FC868864
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868864 vs. ExPASy Swiss-Prot
Match: PP147_ARATH (Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.845e-33 Identity = 64/149 (42.95%), Postives = 90/149 (60.40%), Query Frame = -2 Query: 184 KLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVIQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 630 ++R M+++G+KK S IE K I F D +P EV KK+ + + GY+P+ + L D+E E E L +HSEKLA+AFG+M L E VI++ KNLR+C DCH + S + R I++RD R+HHF+ G CSC DYW Sbjct: 482 EIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630 HSP 2 Score: 28.4906 bits (62), Expect = 1.845e-33 Identity = 12/22 (54.55%), Postives = 14/22 (63.64%), Query Frame = -3 Query: 633 EHTGYFVLMSNIYAASNKWREV 698 E G + L+SNIYA S KW V Sbjct: 459 EDAGTYTLLSNIYANSQKWDSV 480
BLAST of FC868864 vs. ExPASy Swiss-Prot
Match: PP386_ARATH (Pentatricopeptide repeat-containing protein At5g15340, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H91 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 1.845e-33 Identity = 66/150 (44.00%), Postives = 95/150 (63.33%), Query Frame = -2 Query: 184 LREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVED--EDREHMLNYHSEKLAVAFGIMNLTPEAVIQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 627 LR ++ +G++K S I + F + DR +P KE+Y K+ + I+ AGY+PD+S + E E++E L HSEKLAV FG++ P + V KNLR+C DCHSA + +S +Y R+II+RD NRFH F+GG+CSC+DYW Sbjct: 474 LRGSLRKRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGLVSHSEGDLEEKEQALCCHSEKLAVCFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIRDRNRFHQFKGGSCSCSDYW 623 HSP 2 Score: 21.557 bits (44), Expect = 1.845e-33 Identity = 8/17 (47.06%), Postives = 12/17 (70.59%), Query Frame = -3 Query: 645 HTGYFVLMSNIYAASNK 695 +T Y +LMSN+Y A + Sbjct: 451 NTEYQILMSNMYVAEGR 467
BLAST of FC868864 vs. ExPASy Swiss-Prot
Match: PP108_ARATH (Putative pentatricopeptide repeat-containing protein At1g68930 OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.123e-33 Identity = 68/149 (45.64%), Postives = 95/149 (63.76%), Query Frame = -2 Query: 184 KLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVIQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 630 +LR M+ K +KK S I++ + F D +PY ++Y K+E + +I GY PD S HDVE+ + MLNYHSE+LA+AFG++ + I+V KNLRVC DCH+A + IS + R+I+VRDA RFH F+ GTCSC D+W Sbjct: 595 QLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743 HSP 2 Score: 24.6386 bits (52), Expect = 3.123e-33 Identity = 9/21 (42.86%), Postives = 13/21 (61.90%), Query Frame = -3 Query: 633 HTGYFVLMSNIYAASNKWREV 695 H + L+S+IYA+ KW V Sbjct: 573 HPAGYTLLSSIYASKGKWDSV 593
BLAST of FC868864 vs. ExPASy Swiss-Prot
Match: PP122_ARATH (Pentatricopeptide repeat-containing protein At1g74630 OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 3.128e-33 Identity = 61/149 (40.94%), Postives = 100/149 (67.11%), Query Frame = -2 Query: 184 LREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIK-MAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVIQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 627 +R+ M + +KK A+S++E GK + F ++ E ++K++ + + +K AGY P+++ AL+DVE+E++E ++ HSEKLA+AF + L+ A I++ KNLR+C DCH+ + S +Y +I+VRD NRFH F+ G+CSC DYW Sbjct: 495 IRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643 HSP 2 Score: 29.6462 bits (65), Expect = 3.128e-33 Identity = 12/26 (46.15%), Postives = 18/26 (69.23%), Query Frame = -3 Query: 618 HTGYFVLMSNIYAASNKWREVGS*EK 695 ++G VL+SN YA + KW++V S K Sbjct: 472 NSGDLVLLSNAYATAGKWKDVASIRK 497
BLAST of FC868864 vs. ExPASy Swiss-Prot
Match: PP354_ARATH (Pentatricopeptide repeat-containing protein At4g37380, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.524e-33 Identity = 63/149 (42.28%), Postives = 95/149 (63.76%), Query Frame = -2 Query: 184 KLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVIQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 630 K+R MK KG+ K S IE + F DR + KE+Y + ++ IK GY+P+ + L D+E+ ++E L HSE+LA+A+G+++ P + +++ KNLRVC+DCH+ + IS I RKI++RD NRFHHF G+CSC D+W Sbjct: 484 KVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
BLAST of FC868864 vs. ExPASy Swiss-Prot
Match: PP249_ARATH (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.060e-33 Identity = 61/149 (40.94%), Postives = 93/149 (62.42%), Query Frame = -2 Query: 184 KLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVIQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 630 K+R MK KGL+KP S I+ F + D +P + ++ ++ G++PDLS L DV+++++ ML+ HSEKLA+A+G+++ I++ KNLRVC+DCHS +F S +Y R+II+RD NRFH+ G CSC D+W Sbjct: 694 KVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842 HSP 2 Score: 31.187 bits (69), Expect = 4.060e-33 Identity = 10/22 (45.45%), Postives = 18/22 (81.82%), Query Frame = -3 Query: 633 EHTGYFVLMSNIYAASNKWREV 698 E TG +VL+SN+YA++ +W ++ Sbjct: 671 ERTGSYVLLSNVYASAGRWNDM 692
BLAST of FC868864 vs. ExPASy Swiss-Prot
Match: PP410_ARATH (Putative pentatricopeptide repeat-containing protein At5g40405 OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.011e-33 Identity = 62/148 (41.89%), Postives = 97/148 (65.54%), Query Frame = -2 Query: 184 LREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVIQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 627 +R+ MK+KG++K SV+E ++ F D+ +P + ++ + ++ +++AGY D + + D+++E++E L HSEK A+AFGIM+L + I++ KNLRVC DCH IS I+ R+IIVRD NRFHHF+ G CSCN +W Sbjct: 465 VRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGHCSCNGFW 612
BLAST of FC868864 vs. ExPASy Swiss-Prot
Match: PP296_ARATH (Pentatricopeptide repeat-containing protein At3g63370 OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 8.954e-33 Identity = 61/150 (40.67%), Postives = 97/150 (64.67%), Query Frame = -2 Query: 184 KLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKM-AGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVIQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 630 K+R MK G++K S IE + F D+ +P KE+Y+K+ + +++ GY+ D LH+V++ ++ ML+ HSE++A+A+G++ A +++TKNLRVC DCH+ + +S ++RR I++RDANRFHHFE G CSC D W Sbjct: 811 KVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLRITKNLRVCRDCHTFCKLVSKLFRRDIVMRDANRFHHFESGLCSCGDSW 960 HSP 2 Score: 24.6386 bits (52), Expect = 8.954e-33 Identity = 8/22 (36.36%), Postives = 15/22 (68.18%), Query Frame = -3 Query: 633 EHTGYFVLMSNIYAASNKWREV 698 ++ G VL+SN++A +W +V Sbjct: 788 KNPGNLVLVSNVFAEQGRWNDV 809
BLAST of FC868864 vs. ExPASy Swiss-Prot
Match: PPR85_ARATH (Pentatricopeptide repeat-containing protein At1g59720, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H51 PE=2 SV=2) HSP 1 Score: 131.724 bits (330), Expect = 9.000e-33 Identity = 63/152 (41.45%), Postives = 94/152 (61.84%), Query Frame = -2 Query: 184 GKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCA--LHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVIQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 633 G +R+ M G++K S IE F D +P K++Y++++ + ++ GY+PD S A + D +E+ L HSE+LA+AFG++NL P+ I++ KNLRVCNDCH + IS ++ +IIVRD RFHHF+ G+CSC DYW Sbjct: 487 GIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638 HSP 2 Score: 29.6462 bits (65), Expect = 9.000e-33 Identity = 10/26 (38.46%), Postives = 20/26 (76.92%), Query Frame = -3 Query: 615 TGYFVLMSNIYAASNKWREVGS*EKI 692 +G +VL+S +YA++++W +VG K+ Sbjct: 467 SGAYVLLSRVYASASRWNDVGIVRKL 492
BLAST of FC868864 vs. ExPASy Swiss-Prot
Match: PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.025e-32 Identity = 69/150 (46.00%), Postives = 96/150 (64.00%), Query Frame = -2 Query: 184 KLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDED-REHMLNYHSEKLAVAFGIMNLTPEAVIQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 630 +LR+ M+ GLKK S IE I F + D +P ++VY K+ + ++K GY P++S L +E+E+ +E LN HSEKLA+ +G+++ VI+V KNLRVC DCHS + IS +Y R+IIVRD RFHHF G CSCND+W Sbjct: 589 ELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738 The following BLAST results are available for this feature:
BLAST of FC868864 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 87
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868864 ID=FC868864; Name=FC868864; organism=Citrus clementina; type=EST; length=700bpback to top |