FC868825
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868825 vs. ExPASy Swiss-Prot
Match: CHI9_ORYSJ (Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht9 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 5.374e-35 Identity = 88/223 (39.46%), Postives = 117/223 (52.47%), Query Frame = 2 Query: 65 SVADLVTPEFFDGIK-NQAPATCEGKGFYTRDAFISALSSYPEFGRTDT----KREVAAFFAHVTHETTD-------------FCFVEEISKTNPYCTPTPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMR------YVHSALN---------------QGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYC 616 +V +V+ E F+ + ++ A C +GFYT DA ++A +++P+F T KREVAAF +HETT +CF EEI T YC P+ ++PCA K Y+GRGPIQL+ N NY AG AIG D LN+PE VA D V+SFKTALW+WM H + G+G ING ECG +V +R+ Y YC Sbjct: 85 AVEAVVSKELFEQLLLHRNDAACPARGFYTYDALVTAAAAFPDFAATGDDEARKREVAAFLGQTSHETTGGWATAPDGPYSWGYCFKEEIGATASYCVPSAEWPCAPDKKYFGRGPIQLSYNYNYGPAGEAIGEDLLNNPELVASDPVVSFKTALWFWMTPQSPKPSCHDVITGQWTPSSGDIAAGRVPGYGVITNIINGGLECGFGPDDRVANRIGFYQRYC 307
BLAST of FC868825 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 7.019e-35 Identity = 84/224 (37.50%), Postives = 120/224 (53.57%), Query Frame = 2 Query: 62 NSVADLVTPEFFDGIK-NQAPATCEGKGFYTRDAFISALSSYPEFGRTDT----KREVAAFFAHVTHETTD-------------FCFVEEISKTNPYCTPTPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM---------------RYVHSALN------QGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYC 616 + V +V + F+ + ++ C +GFYT +AF++A +++P FG T KREVAAF +HETT +CF +E + + YC P+P++PCA G+ YYGRGPIQL+ N NY AGRAIG D L++P+ VA D +SFKTALW+WM R+ S + G+G +NG ECG +V +R+ Y YC Sbjct: 87 DGVGSIVPRDLFERLLLHRNDGACPARGFYTYEAFLAAAAAFPAFGGTGNTETRKREVAAFLGQTSHETTGGWPTAPDGPFSWGYCFKQEQNPPSDYCQPSPEWPCAPGRKYYGRGPIQLSFNFNYGPAGRAIGVDLLSNPDLVATDATVSFKTALWFWMTPQGNKPSSHDVITGRWAPSPADAAAGRAPGYGVITNIVNGGLECGHGPDDRVANRIGFYQRYC 310
BLAST of FC868825 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 1.564e-34 Identity = 84/223 (37.67%), Postives = 116/223 (52.02%), Query Frame = 2 Query: 68 VADLVTPEFFDG-IKNQAPATCEGKGFYTRDAFISALSSYPEFGRTDT----KREVAAFFAHVTHETTD--------------FCFVEEISKTNPYCTPTPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMR------YVHSAL---------------NQGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYC 616 + +L++ E F+ + ++ C +GFYT DAFI+A S+P F T KRE+AAF A +HETT +C+ E++ + YC P YPCA GK Y+GRGP+QL+ N NY GRAIG D LN+P+ ++ D ISFK+A W+WM H+ + G+G ING ECG AQV+DR+ Y YC Sbjct: 52 LTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWAAPDGPYAWGYCYNRELNPPSSYCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSSDRAAGRATGYGVITNIINGGLECGKGWNAQVEDRIGFYKRYC 274
BLAST of FC868825 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.564e-34 Identity = 91/223 (40.81%), Postives = 116/223 (52.02%), Query Frame = 2 Query: 77 LVTPEFFDG-IKNQAPATCEGKGFYTRDAFISALSSYPEFGRTDT----KREVAAFFAHVTHETTD--------------FCFVEEISKTNPYCTPTPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM---------------RYVHSALNQ------GFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRL 625 L+T E FD + ++ C +GFYT DAFI+A S+P F T KREVAAF A +HETT +C+ E++ + YC P YPCA GK Y+GRGP+QLT N NY GRAIG D LN+P+ +A D ISFK+A W+WM + S +Q GFG ING ECG A+V+DR+ Y YC L Sbjct: 75 LITRERFDQMLLHRNDGGCPARGFYTYDAFIAAAKSFPAFATTGDDATRKREVAAFLAQTSHETTGGAGWAAPDGPYTWGYCYNRELNPAD-YCQWDPNYPCAPGKQYFGRGPMQLTWNYNYGQCGRAIGVDLLNNPDLLATDPTISFKSAFWFWMTPQSPKPSCHDVIIGAWSPSGSDQAAGRVPGFGLITNIINGGLECGQGWNAKVEDRIGFYKRYCDTL 296
BLAST of FC868825 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.042e-34 Identity = 84/223 (37.67%), Postives = 116/223 (52.02%), Query Frame = 2 Query: 68 VADLVTPEFFDG-IKNQAPATCEGKGFYTRDAFISALSSYPEFGRTDT----KREVAAFFAHVTHETTD--------------FCFVEEISKTNPYCTPTPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMR------YVHSAL---------------NQGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYC 616 + +L++ E F+ + ++ C +GFYT DAFI+A S+P F T KRE+AAF A +HETT +C+ E++ + YC P YPCA GK Y+GRGP+QL+ N NY GRAIG D LN+P+ ++ D ISFK+A W+WM H+ + G+G ING ECG AQV+DR+ Y YC Sbjct: 74 LTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWAAPDGPYAWGYCYNRELNPPSSYCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSSDRAAGRVPGYGVITNIINGGLECGKGWNAQVEDRIGFYKRYC 296
BLAST of FC868825 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.014e-33 Identity = 87/229 (37.99%), Postives = 119/229 (51.97%), Query Frame = 2 Query: 62 NSVADLVTPEFFDG-IKNQAPATCEGKGFYTRDAFISALSSYPEFGRTDT----KREVAAFFAHVTHETTD-------------FCFVEEISKT--NPYCTPTPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMR------YVHSALN---------------QGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRL 625 + VA +V+ FD + ++ A C K FYT DAF++A +++P F T KREVAAF A +HETT +CF EE + + YC + Q+PCA GK YYGRGPIQ++ N NY AG+AIG + L++P+ VA D +SFKTA W+WM H+ + G+G ING ECG ++V DR+ Y YC L Sbjct: 77 SGVASIVSRSLFDQMLLHRNDAACPAKNFYTYDAFVAAANAFPSFATTGDAATRKREVAAFLAQTSHETTGGWATAPDGPYSWGYCFKEENNGNVGSDYCVQSSQWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGSNLLSNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVMTGQWTPNGNDQAAGRVPGYGVVTNIINGGVECGHGADSRVADRIGFYKRYCDML 305
BLAST of FC868825 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 8.580e-33 Identity = 91/233 (39.06%), Postives = 117/233 (50.21%), Query Frame = 2 Query: 38 IPRNVVCQNSVADLVTPEFFDG-IKNQAPATCEGKGFYTRDAFISALSSYPEFGRTDT----KREVAAFFAHVTHETTD-------------FCFVEEISKTNPYCTPTPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM---------------RYVHSALNQ------GFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCK 619 IP V LV FD +K + C G GFYT DAFI+A S+ FG T K+E+AAF A +HETT +CFV E + YC+P +PCA GK YYGRGPIQLT N NY AG+AI D +N+P+ ++ + +SFKTA+W+WM R+ SA + G+G ING ECG +V DRV Y YC+ Sbjct: 70 IPTPSTGGGDVGRLVPSSLFDQMLKYRNDGRCAGHGFYTYDAFIAAARSFNGFGTTGDDNTKKKELAAFLAQTSHETTGGWPTAPDGPYAWGYCFVSEQNTQEVYCSPK-DWPCAPGKKYYGRGPIQLTHNYNYGLAGQAIKEDLINNPDLLSTNPTVSFKTAIWFWMTPQANKPSSHDVITGRWTPSAADSSAGRVPGYGVITNIINGGIECGHGQDNRVDDRVGFYKRYCQ 301
BLAST of FC868825 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2) HSP 1 Score: 139.813 bits (351), Expect = 1.121e-32 Identity = 91/227 (40.09%), Postives = 116/227 (51.10%), Query Frame = 2 Query: 62 NSVADLVTPEFFDG-IKNQAPATCEGKGFYTRDAFISALSSYPEF----GRTDT-KREVAAFFAHVTHETTD-------------FCFVEEISKTN--PYCTPTPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM---------------RYVHSALNQ------GFGETIRKINGPAECGGQNRAQVQDRVRRYTDYC 616 + VA +V+ FD + ++ A C FYT DAF++A S++P F G DT KREVAAF A +HETT +CF EE YC + Q+PCA GK YYGRGPIQL+ N NY AG+AIG D L P+ VA D +SF TA W+WM ++ SA +Q G+G ING ECG +V DR+ Y YC Sbjct: 79 SGVASIVSRSLFDQMLLHRNDAACPASNFYTYDAFVAAASAFPGFAAAGGDADTNKREVAAFLAQTSHETTGGWATAPDGPYAWGYCFKEENGGAAGPDYCQQSAQWPCAAGKKYYGRGPIQLSYNFNYGPAGQAIGADLLGDPDLVASDATVSFDTAFWFWMTPQSPKPSCHAVATGQWTPSADDQAAGRVPGYGVITNIINGGLECGHGEDDRVADRIGFYKRYC 305
BLAST of FC868825 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.911e-32 Identity = 84/226 (37.17%), Postives = 118/226 (52.21%), Query Frame = 2 Query: 65 SVADLVTPEFFDGIK-NQAPATCEGKGFYTRDAFISALSSYPEFGRT-DTK---REVAAFFAHVTHETTD-------------FCFVEEISKTNPYCTPTPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM---------------RYVHSALNQ------GFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRL 625 +++ L++ F+ I ++ C KGFYT +AFI+A ++ FG T DT +E+AAF A +HETT +C+ E YC + Q+PCA GK Y+GRGPIQ++ N NY AG AIG + LN+P+ VA D V+SFKTALW+WM R+ S + GFG ING EC + A + +R+ Y YC+ L Sbjct: 4 NISSLISKNLFERILVHRNDRACGAKGFYTYEAFITATKTFAAFGTTGDTNTRNKEIAAFLAQTSHETTGGWATAPDGPYSWGYCYNREQGSPGDYCASSQQWPCAPGKKYFGRGPIQISYNYNYGAAGSAIGVNLLNNPDLVANDAVVSFKTALWFWMTAQQPKPSAHDVITGRWSPSVADSAPGRVPGFGVITNIINGGMECNSGSNALMDNRIGFYRRYCQIL 229
BLAST of FC868825 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 4.258e-32 Identity = 85/209 (40.67%), Postives = 112/209 (53.59%), Query Frame = 2 Query: 68 VADLVTPEFFDG-IKNQAPATCEGKGFYTRDAFISALSSYPEFGRT--DT--KREVAAFFAHVTHETTDFCFVEEISKTNPYCTPTPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM---------------RYVHSALN------QGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYC 616 V +VT + F+ +KN+ C KGFYT DAFI+A +S+P FG T DT K+E+AAFF +HETT + YC +G +YGRGPIQLTG NY AG+AIG D +N+P+ VA D +SFKTA+W+WM ++ SA + G+G ING ECG QV+DR+ Y YC Sbjct: 19 VGTIVTSDLFNEMLKNRNDDRCPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGSLSADGPFAGGYCFVREGNQMGSG--FYGRGPIQLTGQSNYDLAGQAIGQDLVNNPDLVATDATVSFKTAIWFWMTAQGNKPSCHDVITGQWTPSAADASANRQPGYGVITNIINGGIECGKGQNPQVEDRIGFYRRYC 225 The following BLAST results are available for this feature:
BLAST of FC868825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868825 ID=FC868825; Name=FC868825; organism=Citrus clementina; type=EST; length=638bpback to top |