ LP R+T LFS+ Sbjct: 46 SQFSDLP--ISEETARGLKEASFASLTDIQKKTIPISLKGEDVMGTAKTGSGKTLAFLIPTIESLIR-NKITEYDGLAALIISPTRELAVQIFEVLVK-IGKHNNFSAGLVTGGKDVKYEKERVSK--MNILVGTPGRISQHLNESVGMETSNLQVLVLDEADRCLDMGFKKQIDNILGHLPPTRQTLLFSA 231
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DBP4_NEUCR (ATP-dependent RNA helicase dbp-4 OS=Neurospora crassa GN=dbp-4 PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.525e-30 Identity = 82/204 (40.20%), Postives = 121/204 (59.31%), Query Frame = 3 Query: 63 RMESNPNKALTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSS 674 R++ K+ +FSDL L EP L + FE T VQ A IPL +D+ A TGSGKTLAF+VP++E L RA + +IISPTREL+ QI+ V + I + L++GG +K + +++ N+L+ TPGR+ +++ D NL++LVLDEADR++DMGFQ+ + ++ LPK R+T LFS+ Sbjct: 45 RIDELDPKSTELNKFSDLP--LCEPTASGLRASHFEVLTDVQRAAIPLALKGQDILGAARTGSGKTLAFLVPVLEKLYRARWTEYDG-LGALIISPTRELAVQIFEVLRK-IGRNHSFSAGLVIGGKSLKEEAERLGR--MNILVCTPGRMLQHLDQTAGFDVDNLQMLVLDEADRIMDMGFQQAVDALVEHLPKSRQTLLFSA 242
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: HAS1_YEAST (ATP-dependent RNA helicase HAS1 OS=Saccharomyces cerevisiae GN=HAS1 PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.910e-30 Identity = 82/196 (41.84%), Postives = 125/196 (63.78%), Query Frame = 3 Query: 102 RFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMI-ISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP-KLRRTGLFSSYST 683 +F +LK LS+P L+A+ + GF T VQA TIP L + +DV A TGSGKTLAF++P +E+L S KP G+I I+PTREL+ QI+ VA+ + + ++GG + + +K+ +G N+LI TPGRL D ++ F+NL+ L++DEADR+L++GF+ ++ II LP + R++ LFS+ T Sbjct: 43 KFEELK--LSQPTLKAIEKMGFTTMTSVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLH--SLKFKPRNGTGIIVITPTRELALQIFGVARELMEFHSQTFGI-VIGGANRRQEAEKL-MKGVNMLIATPGRLLDHLQNTKGFVFKNLKALIIDEADRILEIGFEDEMRQIIKILPNEDRQSMLFSATQT 232
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: HAS1_SCHPO (ATP-dependent RNA helicase has1 OS=Schizosaccharomyces pombe GN=has1 PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.910e-30 Identity = 84/196 (42.86%), Postives = 123/196 (62.76%), Query Frame = 3 Query: 102 RFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMII-SPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP-KLRRTGLFSSYST 683 +FSDL+ LSE + +A+ E GFE T +Q +IP L + +DV A TGSGKTLAF++P +E+L KP G+II SPTREL+ QI+ VA+ + ++ +GG +A+ K+ + G NLL+ TPGRL D ++ FRNL LV+DEADR+L++GF+ ++ I+ LP + R+T LFS+ T Sbjct: 90 KFSDLQ--LSENIQKAIKEMGFETMTEIQKRSIPPLLAGRDVLGAAKTGSGKTLAFLIPTIEMLYALKF--KPRNGTGVIIISPTRELALQIFGVAKELLKYHHQTFGIV-IGGANRRAEADKLVK-GVNLLVATPGRLLDHLQNTKGFVFRNLRSLVIDEADRILEIGFEDEMRQIMKILPSENRQTLLFSATQT 279
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: HAS1_ASPFU (ATP-dependent RNA helicase has1 OS=Aspergillus fumigatus GN=has1 PE=3 SV=2) HSP 1 Score: 130.954 bits (328), Expect = 5.910e-30 Identity = 84/197 (42.64%), Postives = 126/197 (63.96%), Query Frame = 3 Query: 102 RFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSAR-KPHQIMGMII-SPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP-KLRRTGLFSSYST 683 +F++L LSE L+A+ + GFE T +Q TIP L + +DV A TGSGKTL+F++P VE+L S+ R KP G+I+ SPTREL+ QI+ VA+ ++ +GG +A+ +K+ + G NLLI TPGRL D ++ F+NL+ LV+DEADR+L++GF+ ++ I+ LP + R+T LFS+ T Sbjct: 141 KFTEL--GLSEKTLKAINDMGFETMTEIQRRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAVEML---SALRFKPRNGTGVIVVSPTRELALQIFGVARELCQYHSQTYGIV-IGGANRRAEAEKLMK-GVNLLIATPGRLLDHLQNTQGFVFKNLKTLVIDEADRILEVGFEDEMRQIVKILPSEERQTMLFSATQT 330
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DRS1_USTMA (ATP-dependent RNA helicase DRS1 OS=Ustilago maydis GN=DRS1 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.910e-30 Identity = 76/189 (40.21%), Postives = 114/189 (60.32%), Query Frame = 3 Query: 126 LSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMG--MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPK-LRRTGLFSSYST 683 LS PVL AL+ F TP+Q+ TIP+ + KD+ A TGSGKT AF++P +E L + R PH+ +I++PTREL+ Q Y V + I+ D++ L VGG+ VK+ +++ ++I TPGRL D + ++EILV+DEADR+L+ GF +++ I+ PK R+T LFS+ T Sbjct: 340 LSRPVLRALSSLSFHKPTPIQSRTIPIALAGKDIVAGAVTGSGKTAAFMIPTIERLTWRAKTRTPHEAKSRVLILAPTRELAIQCYSVGKS-IAKFTDIRFCLCVGGLSVKSQEAELKLR-PEVVIATPGRLIDHVRNSASFTLDDIEILVMDEADRMLEDGFADELNEIVKSCPKGARQTMLFSATMT 526 The following BLAST results are available for this feature:
BLAST of FC868819 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868819 ID=FC868819; Name=FC868819; organism=Citrus clementina; type=EST; length=685bpback to top |