FC868864
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868864 vs. ExPASy Swiss-Prot
Match: PPR53_ARATH (Pentatricopeptide repeat-containing protein At1g20230 OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 7.157e-36 Identity = 63/148 (42.57%), Postives = 96/148 (64.86%), Query Frame = -2 Query: 184 LREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVIQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 627 +R M++ GLKK S I+ + D+ +P ++ +K++ ++ E++ +G+ P+L ALHDVE++++E ML HSEKLAV FG++N +QV KNLR+C DCH+ +FIS R+I +RD NRFHHF+ G CSC D+W Sbjct: 613 IRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760 HSP 2 Score: 32.3426 bits (72), Expect = 7.157e-36 Identity = 14/24 (58.33%), Postives = 17/24 (70.83%), Query Frame = -3 Query: 627 EHTGYFVLMSNIYAASNKWREVGS 698 E+ G +VL+SNIYAA W EV S Sbjct: 589 ENPGTYVLLSNIYAAKGMWTEVDS 612
BLAST of FC868864 vs. ExPASy Swiss-Prot
Match: PP219_ARATH (Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 1.216e-35 Identity = 68/151 (45.03%), Postives = 98/151 (64.90%), Query Frame = -2 Query: 184 SGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVIQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 636 + ++R+ M KG+KK +S IE + F D+ +P ++Y K+E + E+++ G++P DVE+E++E +L YHSEKLAVA G+++ VI+V KNLRVC DCH + IS I RR+I+VRD NRFH F G+CSCNDYW Sbjct: 535 AAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685 HSP 2 Score: 23.8682 bits (50), Expect = 1.216e-35 Identity = 8/20 (40.00%), Postives = 13/20 (65.00%), Query Frame = -3 Query: 636 HTGYFVLMSNIYAASNKWRE 695 + G +V +SNIY+ +W E Sbjct: 515 NAGNYVQLSNIYSVGGRWDE 534
BLAST of FC868864 vs. ExPASy Swiss-Prot
Match: PPR68_ARATH (Pentatricopeptide repeat-containing protein At1g31920 OS=Arabidopsis thaliana GN=PCMP-H11 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.218e-35 Identity = 66/149 (44.30%), Postives = 102/149 (68.46%), Query Frame = -2 Query: 184 KLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVIQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 630 + R ++ KGLK+ FS++E F + DR +P KE+YK + M ++K GY PDL+ L +V++E+++ L HS+K+A+AFG++ P ++I++ +NLR+C+DCH+ + IS IY R+I+VRD NRFH F+GGTCSC DYW Sbjct: 458 RTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCSDCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606 HSP 2 Score: 21.9422 bits (45), Expect = 1.218e-35 Identity = 7/19 (36.84%), Postives = 13/19 (68.42%), Query Frame = -3 Query: 633 GYFVLMSNIYAASNKWREV 689 G ++L+SN+Y+ W +V Sbjct: 438 GDYLLISNLYSQGQMWDDV 456
BLAST of FC868864 vs. ExPASy Swiss-Prot
Match: PP206_ARATH (Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 5.925e-35 Identity = 63/148 (42.57%), Postives = 93/148 (62.84%), Query Frame = -2 Query: 184 LREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVIQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 627 +++ M+ +G+KK A+S +E I F + D+ +P E+ +K+ + EI+ GY PD S + DV+++ + L YHSE+LAVAF +++ I V KNLR C DCH+A + IS I +R+I VRD +RFHHF G CSC DYW Sbjct: 678 VKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825 HSP 2 Score: 28.4906 bits (62), Expect = 5.925e-35 Identity = 13/28 (46.43%), Postives = 19/28 (67.86%), Query Frame = -3 Query: 600 FVLMSNIYAASNKWREVGS*EKI*KIRG 683 +V MSNIYAA+ +W +V +K + RG Sbjct: 659 YVSMSNIYAAAGEWEKVRDVKKAMRERG 686
BLAST of FC868864 vs. ExPASy Swiss-Prot
Match: PP406_ARATH (Pentatricopeptide repeat-containing protein At5g39680 OS=Arabidopsis thaliana GN=EMB2744 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 6.422e-35 Identity = 70/149 (46.98%), Postives = 97/149 (65.10%), Query Frame = -2 Query: 184 KLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVIQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 630 K+R M N+G+KK S I F D +P +Y KV+ + +IK GY PD++ A HDV++E RE L+YHSEKLAVA+G++ ++ + VTKN+R+C+DCHSA + IS I +R I++RD+NRFHHF G CSC DYW Sbjct: 562 KVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710
BLAST of FC868864 vs. ExPASy Swiss-Prot
Match: PP353_ARATH (Pentatricopeptide repeat-containing protein At4g37170 OS=Arabidopsis thaliana GN=PCMP-H5 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 7.733e-35 Identity = 70/150 (46.67%), Postives = 92/150 (61.33%), Query Frame = -2 Query: 184 GKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVIQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 633 GK+R+ M+ G+ K S E + F AD +P + ++ + + + ++K GY+P S LHDVEDE +E L YHSEKLAVAF I++ I+V KNLR C DCH A +FIS I +RKI VRD+ RFH FE G CSC DYW Sbjct: 542 GKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691 HSP 2 Score: 29.261 bits (64), Expect = 7.733e-35 Identity = 12/22 (54.55%), Postives = 15/22 (68.18%), Query Frame = -3 Query: 618 FVLMSNIYAASNKWREVGS*EK 683 +V M+NIYAA+ KW E G K Sbjct: 525 YVTMANIYAAAGKWEEEGKMRK 546
BLAST of FC868864 vs. ExPASy Swiss-Prot
Match: PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290 OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 8.388e-35 Identity = 70/170 (41.18%), Postives = 105/170 (61.76%), Query Frame = -2 Query: 184 YWIFCANVKYIRCIKQMARSGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVIQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 693 Y + AN+ R + G++R M +GL+K S++E ++ F + +P K++Y +E + IK AGY+PD + L VE++ +E +L+ HSEKLA++FG++N T I V KNLRVC DCH+A ++IS + R+I+VRD RFHHF+ G CSC DYW Sbjct: 643 YHVLLANI--YRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
BLAST of FC868864 vs. ExPASy Swiss-Prot
Match: PP373_ARATH (Putative pentatricopeptide repeat-containing protein At5g09950 OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.003e-34 Identity = 68/150 (45.33%), Postives = 102/150 (68.00%), Query Frame = -2 Query: 184 KLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAV-IQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 630 K R+ MK+ +KK A +S + + F D+ +P +YKK++ + +++ AGY+P AL+D+E E++E +L+YHSEKLAVAF + + I++ KNLRVC DCHSAF++IS I R+II+RD+NRFHHF+ G CSC+D+W Sbjct: 846 KARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995 HSP 2 Score: 24.6386 bits (52), Expect = 1.003e-34 Identity = 8/22 (36.36%), Postives = 15/22 (68.18%), Query Frame = -3 Query: 633 EHTGYFVLMSNIYAASNKWREV 698 E+ +VL+ N+YAA +W ++ Sbjct: 823 ENAVNYVLLGNMYAAGGRWEDL 844
BLAST of FC868864 vs. ExPASy Swiss-Prot
Match: PP425_ARATH (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 1.008e-34 Identity = 63/149 (42.28%), Postives = 101/149 (67.79%), Query Frame = -2 Query: 184 KLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVIQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 630 ++R MK K ++K S+I+ + F D +P KE+ + ++ ++++AGY P + L ++E+ED+E++L+YHSEK+A AFG+++ +P I++ KNLR+C DCHS+ + IS +Y+RKI VRD RFHHF+ G+CSC DYW Sbjct: 498 EMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646 HSP 2 Score: 25.7942 bits (55), Expect = 1.008e-34 Identity = 9/20 (45.00%), Postives = 14/20 (70.00%), Query Frame = -3 Query: 633 TGYFVLMSNIYAASNKWREV 692 +G +V +SN+YA+ W EV Sbjct: 477 SGAYVALSNMYASQGNWSEV 496
BLAST of FC868864 vs. ExPASy Swiss-Prot
Match: PP307_ARATH (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2) HSP 1 Score: 140.198 bits (352), Expect = 1.305e-34 Identity = 64/147 (43.54%), Postives = 93/147 (63.27%), Query Frame = -2 Query: 184 REDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVIQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 624 R+ MK KG+KK S IE I F+ D+ +P E+++ + + GY+ D L++++ E ++ ++ HSEKLA++FG+++L I V KNLRVCNDCH+ +F+S + R+IIVRDA RFHHFEGG CSC DYW Sbjct: 918 RQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064 HSP 2 Score: 27.335 bits (59), Expect = 1.305e-34 Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = -3 Query: 642 EHTGYFVLMSNIYAASNKW 698 E + +VL+SN+YA S KW Sbjct: 893 EDSATYVLLSNLYAVSKKW 911 The following BLAST results are available for this feature:
BLAST of FC868864 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 87
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868864 ID=FC868864; Name=FC868864; organism=Citrus clementina; type=EST; length=700bpback to top |