FC868829

Overview
NameFC868829
Unique NameFC868829
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length661
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14506 contig Ccv1_Contig14506:306..966. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868829 vs. ExPASy Swiss-Prot
Match: DGP14_ARATH (Putative protease Do-like 14 OS=Arabidopsis thaliana GN=DEGP14 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.151e-11
Identity = 51/161 (31.68%), Postives = 80/161 (49.69%), Query Frame = 3
Query:  102 ITNLAARQDAFTLDVLEVPQGS---------GSGFVWDSKGHVVTNYHVIRGASDIR--------VTFADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAIN 533
            I N AAR     ++ L VPQG          GSG + D+ G ++T  HV+    +IR        VT  D   ++  +V  D   D+A+++I + K  L    +G S+ L  G  V A+G P  L +T+T G++S + R+ S    G   ++ +QTD +IN
Sbjct:  149 IANAAARIGPAVVN-LSVPQGFHGISMGKSIGSGTIIDADGTILTCAHVVVDFQNIRHSSKGRVDVTLQDGRTFEGVVVNADLQSDIALVKIKS-KTPLPTAKLGFSSKLRPGDWVIAVGCPLSLQNTVTAGIVSCVDRKSSDLGLGGKHREYLQTDCSIN 307          
BLAST of FC868829 vs. ExPASy Swiss-Prot
Match: HTRA2_DROAN (Serine protease HTRA2, mitochondrial OS=Drosophila ananassae GN=HtrA2 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.503e-11
Identity = 43/128 (33.59%), Postives = 68/128 (53.12%), Query Frame = 3
Query:  153 VPQGSGSGFVWDSKGHVVTNYHVI--RGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAI 530
            +   +GSGF+ +  G ++TN HV+  +  + ++V  +D   + A I   DQ  D+A LRI      L  + +G S+ L  G+ V A+G+P  L +T+T GVIS  +R            + +QTDAAI
Sbjct:  140 ITASNGSGFIIEQNGLILTNAHVVINKPHTMVQVRLSDGRTFPATIEDVDQTSDLATLRIQV--SNLSVMRLGKSSTLRSGEWVVALGSPLALSNTVTAGVISSTQRASQELGLRNRDINYLQTDAAI 265          
BLAST of FC868829 vs. ExPASy Swiss-Prot
Match: HTRA2_DROPS (Serine protease HTRA2, mitochondrial OS=Drosophila pseudoobscura pseudoobscura GN=HtrA2 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.963e-11
Identity = 44/128 (34.38%), Postives = 68/128 (53.12%), Query Frame = 3
Query:  153 VPQGSGSGFVWDSKGHVVTNYHVI--RGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAI 530
            +   +GSGFV +  G ++TN HV+  +  + ++V  +D   + A I   DQ  D+A LRI      L  + +G S+ L  G+ V A+G+P  L +T+T GVIS  +R            + +QTDAAI
Sbjct:  141 ITASNGSGFVIEQNGLILTNAHVVINKPHTMVQVRLSDGRTFPATIEDVDQTSDLATLRIQV--SGLPVMKLGKSSTLRSGEWVVALGSPLALSNTVTAGVISATQRASQELGLRNRDINYLQTDAAI 266          
BLAST of FC868829 vs. ExPASy Swiss-Prot
Match: HTRA2_DROPE (Serine protease HTRA2, mitochondrial OS=Drosophila persimilis GN=HtrA2 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.564e-11
Identity = 44/128 (34.38%), Postives = 68/128 (53.12%), Query Frame = 3
Query:  153 VPQGSGSGFVWDSKGHVVTNYHVI--RGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAI 530
            +   +GSGFV +  G ++TN HV+  +  + ++V  +D   + A I   DQ  D+A LRI      L  + +G S+ L  G+ V A+G+P  L +T+T GVIS  +R            + +QTDAAI
Sbjct:  141 ITASNGSGFVIEQNGLILTNAHVVINKPHTMVQVRLSDGRTFPATIEDVDQTSDLATLRIHV--SGLPVMKLGKSSTLRSGEWVVALGSPLALSNTVTAGVISATQRASQELGLRNRDINYLQTDAAI 266          
The following BLAST results are available for this feature:
BLAST of FC868829 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
DGP14_ARATH1.151e-1131.68Putative protease Do-like 14 OS=Arabidopsis thalia... [more]
HTRA2_DROAN1.503e-1133.59Serine protease HTRA2, mitochondrial OS=Drosophila... [more]
HTRA2_DROPS1.963e-1134.38Serine protease HTRA2, mitochondrial OS=Drosophila... [more]
HTRA2_DROPE2.564e-1134.38Serine protease HTRA2, mitochondrial OS=Drosophila... [more]

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Properties
Property NameValue
Genbank descriptionC31005C10EF AbioticL1 Citrus clementina cDNA clone C31005C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868829 ID=FC868829; Name=FC868829; organism=Citrus clementina; type=EST; length=661bp
ATTCCGCGTCGGCTTTCGTCGTCTCTCCGCAACGTAAGCTTCAAACCGAC
GAACTCGCTACCGTTCGTCTCTTTCAAGAGAACACTCCTTCTGTTGTTAA
TATCACCAATCTTGCTGCCAGGCAGGATGCATTTACACTGGATGTGTTGG
AGGTCCCACAAGGATCCGGTTCGGGTTTTGTCTGGGATTCCAAAGGTCAC
GTTGTCACCAATTATCATGTGATTCGTGGTGCTTCTGATATCAGGGTCAC
TTTTGCTGATCAATCAGCTTATGATGCGAAAATTGTTGGATTTGACCAAG
ACAAGGATGTTGCTGTGTTGCGTATTGATGCACCGAAAGATAAATTAAGA
CCTATTCCTATTGGTGTCTCTGCAGACTTGCTTGTTGGTCAGAAAGTATA
TGCTATTGGCAACCCCTTTGGACTCGACCATACCCTTACAACTGGCGTGA
TCAGTGGGCTTCGTAGGGAAATCAGTTCTGCAGCCACTGGCCGTCCAATT
CAGGATGTTATACAAACTGATGCGGCCATTAATCCTGGTAATAGTGGAGG
ACCACTTTTAGATAGTTCAGGAAGCCTAATTGGAATAAATACAGCTATAT
ACTCTCCATCTGGTGCATCCTCTGGTGTTGGATTTTCGATTCAGTTGACA
CTGTAAATGGC
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