FC868861

Overview
NameFC868861
Unique NameFC868861
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length659
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9491 contig Ccv1_Contig9491:89..747. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868861 vs. ExPASy Swiss-Prot
Match: Y1669_ARATH (Uncharacterized oxidoreductase At1g06690, chloroplastic OS=Arabidopsis thaliana GN=At1g06690 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.963e-11
Identity = 67/226 (29.65%), Postives = 109/226 (48.23%), Query Frame = 3
Query:   45 RVKLGTQGLEVSKLGFGCMNLS-GGYSSPVSEEDG-ITMIKHAFS----KGITFFDTADVYGQN------ANEVLLGKALKQ----LPREKILVATKFGIAGIGDTDIIVKGSPDYVRSCCEASLKRLDVDYIDLYYQHRVDKSVAIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAH-----AVHPIAAVQMEWSLWTRDIEE-DIIPLCRELGIGIXPFSPL 656
            +VKLG   L+V+KLG G  +     Y +    +D  +   K AF      GI FFDTA+VYG        ++E LLG+ +++     P  ++ VATKF         +  +   + V +  + SL RL++  +DLY  H        E  +  +   VE+G +K +G+S  S   +R A+        P+A+ Q+ +SL  R  E+  +   C ELG+ +  +SP+
Sbjct:   48 KVKLGGSDLKVTKLGIGVWSWGDNSYWNDFQWDDRKLKAAKGAFDTSLDNGIDFFDTAEVYGSKFSLGAISSETLLGRFIRERKERYPGAEVSVATKFAA-------LPWRFGRESVVTALKDSLSRLELSSVDLYQLH-WPGLWGNEGYLDGLGDAVEQGLVKAVGVSNYSEKRLRDAYERLKKRGIPLASNQVNYSLIYRAPEQTGVKAACDELGVTLIAYSPI 265          
BLAST of FC868861 vs. ExPASy Swiss-Prot
Match: YDHF_ECOLI (Oxidoreductase ydhF OS=Escherichia coli (strain K12) GN=ydhF PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.564e-11
Identity = 48/164 (29.27%), Postives = 77/164 (46.95%), Query Frame = 3
Query:   39 VPRVKLGTQGLEVSKLGFGCMNLSGGYSSPVSEEDGITMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLP--REKILVATKFGIAGIGDTDIIVKG---SPDYVRSCCEASLKRLDVDYIDLYYQHRVDKSVAIEETIGEMKKLVEEGKIKYIGLSEASP 515
            V R+ +  QG E S+   G   L       +S    ++ I+     G+T  D AD+YG    E   G+ALK  P  RE++ + +K GIA     + ++       D++    E SL  L  D++DL   HR D  +  +E     K L + GK+++ G+S  +P
Sbjct:    2 VQRITIAPQGPEFSRFVMGYWRLMDWN---MSARQLVSFIEEHLDLGVTTVDHADIYGGYQCEAAFGEALKLAPHLRERMEIVSKCGIATTAREENVIGHYITDRDHIIKSAEQSLINLATDHLDLLLIHRPDPLMDADEVADAFKHLHQSGKVRHFGVSNFTP 162          
BLAST of FC868861 vs. ExPASy Swiss-Prot
Match: ARK72_HUMAN (Aflatoxin B1 aldehyde reductase member 2 OS=Homo sapiens GN=AKR7A2 PE=1 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 4.374e-11
Identity = 56/196 (28.57%), Postives = 88/196 (44.90%), Query Frame = 3
Query:   93 GCMNLSGGYSSPVSEEDGITMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPRE--KILVATKFGIAGIGDTDIIVKGSPDYVRSCCEASLKRLDVDYIDLYYQHRVDKSVAIEETIGEMKKLVEEGKIKYIGLSE------ASPDTIRRAHAVHPIAAVQMEWSLWTRDIEEDIIPLCRELGIGIXPFSPL 656
            G M +     +P S       ++    +G T  DTA +Y    +E +LG     L     ++ +ATK   A   D   +    PD VRS  E SLKRL    +DL+Y H  D    +EET+   ++L +EGK   +GLS       A   T+ +++        Q  ++  TR +E ++ P  R  G+    ++PL
Sbjct:   43 GTMEMGRRMDAPASA----AAVRAFLERGHTELDTAFMYSDGQSETILGGLGLGLGGGDCRVKIATK---ANPWDGKSL---KPDSVRSQLETSLKRLQCPQVDLFYLHAPDHGTPVEETLHACQRLHQEGKFVELGLSNYASWEVAEICTLCKSNGWILPTVYQGMYNATTRQVETELFPCLRHFGLRFYAYNPL 228          
BLAST of FC868861 vs. ExPASy Swiss-Prot
Match: ARK73_HUMAN (Aflatoxin B1 aldehyde reductase member 3 OS=Homo sapiens GN=AKR7A3 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 7.461e-11
Identity = 58/197 (29.44%), Postives = 90/197 (45.69%), Query Frame = 3
Query:   93 GCMNLSGGYSSPVSEEDGITMIKHAF-SKGITFFDTADVYGQNANEVLLGKALKQLPRE--KILVATKFGIAGIGDTDIIVKGSPDYVRSCCEASLKRLDVDYIDLYYQHRVDKSVAIEETIGEMKKLVEEGKIKYIGLSE------ASPDTIRRAHAVHPIAAVQMEWSLWTRDIEEDIIPLCRELGIGIXPFSPL 656
            G M +     +P S       +  AF  +G T  DTA VY +  +E +LG    +L     ++ + TK  I   G++       PD +R   E SLKRL    +DL+Y H  D S  +EET+    +L +EGK   +GLS       A   T+ +++        Q  ++  TR +E ++ P  R  G+    F+PL
Sbjct:   15 GAMEMGRRMDAPTS-----AAVTRAFLERGHTEIDTAFVYSEGQSETILGGLGLRLGGSDCRVKIDTK-AIPLFGNSL-----KPDSLRFQLETSLKRLQCPRVDLFYLHMPDHSTPVEETLRACHQLHQEGKFVELGLSNYAAWEVAEICTLCKSNGWILPTVYQGMYNAITRQVETELFPCLRHFGLRFYAFNPL 200          
BLAST of FC868861 vs. ExPASy Swiss-Prot
Match: ARA2_YEAST (D-arabinose 1-dehydrogenase OS=Saccharomyces cerevisiae GN=ARA2 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.744e-11
Identity = 53/149 (35.57%), Postives = 73/149 (48.99%), Query Frame = 3
Query:   75 VSKLGFGCMNLSGGYSSPVSEEDGITMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQL----PREKILVATKFGIAGIGDTDIIVKGSPDYVRSCCEASLKRLDVDYIDLYYQHRVD--KSVAIEETIGEMKKLVEEGKIKYIGLS 503
            VS L  G   L+  Y+          +IK+AFS GI   DT+  YG +  EVL G+AL  L    PR+   + TK G  G  + +     S D+VR     S +RL   Y+DL Y H V+  K   I E + E++ L  +G IK  G+S
Sbjct:   14 VSPLVLGGAILNQQYTDEPESIPLEDIIKYAFSHGINAIDTSPYYGPS--EVLYGRALSNLRNEFPRDTYFICTKVGRIGAEEFNY----SRDFVRFSVHRSCERLHTTYLDLVYLHDVEFVKFPDILEALKELRTLKNKGVIKNFGIS 156          
The following BLAST results are available for this feature:
BLAST of FC868861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
Y1669_ARATH1.963e-1129.65Uncharacterized oxidoreductase At1g06690, chloropl... [more]
YDHF_ECOLI2.564e-1129.27Oxidoreductase ydhF OS=Escherichia coli (strain K1... [more]
ARK72_HUMAN4.374e-1128.57Aflatoxin B1 aldehyde reductase member 2 OS=Homo s... [more]
ARK73_HUMAN7.461e-1129.44Aflatoxin B1 aldehyde reductase member 3 OS=Homo s... [more]
ARA2_YEAST9.744e-1135.57D-arabinose 1-dehydrogenase OS=Saccharomyces cerev... [more]

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Properties
Property NameValue
Genbank descriptionC31005G03EF AbioticL1 Citrus clementina cDNA clone C31005G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868861 ID=FC868861; Name=FC868861; organism=Citrus clementina; type=EST; length=659bp
AAACAACTTCCTCAAATATGGCAGAAGAGAAACTCCAAGTTCCAAGAGTG
AAACTGGGTACCCAAGGCCTTGAGGTTTCAAAATTGGGTTTTGGATGCAT
GAACCTGAGCGGAGGTTATAGCTCTCCAGTCTCAGAAGAGGACGGCATAA
CAATGATAAAGCATGCTTTCAGTAAAGGAATCACTTTCTTTGATACTGCT
GATGTTTACGGACAAAATGCTAATGAAGTTCTTCTTGGAAAGGCCTTGAA
GCAGTTGCCTAGAGAAAAGATACTAGTAGCAACGAAGTTTGGGATTGCAG
GAATAGGAGATACTGATATCATCGTGAAGGGTTCCCCTGATTATGTGCGC
TCGTGTTGTGAAGCTAGCTTGAAGCGTCTTGATGTGGATTACATTGATCT
ATATTATCAACATAGAGTGGACAAATCAGTTGCTATAGAGGAAACGATTG
GTGAAATGAAGAAGCTAGTGGAAGAGGGTAAAATCAAGTACATTGGATTA
TCTGAGGCTAGTCCAGACACAATTAGGAGAGCACATGCTGTTCATCCCAT
TGCAGCTGTACAAATGGAATGGTCCCTCTGGACTCGTGATATTGAGGAAG
ATATAATACCACTTTGCAGGGAACTTGGCATTGGAATAGNTCCATTCAGT
CCTCTTGGT
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