FC868845

Overview
NameFC868845
Unique NameFC868845
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868845 vs. ExPASy Swiss-Prot
Match: XTH25_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis thaliana GN=XTH25 PE=2 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 5.961e-33
Identity = 75/177 (42.37%), Postives = 106/177 (59.89%), Query Frame = 2
Query:  155 FDEGYSHLFGHDNLVVHRDGKSVHLSLDE-TGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYM-SNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFP-AKPMSLYATIWDGSDWAT 676
            FD  +   +G     V  +G+ + LSLD  +GSGF +   YL G     +KL    +AG V A+Y+ S GD +    DEIDFEFLGN+ G  + + TN+Y  G     RE++++LWFDP+ DFH YS+LW    I+F +D IP+REFK    MG  +P  +PM LY+++W+   WAT
Sbjct:   30 FDTEFDITWGDGRGKVLNNGELLTLSLDRASGSGFQTKKEYLFGKIDMQLKLVPGNSAGTVTAYYLKSKGDTW----DEIDFEFLGNLTGDPYTMHTNVYTQGKGD--REQQFHLWFDPTADFHTYSVLWNPHHIVFMVDDIPVREFKNLQHMGIQYPKLQPMRLYSSLWNADQWAT 200          
BLAST of FC868845 vs. ExPASy Swiss-Prot
Match: XTH19_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 19 OS=Arabidopsis thaliana GN=XTH19 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 5.961e-33
Identity = 76/166 (45.78%), Postives = 101/166 (60.84%), Query Frame = 2
Query:  185 HDNLVVHRDGKSVHLSLDET-GSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAK-PMSLYATIWDGSDWAT 676
            HDN      GK + LSLD++ GSGF S+  +L+G     +KL    +AG V  FY+ +        DEIDFEFLGNI G  + + TN+Y  GS    +E++++LWFDP+ +FH Y I W   +IIF +DGIPIREF    S G  FP K PM LYA++W+   WAT
Sbjct:   40 HDN-----QGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKSPGT---TWDEIDFEFLGNISGHPYTLHTNVYTKGSGD--KEQQFHLWFDPTANFHTYCITWNPQRIIFTVDGIPIREFMNAESRGVPFPTKQPMRLYASLWEAEHWAT 195          
BLAST of FC868845 vs. ExPASy Swiss-Prot
Match: XTH15_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 15 OS=Arabidopsis thaliana GN=XTH15 PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.017e-32
Identity = 74/176 (42.05%), Postives = 105/176 (59.66%), Query Frame = 2
Query:  155 FDEGYSHLFGHDNLVVHRDGKSVHLSLDE-TGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFP-AKPMSLYATIWDGSDWAT 676
            FDE +   +G     +   G  + LSLD+ +GSGF S   YL G     +KL A  +AG V A+Y+S+       HDEIDFEFLGN  GK + + TN++  G     RE+++ LWFDP+ +FH YSI+W    IIF +D +PIR F     +G  FP ++PM +Y+++W+  DWAT
Sbjct:   29 FDE-FDLTWGDHRGKIFNGGNMLSLSLDQVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSQGA---THDEIDFEFLGNETGKPYVLHTNVFAQGKGD--REQQFYLWFDPTKNFHTYSIVWRPQHIIFLVDNLPIRVFNNAEKLGVPFPKSQPMRIYSSLWNADDWAT 198          
BLAST of FC868845 vs. ExPASy Swiss-Prot
Match: XTH21_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 21 OS=Arabidopsis thaliana GN=XTH21 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.328e-32
Identity = 74/167 (44.31%), Postives = 102/167 (61.08%), Query Frame = 2
Query:  182 GHDNLVVHRDGKSVHLSLDET-GSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPA-KPMSLYATIWDGSDWAT 676
            G  N++   +G  ++L LD++ GSGF S   YL+G     IKL    +AG V  FY+ +  +     DEIDFEFLGN+ G  + + TN+Y  G     RE+++ LWFDP+  FH YSILW  S I+FYIDG PIREFK    +G  +P  +PM +Y ++W+  DWAT
Sbjct:   39 GRGNIL--NNGTLLNLGLDQSSGSGFQSKAEYLYGKVDMQIKLVPGNSAGTVTTFYLKSQGL---TWDEIDFEFLGNVSGDPYIVHTNVYTQGKGD--REQQFYLWFDPTAAFHNYSILWNPSHIVFYIDGKPIREFKNLEVLGVAYPKNQPMRMYGSLWNADDWAT 198          
BLAST of FC868845 vs. ExPASy Swiss-Prot
Match: XTH9_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 9 OS=Arabidopsis thaliana GN=XTH9 PE=2 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 1.734e-32
Identity = 79/176 (44.89%), Postives = 104/176 (59.09%), Query Frame = 2
Query:  155 FDEGYSHLFGHDNLVVHRDGKSVHLSLDE-TGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPA-KPMSLYATIWDGSDWAT 676
            FDE Y   +  D+ V   +G+   L LD  +G+GF S   YL G  S  IKL    +AG V AFYMS+      NH+E DFEFLGN  G+ + +QTNIY NG  +  RE+R NLWFDP+ +FH YSILW+   ++F +D  PIR  K     G  F   + M +Y++IW+  DWAT
Sbjct:   29 FDELYRSSWAMDHCV--NEGEVTKLKLDNYSGAGFESRSKYLFGKVSIQIKLVEGDSAGTVTAFYMSSDG---PNHNEFDFEFLGNTTGEPYIVQTNIYVNGVGN--REQRLNLWFDPTTEFHTYSILWSKRSVVFMVDETPIRVQKNLEEKGIPFAKDQAMGVYSSIWNADDWAT 197          
BLAST of FC868845 vs. ExPASy Swiss-Prot
Match: XTH12_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 12 OS=Arabidopsis thaliana GN=XTH12 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.046e-32
Identity = 72/176 (40.91%), Postives = 106/176 (60.23%), Query Frame = 2
Query:  155 FDEGYSHLFGHDNLVVHRDGKSVHLSLDET-GSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFP-AKPMSLYATIWDGSDWAT 676
            F + +   +G     +   G+ +  +LD+T GSGF S   YL G     IKL    +AG V A+Y+S+     +  DEIDFEFLGN+ G+ + I TN++  G  +  RE ++ LWFDP+ DFH Y++LW    IIF +DGIPIR FK   + G  +P ++PM +Y+++W+  DWAT
Sbjct:   27 FYDSFDITWGAGRANIFESGQLLTCTLDKTSGSGFQSKKEYLFGKIDMKIKLVPGNSAGTVTAYYLSSKG---ETWDEIDFEFLGNVTGQPYVIHTNVFTGGKGN--REMQFYLWFDPTADFHTYTVLWNPLNIIFLVDGIPIRVFKNNEANGVAYPKSQPMKIYSSLWEADDWAT 197          
BLAST of FC868845 vs. ExPASy Swiss-Prot
Match: XTH22_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana GN=XTH22 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.591e-32
Identity = 71/161 (44.10%), Postives = 101/161 (62.73%), Query Frame = 2
Query:  200 VHRDGKSVHLSLDET-GSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPA-KPMSLYATIWDGSDWAT 676
            +  +G+ + LSLD++ GSGF S + YL G  S  +KL    +AG V   Y+ +        DEIDFEFLGN  G+ + + TN+Y  G     +E+++ LWFDP+ +FH Y+ILW   +IIF +DG PIREFK   S+G  FP  KPM +Y+++W+  DWAT
Sbjct:   38 IKNNGELLTLSLDKSSGSGFQSKNEYLFGKVSMQMKLVPGNSAGTVTTLYLKSPGT---TWDEIDFEFLGNSSGEPYTLHTNVYTQGKGD--KEQQFKLWFDPTANFHTYTILWNPQRIIFTVDGTPIREFKNMESLGTLFPKNKPMRMYSSLWNADDWAT 193          
BLAST of FC868845 vs. ExPASy Swiss-Prot
Match: XTH24_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 24 OS=Arabidopsis thaliana GN=XTH24 PE=1 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 8.608e-32
Identity = 76/177 (42.94%), Postives = 107/177 (60.45%), Query Frame = 2
Query:  155 FDEGYSHLFGHDNLVVHRDGKSVHLSLDET-GSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYM-SNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPA-KPMSLYATIWDGSDWAT 676
            F+   +  +G+    +  +G+ + LSLD++ GSGF S   YL G     IKL    +AG V  FY+ S G  +    DEIDFEFLGN+ G  + + TN+Y  G     +E++++LWFDP+ +FH YSILW   +II  +D  PIREFK   S+G  FP  KPM +YA++W+  DWAT
Sbjct:   24 FNTDVNVAWGNGRGKILNNGQLLTLSLDKSSGSGFQSKTEYLFGKIDMQIKLVPGNSAGTVTTFYLKSEGSTW----DEIDFEFLGNMSGDPYTLHTNVYTQGKGD--KEQQFHLWFDPTANFHTYSILWNPQRIILTVDDTPIREFKNYESLGVLFPKNKPMRMYASLWNADDWAT 194          
BLAST of FC868845 vs. ExPASy Swiss-Prot
Match: XTH13_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 13 OS=Arabidopsis thaliana GN=XTH13 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.124e-31
Identity = 70/176 (39.77%), Postives = 108/176 (61.36%), Query Frame = 2
Query:  155 FDEGYSHLFGHDNLVVHRDGKSVHLSLDE-TGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFP-AKPMSLYATIWDGSDWAT 676
            F + +   +G+    +   G+ +  +LD+ +GSGF S   YL G     +KL A  +AG V A+Y+S+     +  DEIDFEFLGN+ G+ + + TN++  G  +  RE ++ LWFDP+ DFH Y++LW    IIF +DGIPIR FK   + G  +P ++PM +Y+++W+  DWAT
Sbjct:   26 FYDNFDITWGNGRANIVESGQLLTCTLDKISGSGFQSKKEYLFGKIDMKMKLVAGNSAGTVTAYYLSSKG---ETWDEIDFEFLGNVTGQPYVLHTNVFTGGKGN--REMQFYLWFDPTADFHTYTVLWNPLNIIFLVDGIPIRVFKNNEANGVAYPKSQPMKIYSSLWEADDWAT 196          
BLAST of FC868845 vs. ExPASy Swiss-Prot
Match: XTH14_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 14 OS=Arabidopsis thaliana GN=XTH14 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.120e-30
Identity = 71/176 (40.34%), Postives = 102/176 (57.95%), Query Frame = 2
Query:  155 FDEGYSHLFGHDNLVVHRDGKSVHLSLDE-TGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPA-KPMSLYATIWDGSDWAT 676
            F E +   +G+    +  +G+ +  +LD+ +GSGF S   YL G     +KL A  +AG V A+Y+S+        DEIDFEFLGN  G  + I TN++  G     RE ++ LWFDP+ DFH Y++ W    IIF +DGIPIR FK     G  +P  +PM +Y+++W+  DWAT
Sbjct:   30 FYESFDITWGNGRANIFENGQLLTCTLDKVSGSGFQSKKEYLFGKIDMKLKLVAGNSAGTVTAYYLSSKGTA---WDEIDFEFLGNRTGHPYTIHTNVFTGGKGD--REMQFRLWFDPTADFHTYTVHWNPVNIIFLVDGIPIRVFKNNEKNGVAYPKNQPMRIYSSLWEADDWAT 200          
The following BLAST results are available for this feature:
BLAST of FC868845 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
XTH25_ARATH5.961e-3342.37Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH19_ARATH5.961e-3345.78Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH15_ARATH1.017e-3242.05Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH21_ARATH1.328e-3244.31Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH9_ARATH1.734e-3244.89Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH12_ARATH5.046e-3240.91Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH22_ARATH6.591e-3244.10Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH24_ARATH8.608e-3242.94Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH13_ARATH1.124e-3139.77Putative xyloglucan endotransglucosylase/hydrolase... [more]
XTH14_ARATH2.120e-3040.34Xyloglucan endotransglucosylase/hydrolase protein ... [more]

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Properties
Property NameValue
Genbank descriptionC31005E08EF AbioticL1 Citrus clementina cDNA clone C31005E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868845 ID=FC868845; Name=FC868845; organism=Citrus clementina; type=EST; length=698bp
GCACATATATATATAAACATACACTCACAGAGACAGAGCAAAAACAGAGA
GAGAAGAAAAGATGGTGGTGTCTTATGAGGGTTGTTTTCTTCTAGTATTT
TCTCTTCTTGCTGTGGTTGCTTCTGGGTTGTACAGAAACCTGCCTATTGT
GCCTTTTGATGAAGGGTATAGTCATTTGTTTGGGCATGATAATCTTGTTG
TTCATAGAGATGGAAAATCTGTTCATTTATCTCTAGATGAAACAGGGTCT
GGATTTGTGTCACATGACCTCTATCTTCATGGTTTCTTCAGTGCTTCAAT
AAAGTTGCCTGCTGATTATACTGCCGGCGTTGTTGTTGCCTTCTATATGT
CAAATGGTGACATGTTTGAGAAGAATCATGATGAAATAGACTTTGAGTTC
TTGGGTAATATTAGAGGCAAAAATTGGAGGATTCAGACTAATATTTATGG
CAATGGAAGCACCAGCATTGGAAGAGAAGAGAGATACAATCTCTGGTTTG
ATCCTTCTGATGATTTCCATCAGTACAGTATTCTCTGGACTGATTCCCAG
ATCATATTTTATATAGACGGTATTCCAATTAGGGAGTTTAAGAGAACTGC
ATCTATGGGAGGAGATTTTCCTGCTAAGCCGATGTCTTTGTACGCCACAA
TCTGGGATGGCTCTGATTGGGCTACAATGGTGGNCAATACCGAGTGAA
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