FC868846

Overview
NameFC868846
Unique NameFC868846
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868846 vs. ExPASy Swiss-Prot
Match: CHS2_RUTGR (Chalcone synthase 2 OS=Ruta graveolens GN=CHS2 PE=2 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 5.317e-82
Identity = 150/206 (72.82%), Postives = 168/206 (81.55%), Query Frame = 3
Query:   81 VTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENKQGSRVLVVCSENTIPTFRGPSYTHID 698
            VT+EEIRKAQRA+G A +LAI TATP N V QADYPDYYF IT SEHMT            SMIRKR+M LTE+ILK NPNMC +M  SLDARQDI +VEVPKLGKEAA KAIKEWGQPKS ITHLIFCT++GVDMPG DYQLT+L+GL P VKR M+YQQGC+AG T+LRLAKDLAEN +G+RVLVVCSE T  TFRGP+ TH+D
Sbjct:    4 VTVEEIRKAQRADGPAAVLAIGTATPANYVTQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIRKRYMYLTEDILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGCDYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPADTHLD 209          
BLAST of FC868846 vs. ExPASy Swiss-Prot
Match: ACS3_RUTGR (Probable acridone synthase 3 OS=Ruta graveolens GN=ACS3 PE=2 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 5.317e-82
Identity = 148/207 (71.50%), Postives = 168/207 (81.16%), Query Frame = 3
Query:   78 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENKQGSRVLVVCSENTIPTFRGPSYTHID 698
            M +++E+RKAQ +EG A ILAI TA P N  +QADYPDYYF +T SEHMT            SMIRKRHMC +EE LKANP +C HMG SL+ARQDI++VE P+LG EAA KAIKEWGQPKS+ITHLIFC+SAGVDMPGADYQLTR++GLNP VKRMMIYQQGCYAG T+LRLAKDLAEN +GSRVLVVCSE T PTFRGPS   +D
Sbjct:    1 MESLKEMRKAQMSEGPAAILAIGTANPDNVYMQADYPDYYFKMTKSEHMTELKDKFRTLCEKSMIRKRHMCFSEEFLKANPEVCKHMGKSLNARQDIAVVETPRLGNEAAVKAIKEWGQPKSSITHLIFCSSAGVDMPGADYQLTRILGLNPSVKRMMIYQQGCYAGGTVLRLAKDLAENNKGSRVLVVCSELTAPTFRGPSPDAVD 207          
BLAST of FC868846 vs. ExPASy Swiss-Prot
Match: CHSB_SOLTU (Chalcone synthase 1B OS=Solanum tuberosum GN=CHS1B PE=2 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 6.944e-82
Identity = 149/207 (71.98%), Postives = 169/207 (81.64%), Query Frame = 3
Query:   78 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENKQGSRVLVVCSENTIPTFRGPSYTHID 698
            MVT+EE RKAQRAEG ATILAI T+TP NCV Q+ YPDYYF ITNSEH T            SMI+KR+M LTEEILK NPNMC +M  SLDARQDI +VEVPKLGKEAA KAIKEWGQPKS ITHL+FCT++GVDMPG DYQL +L+GL P VKR+M+YQQGC+AG T+LRLAKDLAEN +G+RVLVVCSE T  TFRGPS +H+D
Sbjct:    1 MVTVEEYRKAQRAEGPATILAIGTSTPSNCVDQSTYPDYYFRITNSEHKTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGCDYQLAKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSESHLD 207          
BLAST of FC868846 vs. ExPASy Swiss-Prot
Match: CHS2_SOLTU (Chalcone synthase 2 OS=Solanum tuberosum GN=CHS2 PE=2 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 6.944e-82
Identity = 148/207 (71.50%), Postives = 171/207 (82.61%), Query Frame = 3
Query:   78 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENKQGSRVLVVCSENTIPTFRGPSYTHID 698
            MVT+EE+RKAQRA+G ATI+AI TATP NCV Q+ YPDYYF ITNSEHMT            SMI KR+M LTEEILK NPN+C +M  SLDARQDI +VEVPKLGKEAA KAIKEWGQPKS ITH++FCT++GVDMPGADYQLT+L+GL P VKR+M+YQQGC+AG T++RLAKDLAEN +G+RVLVVCSE T  TF GPS TH+D
Sbjct:    1 MVTVEEVRKAQRAKGPATIMAIGTATPSNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMINKRYMHLTEEILKENPNICEYMAPSLDARQDIVVVEVPKLGKEAAQKAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVIRLAKDLAENNKGARVLVVCSEITAVTFSGPSDTHLD 207          
BLAST of FC868846 vs. ExPASy Swiss-Prot
Match: CHS2_IPOBA (Chalcone synthase LF2 OS=Ipomoea batatas GN=CHS-LF2 PE=2 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 6.944e-82
Identity = 147/207 (71.01%), Postives = 171/207 (82.61%), Query Frame = 3
Query:   78 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENKQGSRVLVVCSENTIPTFRGPSYTHID 698
            MVT+EE+RKAQRAEG ATILAI T TP NCV Q+ YPDYYF ITNSEH T            SMI KR+M LTEEILK NP+ C +M  SLDARQDI++VEVPKLGKEAA  AIKEWGQPKS ITH++FCT++GVDMPGADYQLT+L+GL+P VKR+M+YQQGC+AG T+LRLAKDLAEN +G+RVL+VCSE T+ TFRGPS TH+D
Sbjct:    1 MVTVEEVRKAQRAEGPATILAIGTVTPANCVNQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMITKRYMHLTEEILKENPSFCEYMAPSLDARQDIAVVEVPKLGKEAAQSAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLSPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLIVCSEITVVTFRGPSETHLD 207          
BLAST of FC868846 vs. ExPASy Swiss-Prot
Match: CHS4_IPOBA (Chalcone synthase LF4 OS=Ipomoea batatas GN=CHS-LF4 PE=2 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 9.069e-82
Identity = 147/207 (71.01%), Postives = 170/207 (82.13%), Query Frame = 3
Query:   78 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENKQGSRVLVVCSENTIPTFRGPSYTHID 698
            MVT+EE+RKAQRAEG ATILAI T TP NCV Q+ YPDYYF ITNSEH T            SMI KR+M LTEEILK NP+ C +M  SLDARQDI++VEVPKLGKEAA  AIKEWGQPKS ITH++FCT++GVDMPGADYQLT+L+GL P VKR+M+YQQGC+AG T+LRLAKDLAEN +G+RVL+VCSE T+ TFRGPS TH+D
Sbjct:    1 MVTVEEVRKAQRAEGPATILAIGTVTPANCVNQSTYPDYYFRITNSEHKTELKERFQRMCDKSMITKRYMHLTEEILKENPSFCEYMAPSLDARQDIAVVEVPKLGKEAAQSAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLIVCSEITVVTFRGPSETHLD 207          
BLAST of FC868846 vs. ExPASy Swiss-Prot
Match: CHSJ_PETHY (Chalcone synthase J OS=Petunia hybrida GN=CHSJ PE=2 SV=2)

HSP 1 Score: 302.753 bits (774), Expect = 1.185e-81
Identity = 149/207 (71.98%), Postives = 171/207 (82.61%), Query Frame = 3
Query:   78 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENKQGSRVLVVCSENTIPTFRGPSYTHID 698
            MVT+EEIR+AQRAEG ATI+AI TATP NCV Q+ YPDYYF ITNSEH T            SMI+KR+M LTEEILK NPN+C +M  SLDARQDI +VEVPKLGKEAA KAIKEWGQPKS ITHL+FCT++GVDMPGADYQLT+L+GL   VKR+M+YQQGC+AG T+LRLAKDLAEN +G+RVLVVCSE T  TFRGP+ TH+D
Sbjct:    1 MVTVEEIRRAQRAEGPATIMAIGTATPSNCVDQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMIKKRYMHLTEEILKENPNICEYMAPSLDARQDIVVVEVPKLGKEAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPNDTHLD 207          
BLAST of FC868846 vs. ExPASy Swiss-Prot
Match: CHSA_PETHY (Chalcone synthase A OS=Petunia hybrida GN=CHSA PE=2 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.185e-81
Identity = 148/207 (71.50%), Postives = 170/207 (82.13%), Query Frame = 3
Query:   78 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENKQGSRVLVVCSENTIPTFRGPSYTHID 698
            MVT+EE RKAQRAEG AT++AI TATP NCV Q+ YPDYYF ITNSEH T            SMI+KR+M LTEEILK NP+MC +M  SLDARQDI +VEVPKLGKEAA KAIKEWGQPKS ITHL+FCT++GVDMPG DYQLT+L+GL P VKR+M+YQQGC+AG T+LRLAKDLAEN +G+RVLVVCSE T  TFRGP+ TH+D
Sbjct:    1 MVTVEEYRKAQRAEGPATVMAIGTATPTNCVDQSTYPDYYFRITNSEHKTDLKEKFKRMCEKSMIKKRYMHLTEEILKENPSMCEYMAPSLDARQDIVVVEVPKLGKEAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGCDYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPNDTHLD 207          
BLAST of FC868846 vs. ExPASy Swiss-Prot
Match: CHS8_IPOBA (Chalcone synthase DIV OS=Ipomoea batatas GN=CHS-DIV PE=2 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.185e-81
Identity = 146/207 (70.53%), Postives = 170/207 (82.13%), Query Frame = 3
Query:   78 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENKQGSRVLVVCSENTIPTFRGPSYTHID 698
            MVT+EE+RKAQRAEG ATILAI T TP NCV Q+ YPDYYF ITNSEH T            SMI KR+M LTEEILK NP+ C +M  SLDARQDI++VEVPKLGKEAA  AIKEWGQPKS ITH++FCT++G+DMPGADYQLT+L+GL P VKR+M+YQQGC+AG T+LRLAKDLAEN +G+RVL+VCSE T+ TFRGPS TH+D
Sbjct:    1 MVTVEEVRKAQRAEGPATILAIGTVTPANCVNQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMITKRYMHLTEEILKENPSFCEYMAPSLDARQDIAVVEVPKLGKEAAQSAIKEWGQPKSKITHVVFCTTSGIDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLIVCSEITVVTFRGPSETHLD 207          
BLAST of FC868846 vs. ExPASy Swiss-Prot
Match: CHS1_IPOBA (Chalcone synthase LF1 OS=Ipomoea batatas GN=CHS-LF1 PE=2 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.185e-81
Identity = 146/207 (70.53%), Postives = 170/207 (82.13%), Query Frame = 3
Query:   78 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENKQGSRVLVVCSENTIPTFRGPSYTHID 698
            MVT+EE+RKAQRAEG ATILAI T TP NCV Q+ YPDYYF ITNSEH T            SMI KR+M LTEEILK NP+ C +M  SLDARQDI++VEVPKLGKEAA  AIKEWGQPKS ITH++FCT++G+DMPGADYQLT+L+GL P VKR+M+YQQGC+AG T+LRLAKDLAEN +G+RVL+VCSE T+ TFRGPS TH+D
Sbjct:    1 MVTVEEVRKAQRAEGPATILAIGTVTPANCVNQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMITKRYMHLTEEILKENPSFCEYMAPSLDARQDIAVVEVPKLGKEAAQSAIKEWGQPKSKITHVVFCTTSGIDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLIVCSEITVVTFRGPSETHLD 207          
The following BLAST results are available for this feature:
BLAST of FC868846 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CHS2_RUTGR5.317e-8272.82Chalcone synthase 2 OS=Ruta graveolens GN=CHS2 PE=... [more]
ACS3_RUTGR5.317e-8271.50Probable acridone synthase 3 OS=Ruta graveolens GN... [more]
CHSB_SOLTU6.944e-8271.98Chalcone synthase 1B OS=Solanum tuberosum GN=CHS1B... [more]
CHS2_SOLTU6.944e-8271.50Chalcone synthase 2 OS=Solanum tuberosum GN=CHS2 P... [more]
CHS2_IPOBA6.944e-8271.01Chalcone synthase LF2 OS=Ipomoea batatas GN=CHS-LF... [more]
CHS4_IPOBA9.069e-8271.01Chalcone synthase LF4 OS=Ipomoea batatas GN=CHS-LF... [more]
CHSJ_PETHY1.185e-8171.98Chalcone synthase J OS=Petunia hybrida GN=CHSJ PE=... [more]
CHSA_PETHY1.185e-8171.50Chalcone synthase A OS=Petunia hybrida GN=CHSA PE=... [more]
CHS8_IPOBA1.185e-8170.53Chalcone synthase DIV OS=Ipomoea batatas GN=CHS-DI... [more]
CHS1_IPOBA1.185e-8170.53Chalcone synthase LF1 OS=Ipomoea batatas GN=CHS-LF... [more]

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Properties
Property NameValue
Genbank descriptionC31005E09EF AbioticL1 Citrus clementina cDNA clone C31005E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868846 ID=FC868846; Name=FC868846; organism=Citrus clementina; type=EST; length=700bp
AGACACAATCGCGAAAGCGCATACTTATTAATTAACTAAGTTTAAGTACT
GTTTTGGAAGCAATCTGACGATCAGAGATGGTAACAATGGAGGAGATTAG
AAAGGCTCAGCGAGCCGAGGGCCTGGCGACCATCCTCGCCATCAGCACGG
CAACGCCGCCCAATTGTGTCATCCAAGCTGATTATCCTGACTATTACTTC
GGGATCACCAACAGCGAGCACATGACTGAGCTCAAAGAGAAGTTCAAGCT
CTTGTGTGAGAAGTCGATGATAAGAAAGCGTCACATGTGCTTAACAGAAG
AGATTTTAAAAGCAAACCCTAATATGTGCTTACACATGGGGACATCACTC
GATGCGCGCCAGGACATTTCTCTTGTTGAAGTACCAAAGCTTGGCAAAGA
GGCGGCAACCAAAGCTATCAAAGAATGGGGACAGCCCAAATCCAATATCA
CCCATCTCATTTTCTGCACATCTGCAGGCGTCGACATGCCTGGCGCTGAC
TATCAGCTCACAAGACTCATCGGCCTCAACCCGGATGTTAAGCGTATGAT
GATATATCAACAAGGGTGTTATGCTGGCGCCACCATCCTTCGTCTTGCTA
AAGATTTGGCTGAAAACAAACAGGGCTCTCGTGTTCTTGTTGTTTGTTCT
GAGAACACAATCCCCACTTTCCGTGGGCCGTCTTATACCCATATTGATTC
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