FC868846

Overview
NameFC868846
Unique NameFC868846
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868846 vs. ExPASy Swiss-Prot
Match: CHS8_BROFI (Chalcone synthase 8 OS=Bromheadia finlaysoniana GN=CHS8 PE=2 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 1.601e-78
Identity = 142/204 (69.61%), Postives = 162/204 (79.41%), Query Frame = 3
Query:   87 MEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENKQGSRVLVVCSENTIPTFRGPSYTHID 698
            MEEIR+AQRAEG A +LAI T+TPPN + QADYPDYYF IT SEH+T            SMI+KR+M LTEEILK NPN+C  M  SLDARQDI + EVPKL KEAA +AIKEWG PKS ITHLIFCT++G+DMPGADYQLTRL+GL P V R M+YQQGC+AG T+LRLAKDLAEN  G+RVLVVCSE T  TFRGPS +H+D
Sbjct:    5 MEEIRQAQRAEGPAAVLAIGTSTPPNALYQADYPDYYFRITKSEHLTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNICAFMAPSLDARQDIVVTEVPKLAKEAAARAIKEWGHPKSRITHLIFCTTSGIDMPGADYQLTRLLGLRPSVNRFMLYQQGCFAGGTVLRLAKDLAENNAGARVLVVCSEITAVTFRGPSESHLD 208          
BLAST of FC868846 vs. ExPASy Swiss-Prot
Match: CHS4_PEA (Chalcone synthase 4 OS=Pisum sativum GN=CHS4 PE=3 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 1.601e-78
Identity = 145/207 (70.05%), Postives = 167/207 (80.68%), Query Frame = 3
Query:   78 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENKQGSRVLVVCSENTIPTFRGPSYTHID 698
            MV++ EIRKAQRAEG ATILAI TA P NCV Q+ YPD+YF ITNSEH              SMI +R+M LTEEILK NP++C +M  SLDARQD+ +VEVP+LGKEAA KAIKEWGQPKS ITHLIFCT++GVDMPGADYQLT+L+GL P VKR M+YQQGC+AG T+LRLAKDLAEN +G+RVLVVCSE T  TFRGPS TH+D
Sbjct:    1 MVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFRITNSEHKIELKQKFQRMCDKSMINRRYMYLTEEILKENPSVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLD 207          
BLAST of FC868846 vs. ExPASy Swiss-Prot
Match: CHS4_BROFI (Chalcone synthase 4 OS=Bromheadia finlaysoniana GN=CHS4 PE=2 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 1.601e-78
Identity = 142/204 (69.61%), Postives = 162/204 (79.41%), Query Frame = 3
Query:   87 MEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENKQGSRVLVVCSENTIPTFRGPSYTHID 698
            MEEIR+AQRAEG A +LAI T+TPPN + QADYPDYYF IT SEH+T            SMI+KR+M LTEEILK NPN+C  M  SLDARQDI + EVPKL KEAA +AIKEWG PKS ITHLIFCT++G+DMPGADYQLTRL+GL P V R M+YQQGC+AG T+LRLAKDLAEN  G+RVLVVCSE T  TFRGPS +H+D
Sbjct:    5 MEEIRQAQRAEGPAAVLAIGTSTPPNALYQADYPDYYFRITKSEHLTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNICAFMAPSLDARQDIVVTEVPKLAKEAAVRAIKEWGHPKSRITHLIFCTTSGIDMPGADYQLTRLLGLRPSVNRFMLYQQGCFAGGTVLRLAKDLAENNAGARVLVVCSEITAVTFRGPSESHLD 208          
BLAST of FC868846 vs. ExPASy Swiss-Prot
Match: CHS3_BROFI (Chalcone synthase 3 OS=Bromheadia finlaysoniana GN=CHS3 PE=2 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 1.601e-78
Identity = 142/204 (69.61%), Postives = 162/204 (79.41%), Query Frame = 3
Query:   87 MEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENKQGSRVLVVCSENTIPTFRGPSYTHID 698
            MEEIR+AQRAEG A +LAI T+TPPN + QADYPDYYF IT SEH+T            SMI+KR+M LTEEILK NPN+C  M  SLDARQDI + EVPKL KEAA +AIKEWG PKS ITHLIFCT++G+DMPGADYQLTRL+GL P V R M+YQQGC+AG T+LRLAKDLAEN  G+RVLVVCSE T  TFRGPS +H+D
Sbjct:    5 MEEIRQAQRAEGPAAVLAIGTSTPPNALYQADYPDYYFRITKSEHLTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNICAFMAPSLDARQDIVVTEVPKLAKEAAVRAIKEWGHPKSRITHLIFCTTSGIDMPGADYQLTRLLGLRPSVNRFMLYQQGCFAGGTVLRLAKDLAENNAGARVLVVCSEITAVTFRGPSESHLD 208          
BLAST of FC868846 vs. ExPASy Swiss-Prot
Match: CHS2_PEA (Chalcone synthase 2 OS=Pisum sativum GN=CHS2 PE=2 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 1.601e-78
Identity = 144/207 (69.57%), Postives = 167/207 (80.68%), Query Frame = 3
Query:   78 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENKQGSRVLVVCSENTIPTFRGPSYTHID 698
            MVT+ EIRKAQRAEG ATILAI TA P NCV Q+ YPD+YF ITNSEH T            SMI++R+M LTE+ILK NP++C +M  SLDARQD+ +VEVP+LGKEAA KAIKEWGQPKS ITHLIFCT++GVDMPGADYQLT+L+GL P VKR M+YQQGC+AG T+ RLAKDLAEN + +RVLVVCSE T  TFRGPS TH+D
Sbjct:    1 MVTVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTVLKEKFQRMCDKSMIKRRYMYLTEDILKENPSLCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVFRLAKDLAENNKNARVLVVCSEVTAVTFRGPSDTHLD 207          
BLAST of FC868846 vs. ExPASy Swiss-Prot
Match: CHS1_TRISU (Chalcone synthase 1 OS=Trifolium subterraneum GN=CHS1 PE=3 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 2.091e-78
Identity = 146/207 (70.53%), Postives = 167/207 (80.68%), Query Frame = 3
Query:   78 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENKQGSRVLVVCSENTIPTFRGPSYTHID 698
            MV++ EIRKAQRAEG ATILAI TA PPN V QA YPD+YF ITNSEH              SMI+ R+M LTEEILK NP++C +M  SLDARQD+ +VEVP+LGKEAA KAIKEWGQPKS ITHLIFCT++GVDMPGADYQLT+L+GL P VKR M+YQQGC+AG T+LRLAKDLAEN +G+RVLVVCSE T  TFRGPS TH+D
Sbjct:    1 MVSVAEIRKAQRAEGPATILAIGTANPPNRVEQATYPDFYFKITNSEHKVELKEKFQRMCDKSMIKSRYMYLTEEILKENPSVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLD 207          
BLAST of FC868846 vs. ExPASy Swiss-Prot
Match: CHS1_SOLLC (Chalcone synthase 1 OS=Solanum lycopersicum GN=CHS1 PE=2 SV=2)

HSP 1 Score: 291.967 bits (746), Expect = 2.091e-78
Identity = 143/207 (69.08%), Postives = 164/207 (79.23%), Query Frame = 3
Query:   78 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENKQGSRVLVVCSENTIPTFRGPSYTHID 698
            MVT+EE RKAQRAEG ATILAI T+TP NCV Q+ YPDYYF ITNSEH T            SMI+KR+M LTEEILK NPNMC +M  SLDARQDI +VEVPKLGK    KAIKEWGQPKS ITHL+FCT++GVDMP  DYQL +L+ + P VKR+M+YQQGC+AG T+LRLAKDLAEN +G+RVLVVCSE T  TFRGPS +H+D
Sbjct:    1 MVTVEEYRKAQRAEGPATILAIGTSTPSNCVDQSTYPDYYFRITNSEHKTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKRGTQKAIKEWGQPKSKITHLVFCTTSGVDMPACDYQLAKLLPVRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSESHLD 207          
BLAST of FC868846 vs. ExPASy Swiss-Prot
Match: CHSY_PINST (Chalcone synthase OS=Pinus strobus GN=CHS PE=2 SV=1)

HSP 1 Score: 291.582 bits (745), Expect = 2.731e-78
Identity = 142/207 (68.60%), Postives = 167/207 (80.68%), Query Frame = 3
Query:   78 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENKQGSRVLVVCSENTIPTFRGPSYTHID 698
            M  +E  RKAQRA+G ATILAI TATPPN V Q+ YPDYYF ITNSEHMT            S I+KR+M LTEEIL  NP++C +M  SLDARQD+ +VEVP+LGKEAA KAIKEWGQPKS ITH+IFCT++GVDMPGADYQ+T+L+GL P VKR+M+YQQGC+AG T+LR+AKDLAEN +G+RVLVVCSE T  TFRGPS TH+D
Sbjct:    6 MADLEAFRKAQRADGPATILAIGTATPPNAVDQSTYPDYYFKITNSEHMTELKEKFRRMCDKSGIKKRYMYLTEEILNENPSVCAYMAPSLDARQDMVVVEVPRLGKEAAAKAIKEWGQPKSKITHVIFCTTSGVDMPGADYQMTKLLGLRPSVKRVMMYQQGCFAGGTVLRVAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLD 212          
BLAST of FC868846 vs. ExPASy Swiss-Prot
Match: CHS9_MEDSA (Chalcone synthase 9 OS=Medicago sativa GN=CHS9 PE=2 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 3.566e-78
Identity = 143/207 (69.08%), Postives = 168/207 (81.16%), Query Frame = 3
Query:   78 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENKQGSRVLVVCSENTIPTFRGPSYTHID 698
            MV++ EIR+AQRAEG ATI+AI TA P NCV Q+ YPD+YF ITNSEH              SMI++R+M LTEEILK NP++C +M  SLDARQD+ +VEVP+LGKEAA KAIKEWGQPKS ITHLIFCT++GVDMPGADYQLT+L+GL P VKR M+YQQGC+AG T+LRLAKDLAEN +G+RVLVVCSE T  TFRGPS TH+D
Sbjct:    1 MVSVSEIRQAQRAEGPATIMAIGTANPANCVEQSTYPDFYFKITNSEHKVELKEKFQRMCDKSMIKRRYMYLTEEILKENPSVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLD 207          
BLAST of FC868846 vs. ExPASy Swiss-Prot
Match: CHS6_TRISU (Chalcone synthase 6 OS=Trifolium subterraneum GN=CHS6 PE=2 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 3.566e-78
Identity = 146/207 (70.53%), Postives = 167/207 (80.68%), Query Frame = 3
Query:   78 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENKQGSRVLVVCSENTIPTFRGPSYTHID 698
            MV++ EIRKAQRAEG ATILAI TA P N V QA YPD+YF ITNSEH T            SMI+ R+M LTEEILK NP++C +M  SLDARQD+ +VEVP+LGKEAA KAIKEWGQPKS ITHLIFCT++GVDMPGADYQLT+L+GL P VKR M+YQQGC+AG T+LRLAKDLAEN +G+RVLVVCSE T  TFRGPS TH+D
Sbjct:    1 MVSVAEIRKAQRAEGPATILAIGTANPANKVEQATYPDFYFKITNSEHKTELKEKFQRMCDKSMIKSRYMYLTEEILKENPSLCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLD 207          
The following BLAST results are available for this feature:
BLAST of FC868846 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CHS8_BROFI1.601e-7869.61Chalcone synthase 8 OS=Bromheadia finlaysoniana GN... [more]
CHS4_PEA1.601e-7870.05Chalcone synthase 4 OS=Pisum sativum GN=CHS4 PE=3 ... [more]
CHS4_BROFI1.601e-7869.61Chalcone synthase 4 OS=Bromheadia finlaysoniana GN... [more]
CHS3_BROFI1.601e-7869.61Chalcone synthase 3 OS=Bromheadia finlaysoniana GN... [more]
CHS2_PEA1.601e-7869.57Chalcone synthase 2 OS=Pisum sativum GN=CHS2 PE=2 ... [more]
CHS1_TRISU2.091e-7870.53Chalcone synthase 1 OS=Trifolium subterraneum GN=C... [more]
CHS1_SOLLC2.091e-7869.08Chalcone synthase 1 OS=Solanum lycopersicum GN=CHS... [more]
CHSY_PINST2.731e-7868.60Chalcone synthase OS=Pinus strobus GN=CHS PE=2 SV=... [more]
CHS9_MEDSA3.566e-7869.08Chalcone synthase 9 OS=Medicago sativa GN=CHS9 PE=... [more]
CHS6_TRISU3.566e-7870.53Chalcone synthase 6 OS=Trifolium subterraneum GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC31005E09EF AbioticL1 Citrus clementina cDNA clone C31005E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868846 ID=FC868846; Name=FC868846; organism=Citrus clementina; type=EST; length=700bp
AGACACAATCGCGAAAGCGCATACTTATTAATTAACTAAGTTTAAGTACT
GTTTTGGAAGCAATCTGACGATCAGAGATGGTAACAATGGAGGAGATTAG
AAAGGCTCAGCGAGCCGAGGGCCTGGCGACCATCCTCGCCATCAGCACGG
CAACGCCGCCCAATTGTGTCATCCAAGCTGATTATCCTGACTATTACTTC
GGGATCACCAACAGCGAGCACATGACTGAGCTCAAAGAGAAGTTCAAGCT
CTTGTGTGAGAAGTCGATGATAAGAAAGCGTCACATGTGCTTAACAGAAG
AGATTTTAAAAGCAAACCCTAATATGTGCTTACACATGGGGACATCACTC
GATGCGCGCCAGGACATTTCTCTTGTTGAAGTACCAAAGCTTGGCAAAGA
GGCGGCAACCAAAGCTATCAAAGAATGGGGACAGCCCAAATCCAATATCA
CCCATCTCATTTTCTGCACATCTGCAGGCGTCGACATGCCTGGCGCTGAC
TATCAGCTCACAAGACTCATCGGCCTCAACCCGGATGTTAAGCGTATGAT
GATATATCAACAAGGGTGTTATGCTGGCGCCACCATCCTTCGTCTTGCTA
AAGATTTGGCTGAAAACAAACAGGGCTCTCGTGTTCTTGTTGTTTGTTCT
GAGAACACAATCCCCACTTTCCGTGGGCCGTCTTATACCCATATTGATTC
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