FC868860

Overview
NameFC868860
Unique NameFC868860
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length661
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15382 contig Ccv1_Contig15382:15..675. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868860 vs. ExPASy Swiss-Prot
Match: ANXA1_PONAB (Annexin A1 OS=Pongo abelii GN=ANXA1 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 8.230e-18
Identity = 67/196 (34.18%), Postives = 96/196 (48.98%), Query Frame = 3
Query:   63 PTQTPSAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLWTLTPAERDAYLANEATKRLTSSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKLLVPLVSTFRYDGGDVNMMLAKN*G*IIRDKISDKDYAHEELIR-ILTTRSKAQI 647
            PT  PS+  D   LHKA    G +EA II VL  RN AQR+ I+  Y +  G+ L + L K L+   E  VL    TPA+ DA     A K L +    L+EI  +R+++++    + Y    K+ L +D+   TSGDFR  L+ L    R +   VN  LA +    + +    +      +   ILTTRS  Q+
Sbjct:   40 PTFNPSS--DVAALHKAIMVKGVDEATIIDVLTKRNNAQRQQIKAAYLQETGKPLDETLKKALTGHLEEVVLALLKTPAQFDADELRAAMKGLGTDEDTLIEILASRTNKEIRDINRVYREELKRDLAKDITSDTSGDFRNALLSLAKGDRSEDFGVNEDLADSDARALYEAGERRKGTDVNVFNTILTTRSYPQL 233          
BLAST of FC868860 vs. ExPASy Swiss-Prot
Match: ANXA1_PANTR (Annexin A1 OS=Pan troglodytes GN=ANXA1 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 8.230e-18
Identity = 66/196 (33.67%), Postives = 96/196 (48.98%), Query Frame = 3
Query:   63 PTQTPSAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLWTLTPAERDAYLANEATKRLTSSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKLLVPLVSTFRYDGGDVNMMLAKN*G*IIRDKISDKDYAHEELIR-ILTTRSKAQI 647
            PT  PS+  D   LHKA    G +EA II +L  RN AQR+ I+  Y +  G+ L + L K L+   E  VL    TPA+ DA     A K L +    L+EI  +R+++++    + Y    K+ L +D+   TSGDFR  L+ L    R +   VN  LA +    + +    +      +   ILTTRS  Q+
Sbjct:   40 PTFNPSS--DVAALHKAIMVKGVDEATIIDILTRRNNAQRQQIKAAYLQETGKPLDETLKKALTGHLEEVVLALLKTPAQFDADELRAAMKGLGTDEDTLIEILASRTNKEIRDINRVYREELKRDLAKDITSDTSGDFRNALLSLAKGDRSEDFGVNEDLADSDARALYEAGERRKGTDVNVFNTILTTRSYPQL 233          
BLAST of FC868860 vs. ExPASy Swiss-Prot
Match: ANXA5_MOUSE (Annexin A5 OS=Mus musculus GN=Anxa5 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.075e-17
Identity = 57/159 (35.85%), Postives = 83/159 (52.20%), Query Frame = 3
Query:   45 MATLKVPTQTPS--AAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLWTLTPAERDAYLANEATKRLTSSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKLLVPLVSTFR 515
            MAT    T  P      DAE L KA +G GT+E  I+++L  R+ AQR+ I + +   +G DL+  L  EL+  FE+ ++         DAY    A K   +   VL EI  +R+  +L A KQ Y   Y  +LE+DV   TSG ++++LV L+   R
Sbjct:    1 MATRGTVTDFPGFDGRADAEVLRKAMKGLGTDEDSILNLLTSRSNAQRQEIAQEFKTLFGRDLVDDLKSELTGKFEKLIVAMMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEELSAIKQVYEEEYGSNLEDDVVGDTSGYYQRMLVVLLQANR 159          
BLAST of FC868860 vs. ExPASy Swiss-Prot
Match: ANXA1_HUMAN (Annexin A1 OS=Homo sapiens GN=ANXA1 PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.075e-17
Identity = 66/196 (33.67%), Postives = 96/196 (48.98%), Query Frame = 3
Query:   63 PTQTPSAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLWTLTPAERDAYLANEATKRLTSSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKLLVPLVSTFRYDGGDVNMMLAKN*G*IIRDKISDKDYAHEELIR-ILTTRSKAQI 647
            PT  PS+  D   LHKA    G +EA II +L  RN AQR+ I+  Y +  G+ L + L K L+   E  VL    TPA+ DA     A K L +    L+EI  +R+++++    + Y    K+ L +D+   TSGDFR  L+ L    R +   VN  LA +    + +    +      +   ILTTRS  Q+
Sbjct:   40 PTFNPSS--DVAALHKAIMVKGVDEATIIDILTKRNNAQRQQIKAAYLQETGKPLDETLKKALTGHLEEVVLALLKTPAQFDADELRAAMKGLGTDEDTLIEILASRTNKEIRDINRVYREELKRDLAKDITSDTSGDFRNALLSLAKGDRSEDFGVNEDLADSDARALYEAGERRKGTDVNVFNTILTTRSYPQL 233          
BLAST of FC868860 vs. ExPASy Swiss-Prot
Match: ANX10_MOUSE (Annexin A10 OS=Mus musculus GN=Anxa10 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.075e-17
Identity = 57/187 (30.48%), Postives = 99/187 (52.94%), Query Frame = 3
Query:   90 DAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLWTLTPAERDAYLANEATKRLTSSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKLLVPLVSTFRYDGGDVNMMLAKN*G*IIRDKISDKDYAHEELIR-ILTTRSKAQI 647
            DA+ L    QG+  N+ ++I +L  R+ AQR++I   Y   YG DL+  L ++LSS F+  ++     P   DA+    A K   +    L+EI  +R++ ++F  ++AY  +Y  +L+ED+   TSG FR  L+ LV   R +G     M A++   ++ +    K   H+ +++ IL  +S  Q+
Sbjct:   22 DAQMLGGRLQGFDCNKDMLIDILTQRSNAQRQMIAGTYQSMYGRDLISVLKEQLSSHFKEVMVGLMYPPPSYDAHELWHAMKGPGTDENCLIEILASRTNGEIFQMREAYCLQYSNNLQEDIYSETSGHFRDTLMNLVQANREEGYSDPAMAAQD-AMVLWEACQQKTGEHKTMMQMILCNKSYPQL 207          
BLAST of FC868860 vs. ExPASy Swiss-Prot
Match: ANXA5_MACFA (Annexin A5 OS=Macaca fascicularis GN=ANXA5 PE=2 SV=3)

HSP 1 Score: 89.7373 bits (221), Expect = 1.404e-17
Identity = 53/142 (37.32%), Postives = 77/142 (54.23%), Query Frame = 3
Query:   90 DAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLWTLTPAERDAYLANEATKRLTSSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKLLVPLVSTFR 515
            DAE L KA +G GT+E  I+++L  R+ AQR+ I   +   +G DLL  L  EL+  FE+ ++         DAY    A K   +   VL EI  +R+  +L A K+ Y   Y  SLE+DV   TSG ++++LV L+   R
Sbjct:   20 DAETLRKAMKGLGTDEESILTLLTSRSNAQRQEISAAFKTLFGRDLLDDLKSELTGKFEKLIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEELRAIKEVYEEEYGSSLEDDVVGDTSGYYQRMLVVLLQANR 161          
BLAST of FC868860 vs. ExPASy Swiss-Prot
Match: ANXA5_CHICK (Annexin A5 OS=Gallus gallus GN=ANXA5 PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.404e-17
Identity = 65/191 (34.03%), Postives = 99/191 (51.83%), Query Frame = 3
Query:   81 AAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLWTLTPAE-RDAYLANEATKRLTSSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKLLVPLVSTFRYDGGDVNMMLAKN*G*IIRDKISDKDYAHEE-LIRILTTRSKAQI 647
            A  DAE L KA +G GT+E  I+ +L  RN AQR+ I   +   +G DL+  L  EL+  FE ++++  + PA   DA+    A K   ++  VL EI  +R+  ++   KQ Y   Y+ +LE+ +   TSG F++LLV L+   R   G V+  L +    ++      K    EE  I IL TRS + +
Sbjct:   17 ARADAEALRKAMKGMGTDEETILKILTSRNNAQRQEIASAFKTLFGRDLVDDLKSELTGKFE-TLMVSLMRPARIFDAHALKHAIKGAGTNEKVLTEILASRTPAEVQNIKQVYMQEYEANLEDKITGETSGHFQRLLVVLLQANRDPDGRVDEALVEKDAQVLFRAGELKWGTDEETFITILGTRSVSHL 206          
BLAST of FC868860 vs. ExPASy Swiss-Prot
Match: ANXA5_BOVIN (Annexin A5 OS=Bos taurus GN=ANXA5 PE=1 SV=3)

HSP 1 Score: 89.3521 bits (220), Expect = 1.833e-17
Identity = 53/142 (37.32%), Postives = 77/142 (54.23%), Query Frame = 3
Query:   90 DAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLWTLTPAERDAYLANEATKRLTSSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKLLVPLVSTFR 515
            DAE L KA +G GT+E  I+++L  R+ AQR+ I   +   +G DLL  L  EL+  FE+ ++         DAY    A K   +   VL EI  +R+  +L A +Q Y   Y  SLE+DV   TSG ++++LV L+   R
Sbjct:   20 DAETLRKAMKGLGTDEETILTLLTSRSNAQRQEIAVAFKTLFGRDLLDDLKSELTGKFEKLIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEELRAIEQVYEEEYGSSLEDDVVGDTSGYYQRMLVVLLQANR 161          
BLAST of FC868860 vs. ExPASy Swiss-Prot
Match: ANXA1_RAT (Annexin A1 OS=Rattus norvegicus GN=Anxa1 PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 3.127e-17
Identity = 59/162 (36.42%), Postives = 81/162 (50.00%), Query Frame = 3
Query:   63 PTQTPSAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLWTLTPAERDAYLANEATKRLTSSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKLLVPLVSTFRYDGGDVNMMLA 548
            P+  PS+  D   LHKA    G +EA II +L  R  AQR+ I+  Y +  G+ L + L K L+   E  VL    TPA+ DA     A K L +    L+EI  TRS++ +    + Y    K+ L +D+   TSGDFR  L+ L    R +   VN  LA
Sbjct:   40 PSFNPSS--DVAALHKAIMVKGVDEATIIDILTKRTNAQRQQIKAAYLQETGKPLDETLKKALTGHLEEVVLAMLKTPAQFDADELRAAMKGLGTDEDTLIEILTTRSNQQIREITRVYREELKRDLAKDITSDTSGDFRNALLALAKGDRCEDMSVNQDLA 199          
BLAST of FC868860 vs. ExPASy Swiss-Prot
Match: ANXA1_RABIT (Annexin A1 OS=Oryctolagus cuniculus GN=ANXA1 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.127e-17
Identity = 58/162 (35.80%), Postives = 84/162 (51.85%), Query Frame = 3
Query:   63 PTQTPSAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLWTLTPAERDAYLANEATKRLTSSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKLLVPLVSTFRYDGGDVNMMLA 548
            P   PS+  D   LH+A    G +EA II +L  RN AQR+ I+  Y +  G+ L + L K L+   E  VL    TPA+ DA     A K L +    L+EI  +R+++++    + Y    K+ L +D+A  TSGDF+K L+ L    R +   VN  LA
Sbjct:   40 PAFNPSS--DVAALHQAIMVKGVDEATIIDILTKRNNAQRQQIKAAYLQEKGKPLDEVLKKALTGHLEEVVLALLKTPAQFDADELRAAMKGLGTDEDTLIEILASRNNKEIREINRVYREELKRDLAKDIASDTSGDFQKALLSLAKGDRSEDFGVNEDLA 199          
The following BLAST results are available for this feature:
BLAST of FC868860 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
ANXA1_PONAB8.230e-1834.18Annexin A1 OS=Pongo abelii GN=ANXA1 PE=2 SV=1[more]
ANXA1_PANTR8.230e-1833.67Annexin A1 OS=Pan troglodytes GN=ANXA1 PE=2 SV=1[more]
ANXA5_MOUSE1.075e-1735.85Annexin A5 OS=Mus musculus GN=Anxa5 PE=1 SV=1[more]
ANXA1_HUMAN1.075e-1733.67Annexin A1 OS=Homo sapiens GN=ANXA1 PE=1 SV=2[more]
ANX10_MOUSE1.075e-1730.48Annexin A10 OS=Mus musculus GN=Anxa10 PE=2 SV=1[more]
ANXA5_MACFA1.404e-1737.32Annexin A5 OS=Macaca fascicularis GN=ANXA5 PE=2 SV... [more]
ANXA5_CHICK1.404e-1734.03Annexin A5 OS=Gallus gallus GN=ANXA5 PE=1 SV=2[more]
ANXA5_BOVIN1.833e-1737.32Annexin A5 OS=Bos taurus GN=ANXA5 PE=1 SV=3[more]
ANXA1_RAT3.127e-1736.42Annexin A1 OS=Rattus norvegicus GN=Anxa1 PE=1 SV=2[more]
ANXA1_RABIT3.127e-1735.80Annexin A1 OS=Oryctolagus cuniculus GN=ANXA1 PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionC31005G02EF AbioticL1 Citrus clementina cDNA clone C31005G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868860 ID=FC868860; Name=FC868860; organism=Citrus clementina; type=EST; length=661bp
CCTCGTCATTTTCTATTCTACAAAAACGCTGAAACAAATCGACAATGGCG
ACCCTTAAAGTGCCAACCCAGACCCCTTCTGCTGCTGAGGATGCTGAGCA
ACTCCACAAAGCCTTCCAAGGATGGGGCACGAATGAGGCCCTCATTATAT
CTGTCTTGGCTCACAGAAATGCAGCTCAGCGCAAGTTGATTCGAGAAATC
TACAACGAAACTTATGGGGAAGACCTTCTTAAAGCACTGGACAAAGAACT
TTCAAGTGACTTTGAGAGATCTGTACTGCTATGGACATTGACTCCTGCTG
AGCGTGATGCTTATTTGGCAAATGAAGCGACAAAGAGATTGACTTCAAGC
AACTGGGTTCTCATGGAAATTGCCTGTACTAGATCTTCAAGAGACCTATT
TGCTGCAAAGCAGGCCTACCATGCTCGTTACAAGAAATCCCTAGAGGAAG
ATGTTGCATATCACACATCTGGGGACTTCCGCAAGCTTTTGGTTCCTCTT
GTGAGCACATTTCGATATGATGGAGGAGATGTGAACATGATGTTGGCAAA
GAACTGAGGCTAGATTATCCGTGACAAGATTTCAGACAAGGATTATGCTC
ATGAGGAGCTTATCAGGATTCTGACTACAAGGAGCAAGGCACAGATAAAT
GCGACCCTCAA
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