FC868846

Overview
NameFC868846
Unique NameFC868846
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9408 contig Ccv1_Contig9408:1..700. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868846 vs. ExPASy Swiss-Prot
Match: CHSE_IPONI (Chalcone synthase E OS=Ipomoea nil GN=CHSE PE=2 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 1.547e-81
Identity = 146/207 (70.53%), Postives = 170/207 (82.13%), Query Frame = 3
Query:   78 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENKQGSRVLVVCSENTIPTFRGPSYTHID 698
            MVT+EE+RKAQRA+G ATI+AI T+TP NCV Q+ YPDYYF ITNSEH+             SMI+KR+M LTEEILK NPN+C +M  SLDARQDI +VEVPKLGKEAA KAIKEWGQPKS ITHL+FCT++GVDMPGADYQLT+L+GL P VKR M+YQQGC+AG T++RLAKDLAEN +G+RVLVVCSE T  TFRGPS  H+D
Sbjct:    1 MVTVEEVRKAQRAQGPATIMAIGTSTPQNCVDQSTYPDYYFRITNSEHLVELKEKFKRMCEKSMIKKRYMYLTEEILKENPNICAYMAPSLDARQDIVVVEVPKLGKEAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLQPSVKRFMMYQQGCFAGGTVIRLAKDLAENNKGARVLVVCSEITAVTFRGPSDAHLD 207          
BLAST of FC868846 vs. ExPASy Swiss-Prot
Match: CHSA_SOLTU (Chalcone synthase 1A OS=Solanum tuberosum GN=CHS1A PE=2 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 2.020e-81
Identity = 148/207 (71.50%), Postives = 168/207 (81.16%), Query Frame = 3
Query:   78 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENKQGSRVLVVCSENTIPTFRGPSYTHID 698
            MVT+EE RKAQRAEG ATILAI T+TP NCV Q+ YPDYYF ITNSEH T            SMI+KR+M LTEEILK NPNMC +M  SLDARQDI +VEVPKLGKEAA KAIKEWGQPKS ITHL+FCT++GVDMPG DYQL +L+GL P VKR+M+YQQGC+ G T+LRLAKDLAEN +G+RVLVVCSE T  TFRGPS +H+D
Sbjct:    1 MVTVEEYRKAQRAEGPATILAIGTSTPSNCVDQSTYPDYYFRITNSEHKTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGCDYQLAKLLGLRPSVKRLMMYQQGCFVGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSESHLD 207          
BLAST of FC868846 vs. ExPASy Swiss-Prot
Match: CHS7_IPOBA (Chalcone synthase DIII OS=Ipomoea batatas GN=CHS-DIII PE=2 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 2.020e-81
Identity = 147/207 (71.01%), Postives = 170/207 (82.13%), Query Frame = 3
Query:   78 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENKQGSRVLVVCSENTIPTFRGPSYTHID 698
            MVT+EE+RKA+RAEG ATILAI TATP NCV Q+ YPDYYF ITNSEH T            SMI KR+M LTEEILK NP+ C +M  SLDARQDI++VEVPKLGKEAA  AIKEWGQPKS ITH+ FCT++GVDMPGADYQLT+L+GL P VKR+M+YQQGC+AG T+LRLAKDLAEN +G+RVL+VCSE T+ TFRGPS TH+D
Sbjct:    1 MVTVEEVRKAKRAEGPATILAIGTATPANCVNQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMITKRYMHLTEEILKENPSFCEYMAPSLDARQDIAVVEVPKLGKEAAQSAIKEWGQPKSKITHVFFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLIVCSEITVVTFRGPSETHLD 207          
BLAST of FC868846 vs. ExPASy Swiss-Prot
Match: CHSY_HYDMC (Chalcone synthase OS=Hydrangea macrophylla GN=CHS PE=2 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 2.639e-81
Identity = 146/207 (70.53%), Postives = 171/207 (82.61%), Query Frame = 3
Query:   78 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENKQGSRVLVVCSENTIPTFRGPSYTHID 698
            MVT+EE+RKAQRAEG ATILAI TATPPN V Q+ YPD+YF +TNSEH              S I+KR+M LTEEILK NPN+C +M  SLDARQD+ +VE+PKLGKEAAT+AIKEWGQPKS ITHL+FCT++GVDMPGADYQLT+L+GL P VKR+M+YQQGC+AG T+LRLAKDLAEN +G+RVLVVCSE T  TFRGPS TH+D
Sbjct:    1 MVTVEEVRKAQRAEGPATILAIGTATPPNYVDQSTYPDFYFRVTNSEHKKELKAKFQRMCDNSQIKKRYMHLTEEILKENPNICAYMAPSLDARQDMVVVEIPKLGKEAATRAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLD 207          
BLAST of FC868846 vs. ExPASy Swiss-Prot
Match: CHSY_CARAN (Chalcone synthase OS=Cardamine amara GN=CHS PE=3 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 2.639e-81
Identity = 148/205 (72.20%), Postives = 168/205 (81.95%), Query Frame = 3
Query:   84 TMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENKQGSRVLVVCSENTIPTFRGPSYTHID 698
            +++EIRKAQRA+G A ILAI TA P N VIQA+YPDYYF ITNSEHMT            S IRKRHM +TEE LK NPNMC +M  SLDARQDI +VEVPKLGKEAA KAIKEWGQPKS ITHL+FCT++GVDMPGADYQLT+L+GL P VKR+M+YQQGC+AG T+LRLAKDLAEN +G+RVLVVCSE T  TFRGPS TH+D
Sbjct:    8 SLDEIRKAQRADGPAGILAIGTANPANYVIQAEYPDYYFRITNSEHMTDLKEKFKRMCDKSTIRKRHMHVTEEFLKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLD 212          
BLAST of FC868846 vs. ExPASy Swiss-Prot
Match: CHS1_RUTGR (Chalcone synthase 1 OS=Ruta graveolens GN=CHS1 PE=2 SV=1)

HSP 1 Score: 301.212 bits (770), Expect = 3.446e-81
Identity = 149/206 (72.33%), Postives = 167/206 (81.07%), Query Frame = 3
Query:   81 VTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENKQGSRVLVVCSENTIPTFRGPSYTHID 698
            VT+E IRKAQRA+G A +LAI TATP N V QADYPDYYF IT SEHMT            SMIRKR+M LTE+ILK NPNMC +M  SLDARQDI +VEVPKLGKEAA KAIKEWGQPKS ITHLIFCT++GVDMPG DYQLT+L+GL P VKR M+YQQGC+AG T+LRLAKDLAEN +G+RVLVVCSE T  TFRGP+ TH+D
Sbjct:    4 VTVEAIRKAQRADGPAAVLAIGTATPANYVTQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIRKRYMHLTEDILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGCDYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPADTHLD 209          
BLAST of FC868846 vs. ExPASy Swiss-Prot
Match: ACS4_RUTGR (Probable acridone synthase 4 OS=Ruta graveolens GN=ACS4 PE=2 SV=1)

HSP 1 Score: 301.212 bits (770), Expect = 3.446e-81
Identity = 147/207 (71.01%), Postives = 168/207 (81.16%), Query Frame = 3
Query:   78 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENKQGSRVLVVCSENTIPTFRGPSYTHID 698
            M +++E+RKAQ +EG A ILAI TATP N  +QADYPDYYF +T SEHMT            SMIRKRHMC +EE LKANP +  HMG SL+ARQDI++VE P+LG EAA KAIKEWGQPKS+ITHLIFC+SAGVDMPGADYQLTR++GLNP VKRMM+YQQGCYAG T+LRLAKDLAEN +GSRVLVVCSE T PTFRGPS   +D
Sbjct:    1 MESLKEMRKAQMSEGPAAILAIGTATPNNVYMQADYPDYYFRMTKSEHMTELKDKFRTLCEKSMIRKRHMCFSEEFLKANPEVSKHMGKSLNARQDIAVVETPRLGNEAAVKAIKEWGQPKSSITHLIFCSSAGVDMPGADYQLTRILGLNPSVKRMMVYQQGCYAGGTVLRLAKDLAENNKGSRVLVVCSELTAPTFRGPSPDAVD 207          
BLAST of FC868846 vs. ExPASy Swiss-Prot
Match: CHSY_MATIN (Chalcone synthase OS=Matthiola incana GN=CHS PE=2 SV=1)

HSP 1 Score: 300.827 bits (769), Expect = 4.501e-81
Identity = 147/205 (71.71%), Postives = 168/205 (81.95%), Query Frame = 3
Query:   84 TMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENKQGSRVLVVCSENTIPTFRGPSYTHID 698
            +++EIRKAQRA+G A IL I TA P N VIQA+YPDYYF ITNSEHMT            SMIRKRHM LTE+ LK NPNMC +M  SLDARQDI +VEVPKLGKEAA +AIKEWGQPKS ITHL+FCT++GVDMPGADYQLT+L+GL P VKR+M+YQQGC+AG T+LRLAKDLAEN +G+RVLVVCSE T  TFRGPS TH+D
Sbjct:    7 SLDEIRKAQRADGPAGILGIGTANPANHVIQAEYPDYYFRITNSEHMTDLKEKFQRMCDKSMIRKRHMHLTEDFLKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVRAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLD 211          
BLAST of FC868846 vs. ExPASy Swiss-Prot
Match: CHSD_IPONI (Chalcone synthase D OS=Ipomoea nil GN=CHSD PE=2 SV=1)

HSP 1 Score: 300.827 bits (769), Expect = 4.501e-81
Identity = 147/207 (71.01%), Postives = 170/207 (82.13%), Query Frame = 3
Query:   78 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENKQGSRVLVVCSENTIPTFRGPSYTHID 698
            MVT+EE+RKAQRAEG ATILAI TATP NCV Q+ YPDYYF ITNS+HMT            SMI KR+M LTEEILK NP+ C +M  SLDARQDI +VEVPKLGKEAA  AIKEWGQPKS ITH+IFCT++GVDMPGADYQLT+L+GL P VKR+M+YQQGC+AG T+LR+AKDLAEN + +RVLVVCSE T+ TFRGP+ TH+D
Sbjct:    1 MVTVEEVRKAQRAEGPATILAIGTATPANCVDQSTYPDYYFRITNSDHMTDLKQKFQRMCDKSMITKRYMHLTEEILKENPSFCEYMAPSLDARQDIVVVEVPKLGKEAAQSAIKEWGQPKSKITHVIFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRVAKDLAENNKAARVLVVCSEITVVTFRGPNETHLD 207          
BLAST of FC868846 vs. ExPASy Swiss-Prot
Match: CHS3_SINAL (Chalcone synthase 3 OS=Sinapis alba GN=CHS3 PE=2 SV=1)

HSP 1 Score: 300.827 bits (769), Expect = 4.501e-81
Identity = 148/205 (72.20%), Postives = 168/205 (81.95%), Query Frame = 3
Query:   84 TMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENKQGSRVLVVCSENTIPTFRGPSYTHID 698
            +++EIRKAQRA+G A ILAI TA P N VIQA+YPDYYF ITNSEHMT            S IRKRHM LTEE LK NPNMC +M  SLDARQDI +VEVPKLGKEAA KAIKEWGQPKS ITH++FCT++GVDMPGADYQLT+L+GL P VKR+M+YQQGC+AG T+LRLAKDLAEN +G+RVLVVCSE T  TFRGPS TH+D
Sbjct:    8 SLDEIRKAQRADGPAGILAIGTANPANHVIQAEYPDYYFRITNSEHMTDLKEKFKRMCDKSTIRKRHMHLTEEFLKDNPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLD 212          
The following BLAST results are available for this feature:
BLAST of FC868846 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CHSE_IPONI1.547e-8170.53Chalcone synthase E OS=Ipomoea nil GN=CHSE PE=2 SV... [more]
CHSA_SOLTU2.020e-8171.50Chalcone synthase 1A OS=Solanum tuberosum GN=CHS1A... [more]
CHS7_IPOBA2.020e-8171.01Chalcone synthase DIII OS=Ipomoea batatas GN=CHS-D... [more]
CHSY_HYDMC2.639e-8170.53Chalcone synthase OS=Hydrangea macrophylla GN=CHS ... [more]
CHSY_CARAN2.639e-8172.20Chalcone synthase OS=Cardamine amara GN=CHS PE=3 S... [more]
CHS1_RUTGR3.446e-8172.33Chalcone synthase 1 OS=Ruta graveolens GN=CHS1 PE=... [more]
ACS4_RUTGR3.446e-8171.01Probable acridone synthase 4 OS=Ruta graveolens GN... [more]
CHSY_MATIN4.501e-8171.71Chalcone synthase OS=Matthiola incana GN=CHS PE=2 ... [more]
CHSD_IPONI4.501e-8171.01Chalcone synthase D OS=Ipomoea nil GN=CHSD PE=2 SV... [more]
CHS3_SINAL4.501e-8172.20Chalcone synthase 3 OS=Sinapis alba GN=CHS3 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionC31005E09EF AbioticL1 Citrus clementina cDNA clone C31005E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868846 ID=FC868846; Name=FC868846; organism=Citrus clementina; type=EST; length=700bp
AGACACAATCGCGAAAGCGCATACTTATTAATTAACTAAGTTTAAGTACT
GTTTTGGAAGCAATCTGACGATCAGAGATGGTAACAATGGAGGAGATTAG
AAAGGCTCAGCGAGCCGAGGGCCTGGCGACCATCCTCGCCATCAGCACGG
CAACGCCGCCCAATTGTGTCATCCAAGCTGATTATCCTGACTATTACTTC
GGGATCACCAACAGCGAGCACATGACTGAGCTCAAAGAGAAGTTCAAGCT
CTTGTGTGAGAAGTCGATGATAAGAAAGCGTCACATGTGCTTAACAGAAG
AGATTTTAAAAGCAAACCCTAATATGTGCTTACACATGGGGACATCACTC
GATGCGCGCCAGGACATTTCTCTTGTTGAAGTACCAAAGCTTGGCAAAGA
GGCGGCAACCAAAGCTATCAAAGAATGGGGACAGCCCAAATCCAATATCA
CCCATCTCATTTTCTGCACATCTGCAGGCGTCGACATGCCTGGCGCTGAC
TATCAGCTCACAAGACTCATCGGCCTCAACCCGGATGTTAAGCGTATGAT
GATATATCAACAAGGGTGTTATGCTGGCGCCACCATCCTTCGTCTTGCTA
AAGATTTGGCTGAAAACAAACAGGGCTCTCGTGTTCTTGTTGTTTGTTCT
GAGAACACAATCCCCACTTTCCGTGGGCCGTCTTATACCCATATTGATTC
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