FC868845
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868845 vs. ExPASy Swiss-Prot
Match: XTH26_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 26 OS=Arabidopsis thaliana GN=XTH26 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.385e-28 Identity = 66/176 (37.50%), Postives = 106/176 (60.23%), Query Frame = 2 Query: 155 FDEGYSHLFGHDNLVVHRDGKSVHLSLDET-GSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAKP-MSLYATIWDGSDWAT 676 F + + +G D++ ++ G ++ L LD++ GS S +L G IKL +AG V A+Y+S+ HDEIDFEFLGN G+ + I TN+Y G + RE+++ WF+P++ FH Y+I W S++++++DG PIR F+ S G +P K M ++A++W+ DWAT Sbjct: 29 FSKNFIVTWGKDHMFMN--GTNLRLVLDKSAGSAIKSKVAHLFGSVEMLIKLVPGNSAGTVAAYYLSSTG---STHDEIDFEFLGNATGQPYTIHTNLYAQGKGN--REQQFRPWFNPTNGFHNYTIHWNPSEVVWFVDGTPIRVFRNYESEGIAYPNKQGMKVFASLWNAEDWAT 197
BLAST of FC868845 vs. ExPASy Swiss-Prot
Match: XTH11_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 11 OS=Arabidopsis thaliana GN=XTH11 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.922e-23 Identity = 60/174 (34.48%), Postives = 102/174 (58.62%), Query Frame = 2 Query: 149 VPFDEGYSHLFGHDNLVVHRDGKSVHLSLDE-TGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPA-KPMSLYATIWDGS 664 V + Y +GH LV+++ + + L+LD+ +GSGF S +Y G+F+ IK P + GV+ +FY+ + HDE+ F+ LG G + + TN+Y G G+++R+ LWFDP+ D+H YS LW +Q++FY+D PIR + + + +P+ + M L ++ +GS Sbjct: 22 VTWGNNYYQTWGHQALVINKTSE-LQLTLDKNSGSGFESQLIYGSGYFNVRIKAPQTTSTGVITSFYLISRS---SRHDELCFQILGK-NGPPYLLNTNMYLYGEG--GKDQRFRLWFDPTKDYHSYSFLWNPNQLVFYVDDTPIRVYSKNPDV--YYPSVQTMFLMGSVQNGS 186
BLAST of FC868845 vs. ExPASy Swiss-Prot
Match: CRH1_YEAST (Probable glycosidase CRH1 OS=Saccharomyces cerevisiae GN=CRH1 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.401e-12 Identity = 46/153 (30.07%), Postives = 74/153 (48.37%), Query Frame = 2 Query: 209 DGKSVHLSLDETGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAKPMSLYATIWDGSD 667 DG S+ L+ S+ ++G +K A G+V +FY+ + D+ DEID E++G G N + Q+N + G T+ ++ P+D FH Y++ W + +Y+DG +R T+S G +P PM L IW G D Sbjct: 83 DGLSMTLAKRYDNPSLKSNFYIMYGKLEVILK--AANGTGIVSSFYLQSDDL-----DEIDIEWVG---GDNTQFQSNFFSKGDTTTYDRGEFHGVDTPTDKFHNYTLDWAMDKTTWYLDGESVRVLSNTSSEG--YPQSPMYLMMGIWAGGD 223
BLAST of FC868845 vs. ExPASy Swiss-Prot
Match: GUB_PAEMA (Beta-glucanase OS=Paenibacillus macerans PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 7.576e-12 Identity = 57/172 (33.14%), Postives = 81/172 (47.09%), Query Frame = 2 Query: 188 DNLVVHRDGKSVHLSLDETGSGFVSHD--------LYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAKPMSLYATIWDGS---DW 670 +N+ DGK L L T S + D +Y +G + S+K PA T G+V +F+ G DEID EFLG K +Q N Y NG G E+ +L FD S FH Y+ W I +Y+DG+ K TA+ + P+ P + +W+G+ DW Sbjct: 60 NNVNFTNDGK---LKLGLTSSAYNKFDCAEYRSTNIYGYGLYEVSMK-PAKNT-GIVSSFFTYTGPAHGTQWDEIDIEFLGKDTTK---VQFNYYTNGVG--GHEKVISLGFDASKGFHTYAFDWQPGYIKWYVDGV----LKHTAT--ANIPSTPGKIMMNLWNGTGVDDW 215
BLAST of FC868845 vs. ExPASy Swiss-Prot
Match: GUB_PAEPO (Beta-glucanase OS=Paenibacillus polymyxa GN=gluB PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.688e-11 Identity = 55/165 (33.33%), Postives = 80/165 (48.48%), Query Frame = 2 Query: 188 DNLVVHRDGKSVHLSLDETGSG------FVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAKPMSLYATIWDGS 664 +N+ DGK + LSL + + S + Y +G + S+K PA T G+V +F+ G DEID EFLG K +Q N Y NG G E+ NL FD S FH Y+ W I +Y+DG+ K TA+ + P+ P + +W+G+ Sbjct: 61 NNVNFTNDGK-LKLSLTSPANNKFDCGEYRSTNNYGYGLYEVSMK-PAKNT-GIVSSFFTYTGPSHGTQWDEIDIEFLGKDTTK---VQFNYYTNGVG--GHEKIINLGFDASTSFHTYAFDWQPGYIKWYVDGV----LKHTATT--NIPSTPGKIMMNLWNGT 211
BLAST of FC868845 vs. ExPASy Swiss-Prot
Match: XYND_RUMFL (Xylanase/beta-glucanase OS=Ruminococcus flavefaciens GN=xynD PE=3 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 4.910e-11 Identity = 46/146 (31.51%), Postives = 68/146 (46.58%), Query Frame = 2 Query: 242 TGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAKPMSLYATIWDG---SDW 670 +G F +++ Y +G++ S++ A GVV +F+ G + DEID E LG ++Q N Y NG E+ Y+L FD S+ +H Y W + I +Y+DG RE R D P P + W G DW Sbjct: 635 SGGEFRTNNFYHYGYYECSMQ--AMKNDGVVSSFFTYTGPSDDNPWDEIDIEILGK---NTTQVQFNYYTNGQGK--HEKLYDLGFDSSEAYHTYGFDWQPNYIAWYVDG---REVYRATQ---DIPKTPGKIMMNAWPGLTVDDW 767 The following BLAST results are available for this feature:
BLAST of FC868845 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868845 ID=FC868845; Name=FC868845; organism=Citrus clementina; type=EST; length=698bpback to top |