FC868861
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868861 vs. ExPASy Swiss-Prot
Match: KCAB1_RABIT (Voltage-gated potassium channel subunit beta-1 OS=Oryctolagus cuniculus GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.658e-18 Identity = 65/216 (30.09%), Postives = 109/216 (50.46%), Query Frame = 3 Query: 39 VPRVKLGTQGLEVSKLGFGCMNLSGGYSSPVSEEDGITMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREKILVATKFGIAGIGDTDIIVKG-SPDYVRSCCEASLKRLDVDYIDLYYQHRVDKSVAIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH------PIAAVQMEWSLWTRD-IEEDIIPLCRELGIGIXPFSPL 656 +P LG GL VS LG G GG +S+E ++ A+ G+ FDTA+VY EV+LG +K+ R +++ TK G +T+ +G S ++ + SL+RL ++Y+D+ + +R D + +EE + M ++ +G Y G S S I A++V P Q E+ L+ R+ +E + L ++G+G +SPL Sbjct: 89 MPHRNLGKSGLRVSCLGLGTWVTFGGQ---ISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETE---RGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPL 298
BLAST of FC868861 vs. ExPASy Swiss-Prot
Match: KCAB1_HUMAN (Voltage-gated potassium channel subunit beta-1 OS=Homo sapiens GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.658e-18 Identity = 65/216 (30.09%), Postives = 109/216 (50.46%), Query Frame = 3 Query: 39 VPRVKLGTQGLEVSKLGFGCMNLSGGYSSPVSEEDGITMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREKILVATKFGIAGIGDTDIIVKG-SPDYVRSCCEASLKRLDVDYIDLYYQHRVDKSVAIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH------PIAAVQMEWSLWTRD-IEEDIIPLCRELGIGIXPFSPL 656 +P LG GL VS LG G GG +S+E ++ A+ G+ FDTA+VY EV+LG +K+ R +++ TK G +T+ +G S ++ + SL+RL ++Y+D+ + +R D + +EE + M ++ +G Y G S S I A++V P Q E+ L+ R+ +E + L ++G+G +SPL Sbjct: 89 MPHRNLGKSGLRVSCLGLGTWVTFGGQ---ISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETE---RGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPL 298
BLAST of FC868861 vs. ExPASy Swiss-Prot
Match: KCAB1_CHICK (Voltage-gated potassium channel subunit beta-1 OS=Gallus gallus GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.658e-18 Identity = 66/211 (31.28%), Postives = 107/211 (50.71%), Query Frame = 3 Query: 54 LGTQGLEVSKLGFGCMNLSGGYSSPVSEEDGITMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLP--REKILVATKFGIAGIGDTDIIVKG-SPDYVRSCCEASLKRLDVDYIDLYYQHRVDKSVAIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH------PIAAVQMEWSLWTRD-IEEDIIPLCRELGIGIXPFSPL 656 LG GL VS LG G GG +S+E ++ A+ G+ FDTA+VY EV+LG LK+ R +++ TK G +T+ +G S ++ ASL+RL ++Y+D+ + +R D + +EE + M ++ +G Y G S S I A++V P Q E+ L+ R+ +E + L ++G+G +SPL Sbjct: 76 LGKSGLRVSCLGLGTWVTFGGQ---ISDEVAEQLMTIAYESGVNLFDTAEVYAAGKAEVILGNILKKKGWRRSSLVITTKLYWGGKAETE---RGLSRKHIIEGLRASLQRLQLEYVDVVFANRPDNNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNLIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPL 280
BLAST of FC868861 vs. ExPASy Swiss-Prot
Match: KCAB2_HUMAN (Voltage-gated potassium channel subunit beta-2 OS=Homo sapiens GN=KCNAB2 PE=1 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 2.166e-18 Identity = 70/228 (30.70%), Postives = 115/228 (50.44%), Query Frame = 3 Query: 3 TTSSNMAEEKLQVPRVKLGTQGLEVSKLGFGCMNLSGGYSSPVSEEDGITMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLP--REKILVATKFGIAGIGDTDIIVKG-SPDYVRSCCEASLKRLDVDYIDLYYQHRVDKSVAIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV------HPIAAVQMEWSLWTRD-IEEDIIPLCRELGIGIXPFSPL 656 +T + +LQ R LG GL VS LG G GG + E +T+ A+ GI FDTA+VY EV+LG +K+ R +++ TK G +T+ +G S ++ +ASL+RL ++Y+D+ + +R D + +EET+ M ++ +G Y G S S I A++V P Q E+ ++ R+ +E + L ++G+G +SPL Sbjct: 26 STRYGSPKRQLQFYR-NLGKSGLRVSCLGLGTWVTFGGQITDEMAEQLMTL---AYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETE---RGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLTPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPL 246
BLAST of FC868861 vs. ExPASy Swiss-Prot
Match: KCAB2_BOVIN (Voltage-gated potassium channel subunit beta-2 OS=Bos taurus GN=KCNAB2 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.166e-18 Identity = 70/228 (30.70%), Postives = 115/228 (50.44%), Query Frame = 3 Query: 3 TTSSNMAEEKLQVPRVKLGTQGLEVSKLGFGCMNLSGGYSSPVSEEDGITMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLP--REKILVATKFGIAGIGDTDIIVKG-SPDYVRSCCEASLKRLDVDYIDLYYQHRVDKSVAIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH------PIAAVQMEWSLWTRD-IEEDIIPLCRELGIGIXPFSPL 656 +T + +LQ R LG GL VS LG G GG + E +T+ A+ GI FDTA+VY EV+LG +K+ R +++ TK G +T+ +G S ++ +ASL+RL ++Y+D+ + +R D + +EET+ M ++ +G Y G S S I A++V P Q E+ ++ R+ +E + L ++G+G +SPL Sbjct: 26 STRYGSPKRQLQFYR-NLGKSGLRVSCLGLGTWVTFGGQITDEMAEQLMTL---AYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETE---RGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPL 246
BLAST of FC868861 vs. ExPASy Swiss-Prot
Match: KCAB2_RAT (Voltage-gated potassium channel subunit beta-2 OS=Rattus norvegicus GN=Kcnab2 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.829e-18 Identity = 70/228 (30.70%), Postives = 115/228 (50.44%), Query Frame = 3 Query: 3 TTSSNMAEEKLQVPRVKLGTQGLEVSKLGFGCMNLSGGYSSPVSEEDGITMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLP--REKILVATKFGIAGIGDTDIIVKG-SPDYVRSCCEASLKRLDVDYIDLYYQHRVDKSVAIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH------PIAAVQMEWSLWTRD-IEEDIIPLCRELGIGIXPFSPL 656 +T + +LQ R LG GL VS LG G GG + E +T+ A+ GI FDTA+VY EV+LG +K+ R +++ TK G +T+ +G S ++ +ASL+RL ++Y+D+ + +R D + +EET+ M ++ +G Y G S S I A++V P Q E+ ++ R+ +E + L ++G+G +SPL Sbjct: 26 STRYGSPKRQLQFYR-NLGKSGLRVSCLGLGTWVTFGGQITDEMAEHLMTL---AYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETE---RGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPL 246
BLAST of FC868861 vs. ExPASy Swiss-Prot
Match: KCAB2_MOUSE (Voltage-gated potassium channel subunit beta-2 OS=Mus musculus GN=Kcnab2 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.829e-18 Identity = 70/228 (30.70%), Postives = 115/228 (50.44%), Query Frame = 3 Query: 3 TTSSNMAEEKLQVPRVKLGTQGLEVSKLGFGCMNLSGGYSSPVSEEDGITMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLP--REKILVATKFGIAGIGDTDIIVKG-SPDYVRSCCEASLKRLDVDYIDLYYQHRVDKSVAIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH------PIAAVQMEWSLWTRD-IEEDIIPLCRELGIGIXPFSPL 656 +T + +LQ R LG GL VS LG G GG + E +T+ A+ GI FDTA+VY EV+LG +K+ R +++ TK G +T+ +G S ++ +ASL+RL ++Y+D+ + +R D + +EET+ M ++ +G Y G S S I A++V P Q E+ ++ R+ +E + L ++G+G +SPL Sbjct: 26 STRYGSPKRQLQFYR-NLGKSGLRVSCLGLGTWVTFGGQITDEMAEHLMTL---AYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETE---RGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPL 246
BLAST of FC868861 vs. ExPASy Swiss-Prot
Match: AAD14_YEAST (Putative aryl-alcohol dehydrogenase AAD14 OS=Saccharomyces cerevisiae GN=AAD14 PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 4.825e-18 Identity = 64/226 (28.32%), Postives = 108/226 (47.79%), Query Frame = 3 Query: 45 RVKLGTQGLEVSKLGFGCMNLS---GGYSSPVSEEDGITMIKHAFSKGITFFDTADVYGQNANEVLLGK--ALKQLPREKILVATKFGIAGIGDTDIIVKGSPDYVRSC----------CEASLKRLDVDYIDLYYQHRVDKSVAIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRA------HAVHPIAAVQMEWSLWTRDIEEDIIPLCRELGIGIXPFSPLG 659 RV T G+ VS L G ++ G+ +++E ++ + G DTA+ Y +E+ +G+ A ++L R++I++ATKF GD G C SL++L D+ID+ Y H D +IEE + + LV++GK+ Y+G+S+ + A H P + Q +W++ RD E DIIP+ R G+ + P+ +G Sbjct: 19 RVLSKTAGIRVSPLILGGASIGDAWSGFMGSMNKEQAFELLDAFYEAGGNCIDTANSYQNEESEIWIGEWMASRKL-RDQIVIATKF----TGDYKKYEVGGGKSANYCGNHKRSLHVSVRDSLRKLQTDWIDILYIHWWDYMSSIEEVMDSLHILVQQGKVLYLGVSDTPAWVVSAANYYATSHGKTPFSVYQGKWNVLNRDFERDIIPMARHFGMALAPWDVMG 239
BLAST of FC868861 vs. ExPASy Swiss-Prot
Match: KCAB1_RAT (Voltage-gated potassium channel subunit beta-1 OS=Rattus norvegicus GN=Kcnab1 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.301e-18 Identity = 64/211 (30.33%), Postives = 107/211 (50.71%), Query Frame = 3 Query: 54 LGTQGLEVSKLGFGCMNLSGGYSSPVSEEDGITMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREKILVATKFGIAGIGDTDIIVKG-SPDYVRSCCEASLKRLDVDYIDLYYQHRVDKSVAIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH------PIAAVQMEWSLWTRD-IEEDIIPLCRELGIGIXPFSPL 656 LG GL VS LG G GG +S+E ++ A+ G+ FDTA+VY EV+LG +K+ R +++ TK G +T+ +G S ++ + SL+RL ++Y+D+ + +R D + +EE + M ++ +G Y G S S I A++V P Q E+ L+ R+ +E + L ++G+G +SPL Sbjct: 76 LGKSGLRVSCLGLGTWVTFGGQ---ISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETE---RGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPL 280
BLAST of FC868861 vs. ExPASy Swiss-Prot
Match: KCAB1_MUSPU (Voltage-gated potassium channel subunit beta-1 OS=Mustela putorius GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.301e-18 Identity = 64/211 (30.33%), Postives = 107/211 (50.71%), Query Frame = 3 Query: 54 LGTQGLEVSKLGFGCMNLSGGYSSPVSEEDGITMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREKILVATKFGIAGIGDTDIIVKG-SPDYVRSCCEASLKRLDVDYIDLYYQHRVDKSVAIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH------PIAAVQMEWSLWTRD-IEEDIIPLCRELGIGIXPFSPL 656 LG GL VS LG G GG +S+E ++ A+ G+ FDTA+VY EV+LG +K+ R +++ TK G +T+ +G S ++ + SL+RL ++Y+D+ + +R D + +EE + M ++ +G Y G S S I A++V P Q E+ L+ R+ +E + L ++G+G +SPL Sbjct: 83 LGKSGLRVSCLGLGTWVTFGGQ---ISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETE---RGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPL 287 The following BLAST results are available for this feature:
BLAST of FC868861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868861 ID=FC868861; Name=FC868861; organism=Citrus clementina; type=EST; length=659bpback to top |