FC868853
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868853 vs. ExPASy Swiss-Prot
Match: PP386_ARATH (Pentatricopeptide repeat-containing protein At5g15340, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H91 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 2.624e-18 Identity = 30/54 (55.56%), Postives = 41/54 (75.93%), Query Frame = -1 Query: 108 PEAVIQVTKNVRVCNDYHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 269 P + V KN+R+C D HSA + +S +Y R+II+RD NRFH F+GG+CSC+DYW Sbjct: 570 PSTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIRDRNRFHQFKGGSCSCSDYW 623 HSP 2 Score: 35.039 bits (79), Expect = 2.624e-18 Identity = 20/59 (33.90%), Postives = 33/59 (55.93%), Query Frame = -3 Query: 268 KEVYKKVESMSVEIKMAGCMPDLSCALHDVE--VEDRELMMYYPSENLDVVFGIMNLIP 438 KE+Y K+ + I+ AG +PD+S + E +E++E + SE L V FG++ P Sbjct: 512 KEIYLKLNEVIERIRSAGYVPDVSGLVSHSEGDLEEKEQALCCHSEKLAVCFGLLETKP 570
BLAST of FC868853 vs. ExPASy Swiss-Prot
Match: PP390_ARATH (Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 4.408e-18 Identity = 29/52 (55.77%), Postives = 40/52 (76.92%), Query Frame = -1 Query: 108 AVIQVTKNVRVCNDYHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 263 A I++TKN+RVC D H+AF ++S I II+RD++RFHHF+ G+CSC YW Sbjct: 799 AAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850 HSP 2 Score: 39.2762 bits (90), Expect = 4.408e-18 Identity = 18/53 (33.96%), Postives = 33/53 (62.26%), Query Frame = -3 Query: 280 KEVYKKVESMSVEIKMAGCMPDLSCALHDVEVEDRELMMYYPSENLDVVFGIM 438 KE+Y+ + IK G +P+ ALHDV+ E+++ +++ SE L + +GI+ Sbjct: 741 KEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGIL 793
BLAST of FC868853 vs. ExPASy Swiss-Prot
Match: PP227_ARATH (Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 5.766e-18 Identity = 23/50 (46.00%), Postives = 33/50 (66.00%), Query Frame = -1 Query: 108 IQVTKNVRVCNDYHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 257 I+V KN+R+C D H+ + S ++ R++ +RD NRFH G CSC DYW Sbjct: 579 IRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628 HSP 2 Score: 51.9878 bits (123), Expect = 5.766e-18 Identity = 23/53 (43.40%), Postives = 38/53 (71.70%), Query Frame = -3 Query: 280 KEVYKKVESMSVEIKMAGCMPDLSCALHDVEVEDRELMMYYPSENLDVVFGIM 438 +EV K++ +S+++K AG +PDLSC L+DV+ E +E M+ SE L + FG++ Sbjct: 519 EEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLI 571
BLAST of FC868853 vs. ExPASy Swiss-Prot
Match: PPR71_ARATH (Pentatricopeptide repeat-containing protein At1g34160 OS=Arabidopsis thaliana GN=PCMP-H68 PE=2 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 7.508e-18 Identity = 28/53 (52.83%), Postives = 39/53 (73.58%), Query Frame = -1 Query: 108 EAVIQVTKNVRVCNDYHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 266 E+ ++V N+R+C D H F+ IS IY+R+IIVRD RFH F+ G+CSC D+W Sbjct: 529 ESPVRVINNLRICGDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581 HSP 2 Score: 41.2022 bits (95), Expect = 7.508e-18 Identity = 17/53 (32.08%), Postives = 32/53 (60.38%), Query Frame = -3 Query: 280 KEVYKKVESMSVEIKMAGCMPDLSCALHDVEVEDRELMMYYPSENLDVVFGIM 438 +E+Y+K++ + +I+ G + LHD+ E++E + Y SE L V +G+M Sbjct: 469 REIYEKIDEIRFKIREDGYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLM 521
BLAST of FC868853 vs. ExPASy Swiss-Prot
Match: PP140_ARATH (Pentatricopeptide repeat-containing protein At2g01510, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=2 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 9.761e-18 Identity = 26/54 (48.15%), Postives = 37/54 (68.52%), Query Frame = -1 Query: 108 PEAVIQVTKNVRVCNDYHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 269 P I+V KN+R C+D H+ +F+S + +II+RD NRFHHF G CSC ++W Sbjct: 531 PGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584 HSP 2 Score: 45.0542 bits (105), Expect = 9.761e-18 Identity = 18/53 (33.96%), Postives = 34/53 (64.15%), Query Frame = -3 Query: 280 KEVYKKVESMSVEIKMAGCMPDLSCALHDVEVEDRELMMYYPSENLDVVFGIM 438 K +Y+K++ + +I+ G +PD HDVE+E++E + + SE L + FG++ Sbjct: 475 KAIYEKLDEILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLI 527
BLAST of FC868853 vs. ExPASy Swiss-Prot
Match: PPR84_ARATH (Pentatricopeptide repeat-containing protein At1g56690, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.643e-17 Identity = 34/55 (61.82%), Postives = 41/55 (74.55%), Query Frame = -1 Query: 108 PEAV-IQVTKNVRVCNDYHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 269 PE V I+V KN+RVC D H+A + IS + R+II+RDANRFHHF G CSC DYW Sbjct: 650 PEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704 HSP 2 Score: 33.113 bits (74), Expect = 1.643e-17 Identity = 16/42 (38.10%), Postives = 25/42 (59.52%), Query Frame = -3 Query: 274 IKMAGCMPDLSCALHDVEVEDRELMMYYPSENLDVVFGIMNL 399 ++ AG PD S LHDV+ E++ + SE L V +G++ L Sbjct: 608 LREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKL 649
BLAST of FC868853 vs. ExPASy Swiss-Prot
Match: PP354_ARATH (Pentatricopeptide repeat-containing protein At4g37380, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.618e-17 Identity = 28/54 (51.85%), Postives = 40/54 (74.07%), Query Frame = -1 Query: 108 PEAVIQVTKNVRVCNDYHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 269 P + +++ KN+RVC+D H+ + IS I RKI++RD NRFHHF G+CSC D+W Sbjct: 579 PGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632 HSP 2 Score: 38.1206 bits (87), Expect = 3.618e-17 Identity = 17/57 (29.82%), Postives = 32/57 (56.14%), Query Frame = -3 Query: 268 KEVYKKVESMSVEIKMAGCMPDLSCALHDVEVEDRELMMYYPSENLDVVFGIMNLIP 438 KE+Y + +S IK G +P+ + L D+E ++E + SE L + +G+++ P Sbjct: 523 KEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKP 579
BLAST of FC868853 vs. ExPASy Swiss-Prot
Match: PP367_ARATH (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 7.951e-17 Identity = 30/54 (55.56%), Postives = 38/54 (70.37%), Query Frame = -1 Query: 108 PEAVIQVTKNVRVCNDYHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 269 P I++ KN+RVC D H+ + IS +Y R++IVRD NRFHHF G CSC DYW Sbjct: 569 PGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRNGVCSCRDYW 622 HSP 2 Score: 31.187 bits (69), Expect = 7.951e-17 Identity = 15/56 (26.79%), Postives = 31/56 (55.36%), Query Frame = -3 Query: 268 EVYKKVESMSVEIKMAGCMPDLSCALHDVEVEDRELMMYYPSENLDVVFGIMNLIP 435 ++ +K E + +I++ G + A DV+ E++E ++ SE L + +G+M P Sbjct: 514 KIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSIHMHSEKLAIAYGMMKTKP 569
BLAST of FC868853 vs. ExPASy Swiss-Prot
Match: PP353_ARATH (Pentatricopeptide repeat-containing protein At4g37170 OS=Arabidopsis thaliana GN=PCMP-H5 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.031e-16 Identity = 35/59 (59.32%), Postives = 40/59 (67.80%), Query Frame = -1 Query: 108 ILSPE--AVIQVTKNVRVCNDYHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 278 ILS E I+V KN+R C D H A +FIS I +RKI VRD+ RFH FE G CSC DYW Sbjct: 633 ILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691 HSP 2 Score: 36.5798 bits (83), Expect = 1.031e-16 Identity = 18/53 (33.96%), Postives = 30/53 (56.60%), Query Frame = -3 Query: 277 EVYKKVESMSVEIKMAGCMPDLSCALHDVEVEDRELMMYYPSENLDVVFGIMN 435 ++ + + + ++K G +P S LHDVE E +E + Y SE L V F I++ Sbjct: 583 QIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILS 635
BLAST of FC868853 vs. ExPASy Swiss-Prot
Match: PP206_ARATH (Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.256e-16 Identity = 32/58 (55.17%), Postives = 39/58 (67.24%), Query Frame = -1 Query: 108 ILSPEAV-IQVTKNVRVCNDYHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 278 I +PE I V KN+R C D H+A + IS I +R+I VRD +RFHHF G CSC DYW Sbjct: 768 ISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825 HSP 2 Score: 35.8094 bits (81), Expect = 2.256e-16 Identity = 16/53 (30.19%), Postives = 30/53 (56.60%), Query Frame = -3 Query: 277 EVYKKVESMSVEIKMAGCMPDLSCALHDVEVEDRELMMYYPSENLDVVFGIMN 435 E+ +K+ ++ EI+ G PD S + DV+ + + + Y SE L V F +++ Sbjct: 717 EIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALIS 769 The following BLAST results are available for this feature:
BLAST of FC868853 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868853 ID=FC868853; Name=FC868853; organism=Citrus clementina; type=EST; length=440bpback to top |