FC868861
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868861 vs. ExPASy Swiss-Prot
Match: KCAB3_RAT (Voltage-gated potassium channel subunit beta-3 OS=Rattus norvegicus GN=Kcnab3 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.517e-15 Identity = 64/211 (30.33%), Postives = 100/211 (47.39%), Query Frame = 3 Query: 54 LGTQGLEVSKLGFGCMNLSGGYSSPVSEEDGITMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREKILVATKFGIAGIGDTDIIVKG-SPDYVRSCCEASLKRLDVDYIDLYYQHRVDKSVAIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH------PIAAVQMEWSLWTRD-IEEDIIPLCRELGIGIXPFSPL 656 LG GL VS LG G G S + ED +T+ A+ G+ FDTA+VY E LG LK R ++ TK G +T+ +G S ++ + SL RL ++Y+D+ + +R D S +EE + M ++ +G Y G S S I A+++ P Q E + R+ +E + L ++G+G +SPL Sbjct: 83 LGKSGLRVSCLGLGTWVTFGSQISDETAEDLLTV---AYEHGVNLFDTAEVYAAGKAERTLGNILKSKGWRRSSYVITTKIFWGGQAETE---RGLSRKHIIEGLQGSLDRLQLEYVDIVFANRSDPSSPMEEIVRAMTYVINQGLALYWGTSRWSAAEIMEAYSMARQFNLIPPVCEQAENHFFQREKVEMQLPELYHKIGVGSVTWSPL 287
BLAST of FC868861 vs. ExPASy Swiss-Prot
Match: YDBC_ECOLI (Putative oxidoreductase ydbC OS=Escherichia coli (strain K12) GN=ydbC PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.478e-14 Identity = 56/210 (26.67%), Postives = 102/210 (48.57%), Query Frame = 3 Query: 54 LGTQGLEVSKLGFGCMNLSGG--YSSPVSEEDGITMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKILVATKFGIAGIGDTDIIVKGSPDYVRSCCEASLKRLDVDYIDLYYQHRV------DKSVAIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPIAAVQMEWSLWTRDIEEDIIPLCRELGIGIXPFSPLG 659 LGT+ V++LG+G M L+G + P IT+++ A + G+ DT+D YG + ++ +AL + + + TK G D + SP ++ +L+ L +D +D+ + +IE ++ + ++ ++G +K+IGLS +P + A + I VQ E+++ R + I L + GI PF PLG Sbjct: 8 LGTKS--VNRLGYGAMQLAGPGVFGPPRDRHVAITVLREALALGVNHIDTSDFYGPHVTNQIIREALYPY-SDDLTIVTKIGARRGEDASWLPAFSPAELQKAVHDNLRNLGLDVLDVVNLRVMMGDGHGPAEGSIEASLTVLAEMQQQGLVKHIGLSNVTPTQVAEARKIAEIVCVQNEYNIAHRADDAMIDALAHD-GIAYVPFFPLG 213
BLAST of FC868861 vs. ExPASy Swiss-Prot
Match: AAD3_YEAST (Putative aryl-alcohol dehydrogenase AAD3 OS=Saccharomyces cerevisiae GN=AAD3 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.236e-14 Identity = 60/233 (25.75%), Postives = 109/233 (46.78%), Query Frame = 3 Query: 9 SSNMAEEKLQVPRVKLGTQGLEVSKLGFGCMNLSGGYSS---PVSEEDGITMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLP-REKILVATKF------GIAGIGDTDIIVKGSPDYVRSCCEASLKRLDVDYIDLYYQHRVDKSVAIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRA------HAVHPIAAVQMEWSLWTRDIEEDIIPLCRELGIGIXPFSPLG 659 S++ + KL R T ++VS L G ++ G S +++ ++ + G F D A+ +E +G+ ++ R++I++ATKF AG +T + SL++L D+ID+ Y H D +IEE + + LV++GK+ Y+G+S+ + A + P + Q +W++ RD E DIIP+ R G+ + P+ +G Sbjct: 4 SASDSSSKLGRLRFLSETAAIKVSPLILGEVSYDGARSDFLKSMNKNRAFELLDTFYEAGGNFIDAANNCQNEQSEEWIGEWIQSRRLRDQIVIATKFIKSDKKYKAGESNTANYCGNHKRSLHVSVRDSLRKLQTDWIDILYVHWWDYMSSIEEFMDSLHILVQQGKVLYLGVSDTPAWVVSAANYYATSYGKTPFSIYQGKWNVLNRDFERDIIPMARHFGMALAPWDVMG 236
BLAST of FC868861 vs. ExPASy Swiss-Prot
Match: KCAB3_HUMAN (Voltage-gated potassium channel subunit beta-3 OS=Homo sapiens GN=KCNAB3 PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 7.210e-14 Identity = 62/211 (29.38%), Postives = 98/211 (46.45%), Query Frame = 3 Query: 54 LGTQGLEVSKLGFGCMNLSGGYSSPVSEEDGITMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREKILVATKFGIAGIGDTDIIVKG-SPDYVRSCCEASLKRLDVDYIDLYYQHRVDKSVAIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH------PIAAVQMEWSLWTRD-IEEDIIPLCRELGIGIXPFSPL 656 LG GL VS LG G G S + ED +T+ A+ G+ FDTA+VY E LG LK R ++ TK G +T+ +G S ++ SL+RL + Y+D+ + +R D + +EE + M ++ +G Y G S I A+++ P Q E L+ R+ +E + L ++G+G + PL Sbjct: 83 LGKSGLRVSCLGLGTWVTFGSQISDETAEDVLTV---AYEHGVNLFDTAEVYAAGKAERTLGNILKSKGWRRSSYVITTKIFWGGQAETE---RGLSRKHIIEGLRGSLERLQLGYVDIVFANRSDPNCPMEEIVRAMTYVINQGLALYWGTSRWGAAEIMEAYSMARQFNLIPPVCEQAEHHLFQREKVEMQLPELYHKIGVGSVTWYPL 287
BLAST of FC868861 vs. ExPASy Swiss-Prot
Match: AAD10_YEAST (Putative aryl-alcohol dehydrogenase AAD10 OS=Saccharomyces cerevisiae GN=AAD10 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.971e-13 Identity = 43/145 (29.66%), Postives = 72/145 (49.66%), Query Frame = 3 Query: 261 REKILVATKFGI------AGIGDTDIIVKGSPDYVRSCCEASLKRLDVDYIDLYYQHRVDKSVAIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRA------HAVHPIAAVQMEWSLWTRDIEEDIIPLCRELGIGIXPFSPLG 659 R++I++ATKF G G + + SL++L D+ID+ Y H D +IEE + + LV++GK+ Y+G+S+ + A H P + Q +W++ RD E DIIP+ R G+ + P+ +G Sbjct: 7 RDQIVIATKFTTDYKGYDVGKGKSANFCGNHKRSLHVSVRDSLRKLQTDWIDILYVHWWDYMSSIEEVMDSLHILVQQGKVLYLGVSDTPAWVVSAANYYATSHGKTPFSIYQGKWNVLNRDFERDIIPMARHFGMALAPWDVMG 151
BLAST of FC868861 vs. ExPASy Swiss-Prot
Match: Y2320_MYCBO (Uncharacterized oxidoreductase Mb2320 OS=Mycobacterium bovis GN=Mb2320 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.360e-12 Identity = 55/200 (27.50%), Postives = 94/200 (47.00%), Query Frame = 3 Query: 72 EVSKLGFGCMNLSG---GYSSPVSEEDGITMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKILVATKFGIAGIGDTDIIVKGSPDYVRSCCEASLKRLDVDYIDLYYQHRVDKSVAIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV--HPIAAVQMEWSLWTRDIEEDIIPLCRELGIGIXPFSPL 656 +VS++G G GY + ++K A + G+T FDTA++YG +E +LG+AL E ++ + F +A P +++ AS +RL ++ I LY H+ + V + M+ L++ G I G+S S R+A A P+ + Q+ +SL D ED++P + +SPL Sbjct: 11 QVSRIGLGTWQFGSREWGYGDRYATGAARDIVKRARALGVTLFDTAEIYGLGKSERILGEALGDDRTEVVVASKVFPVAPF----------PAVIKNRERASARRLQLNRIPLYQIHQPNPVVPDSVIMPGMRDLLDSGDIGAAGVSNYSLARWRKADAALGRPVVSNQVHFSLAHPDALEDLVPFAELENRIVIAYSPL 200
BLAST of FC868861 vs. ExPASy Swiss-Prot
Match: Y2298_MYCTU (Uncharacterized oxidoreductase Rv2298/MT2355 OS=Mycobacterium tuberculosis GN=Rv2298 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.360e-12 Identity = 55/200 (27.50%), Postives = 94/200 (47.00%), Query Frame = 3 Query: 72 EVSKLGFGCMNLSG---GYSSPVSEEDGITMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKILVATKFGIAGIGDTDIIVKGSPDYVRSCCEASLKRLDVDYIDLYYQHRVDKSVAIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV--HPIAAVQMEWSLWTRDIEEDIIPLCRELGIGIXPFSPL 656 +VS++G G GY + ++K A + G+T FDTA++YG +E +LG+AL E ++ + F +A P +++ AS +RL ++ I LY H+ + V + M+ L++ G I G+S S R+A A P+ + Q+ +SL D ED++P + +SPL Sbjct: 11 QVSRIGLGTWQFGSREWGYGDRYATGAARDIVKRARALGVTLFDTAEIYGLGKSERILGEALGDDRTEVVVASKVFPVAPF----------PAVIKNRERASARRLQLNRIPLYQIHQPNPVVPDSVIMPGMRDLLDSGDIGAAGVSNYSLARWRKADAALGRPVVSNQVHFSLAHPDALEDLVPFAELENRIVIAYSPL 200
BLAST of FC868861 vs. ExPASy Swiss-Prot
Match: ARK74_HUMAN (Aflatoxin B1 aldehyde reductase member 4 OS=Homo sapiens GN=AKR7L PE=2 SV=5) HSP 1 Score: 71.633 bits (174), Expect = 3.956e-12 Identity = 59/197 (29.95%), Postives = 91/197 (46.19%), Query Frame = 3 Query: 93 GCMNLSGGYSSPVSEEDGITMIKHAF-SKGITFFDTADVYGQNANEVLLGKALKQLPRE--KILVATKFGIAGIGDTDIIVKGSPDYVRSCCEASLKRLDVDYIDLYYQHRVDKSVAIEETIGEMKKLVEEGKIKYIGLSE------ASPDTIRRAHAVHPIAAVQMEWSLWTRDIEEDIIPLCRELGIGIXPFSPL 656 G M + +P S + AF +G T DTA +Y +E +LG ++ ++ +ATK IG++ PD VRS E SLKRL +DL+Y H D S +EET+ +L +EGK +GLS A T+ +++ Q +S TR +E ++ P R G+ ++PL Sbjct: 15 GAMEMGRRMDAPTS-----AAVTRAFLERGHTEIDTAFLYSDGQSETILGGLGLRMGSSDCRVKIATKAN-PWIGNSL-----KPDSVRSQLETSLKRLQCPUVDLFYLHAPDHSAPVEETLRACHQLHQEGKFVELGLSNYAAWEVAEICTLCKSNGWILPTVYQGMYSATTRQVETELFPCLRHFGLRFYAYNPL 200
BLAST of FC868861 vs. ExPASy Swiss-Prot
Match: TAS_SHIFL (Protein tas OS=Shigella flexneri GN=tas PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.503e-11 Identity = 64/231 (27.71%), Postives = 101/231 (43.72%), Query Frame = 3 Query: 69 LEVSKLGFGCMNLSGGYSSPVSEEDGITMIKHAFSKGITFFDTADVYG-------QNANEVLLGKAL-KQLPREKILVATKF-GIAGIGDTDIIVKGSPDY--VRSCCEASLKRLDVDYIDLYYQHRVDK-----------------SVAIEETIGEMKKLVEEGKIKYIGLSEASPDTIRR------AHAVHPIAAVQMEWSLWTRDIEEDIIPLCRELGIGIXPFSPLG 659 LEVS LG G M + SE D + +A ++GI D A++Y Q E +G L K REK+++A+K G + D I + D +R SLKRL DY+DLY H + +V++ +T+ + + GKI+YIG+S + + R H + I +Q +SL R E + + + G+ + +S LG Sbjct: 11 LEVSTLGLGTMT----FGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLG 237
BLAST of FC868861 vs. ExPASy Swiss-Prot
Match: TAS_ECOLI (Protein tas OS=Escherichia coli (strain K12) GN=tas PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.503e-11 Identity = 64/231 (27.71%), Postives = 101/231 (43.72%), Query Frame = 3 Query: 69 LEVSKLGFGCMNLSGGYSSPVSEEDGITMIKHAFSKGITFFDTADVYG-------QNANEVLLGKAL-KQLPREKILVATKF-GIAGIGDTDIIVKGSPDY--VRSCCEASLKRLDVDYIDLYYQHRVDK-----------------SVAIEETIGEMKKLVEEGKIKYIGLSEASPDTIRR------AHAVHPIAAVQMEWSLWTRDIEEDIIPLCRELGIGIXPFSPLG 659 LEVS LG G M + SE D + +A ++GI D A++Y Q E +G L K REK+++A+K G + D I + D +R SLKRL DY+DLY H + +V++ +T+ + + GKI+YIG+S + + R H + I +Q +SL R E + + + G+ + +S LG Sbjct: 11 LEVSTLGLGTMT----FGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLG 237 The following BLAST results are available for this feature:
BLAST of FC868861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868861 ID=FC868861; Name=FC868861; organism=Citrus clementina; type=EST; length=659bpback to top |