FC868865 | Citrus Genome Database

Overview


Name	FC868865
Unique Name	FC868865
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	672

Libraries


Library Name	Type
AbioticL1	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

BLAST of FC868865 vs. ExPASy Swiss-Prot
Match: ENO_SALPC (Enolase OS=Salmonella paratyphi C (strain RKS4594) GN=eno PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 2.948e-44
Identity = 104/184 (56.52%), Postives = 119/184 (64.67%), Query Frame = 3

Query:   87 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNK-NLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFXE 632
            I  V  R+I DSRGNPTVE +V    G V  AA PSGASTG  EALELRDG  S +LGKGV+KAV  VN  I  A+ GKD  +Q  ID  M+  LDGT N     K   GANAILAVSLA  KA A  K +PLY+HIAEL+G      +PVP  N+INGG HA N + +QEFMI PVGA +  E
Sbjct:    4 IVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMI-DLDGTEN-----KSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKE 181

HSP 2 Score: 23.0978 bits (48), Expect = 2.948e-44
Identity = 8/12 (66.67%), Postives = 11/12 (91.67%), Query Frame = 2

Query:  632 AMKMGVEVYHHL 667
            A++MG EV+HHL
Sbjct:  182 AIRMGSEVFHHL 193

BLAST of FC868865 vs. ExPASy Swiss-Prot
Match: ENO_SALPB (Enolase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=eno PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 2.948e-44
Identity = 104/184 (56.52%), Postives = 119/184 (64.67%), Query Frame = 3

Query:   87 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNK-NLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFXE 632
            I  V  R+I DSRGNPTVE +V    G V  AA PSGASTG  EALELRDG  S +LGKGV+KAV  VN  I  A+ GKD  +Q  ID  M+  LDGT N     K   GANAILAVSLA  KA A  K +PLY+HIAEL+G      +PVP  N+INGG HA N + +QEFMI PVGA +  E
Sbjct:    4 IVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMI-DLDGTEN-----KSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKE 181

HSP 2 Score: 23.0978 bits (48), Expect = 2.948e-44
Identity = 8/12 (66.67%), Postives = 11/12 (91.67%), Query Frame = 2

Query:  632 AMKMGVEVYHHL 667
            A++MG EV+HHL
Sbjct:  182 AIRMGSEVFHHL 193

BLAST of FC868865 vs. ExPASy Swiss-Prot
Match: ENO_SALPA (Enolase OS=Salmonella paratyphi A GN=eno PE=3 SV=3)

HSP 1 Score: 176.792 bits (447), Expect = 2.948e-44
Identity = 104/184 (56.52%), Postives = 119/184 (64.67%), Query Frame = 3

Query:   87 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNK-NLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFXE 632
            I  V  R+I DSRGNPTVE +V    G V  AA PSGASTG  EALELRDG  S +LGKGV+KAV  VN  I  A+ GKD  +Q  ID  M+  LDGT N     K   GANAILAVSLA  KA A  K +PLY+HIAEL+G      +PVP  N+INGG HA N + +QEFMI PVGA +  E
Sbjct:    4 IVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMI-DLDGTEN-----KSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKE 181

HSP 2 Score: 23.0978 bits (48), Expect = 2.948e-44
Identity = 8/12 (66.67%), Postives = 11/12 (91.67%), Query Frame = 2

Query:  632 AMKMGVEVYHHL 667
            A++MG EV+HHL
Sbjct:  182 AIRMGSEVFHHL 193

BLAST of FC868865 vs. ExPASy Swiss-Prot
Match: ENO_SALNS (Enolase OS=Salmonella newport (strain SL254) GN=eno PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 2.948e-44
Identity = 104/184 (56.52%), Postives = 119/184 (64.67%), Query Frame = 3

Query:   87 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNK-NLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFXE 632
            I  V  R+I DSRGNPTVE +V    G V  AA PSGASTG  EALELRDG  S +LGKGV+KAV  VN  I  A+ GKD  +Q  ID  M+  LDGT N     K   GANAILAVSLA  KA A  K +PLY+HIAEL+G      +PVP  N+INGG HA N + +QEFMI PVGA +  E
Sbjct:    4 IVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMI-DLDGTEN-----KSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKE 181

HSP 2 Score: 23.0978 bits (48), Expect = 2.948e-44
Identity = 8/12 (66.67%), Postives = 11/12 (91.67%), Query Frame = 2

Query:  632 AMKMGVEVYHHL 667
            A++MG EV+HHL
Sbjct:  182 AIRMGSEVFHHL 193

BLAST of FC868865 vs. ExPASy Swiss-Prot
Match: ENO_SALHS (Enolase OS=Salmonella heidelberg (strain SL476) GN=eno PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 2.948e-44
Identity = 104/184 (56.52%), Postives = 119/184 (64.67%), Query Frame = 3

Query:   87 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNK-NLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFXE 632
            I  V  R+I DSRGNPTVE +V    G V  AA PSGASTG  EALELRDG  S +LGKGV+KAV  VN  I  A+ GKD  +Q  ID  M+  LDGT N     K   GANAILAVSLA  KA A  K +PLY+HIAEL+G      +PVP  N+INGG HA N + +QEFMI PVGA +  E
Sbjct:    4 IVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMI-DLDGTEN-----KSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKE 181

HSP 2 Score: 23.0978 bits (48), Expect = 2.948e-44
Identity = 8/12 (66.67%), Postives = 11/12 (91.67%), Query Frame = 2

Query:  632 AMKMGVEVYHHL 667
            A++MG EV+HHL
Sbjct:  182 AIRMGSEVFHHL 193

BLAST of FC868865 vs. ExPASy Swiss-Prot
Match: ENO_SALG2 (Enolase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=eno PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 2.948e-44
Identity = 104/184 (56.52%), Postives = 119/184 (64.67%), Query Frame = 3

Query:   87 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNK-NLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFXE 632
            I  V  R+I DSRGNPTVE +V    G V  AA PSGASTG  EALELRDG  S +LGKGV+KAV  VN  I  A+ GKD  +Q  ID  M+  LDGT N     K   GANAILAVSLA  KA A  K +PLY+HIAEL+G      +PVP  N+INGG HA N + +QEFMI PVGA +  E
Sbjct:    4 IVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMI-DLDGTEN-----KSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKE 181

HSP 2 Score: 23.0978 bits (48), Expect = 2.948e-44
Identity = 8/12 (66.67%), Postives = 11/12 (91.67%), Query Frame = 2

Query:  632 AMKMGVEVYHHL 667
            A++MG EV+HHL
Sbjct:  182 AIRMGSEVFHHL 193

BLAST of FC868865 vs. ExPASy Swiss-Prot
Match: ENO_SALEP (Enolase OS=Salmonella enteritidis PT4 (strain P125109) GN=eno PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 2.948e-44
Identity = 104/184 (56.52%), Postives = 119/184 (64.67%), Query Frame = 3

Query:   87 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNK-NLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFXE 632
            I  V  R+I DSRGNPTVE +V    G V  AA PSGASTG  EALELRDG  S +LGKGV+KAV  VN  I  A+ GKD  +Q  ID  M+  LDGT N     K   GANAILAVSLA  KA A  K +PLY+HIAEL+G      +PVP  N+INGG HA N + +QEFMI PVGA +  E
Sbjct:    4 IVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMI-DLDGTEN-----KSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKE 181

HSP 2 Score: 23.0978 bits (48), Expect = 2.948e-44
Identity = 8/12 (66.67%), Postives = 11/12 (91.67%), Query Frame = 2

Query:  632 AMKMGVEVYHHL 667
            A++MG EV+HHL
Sbjct:  182 AIRMGSEVFHHL 193

BLAST of FC868865 vs. ExPASy Swiss-Prot
Match: ENO_SALDC (Enolase OS=Salmonella dublin (strain CT_02021853) GN=eno PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 2.948e-44
Identity = 104/184 (56.52%), Postives = 119/184 (64.67%), Query Frame = 3

Query:   87 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNK-NLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFXE 632
            I  V  R+I DSRGNPTVE +V    G V  AA PSGASTG  EALELRDG  S +LGKGV+KAV  VN  I  A+ GKD  +Q  ID  M+  LDGT N     K   GANAILAVSLA  KA A  K +PLY+HIAEL+G      +PVP  N+INGG HA N + +QEFMI PVGA +  E
Sbjct:    4 IVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMI-DLDGTEN-----KSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKE 181

HSP 2 Score: 23.0978 bits (48), Expect = 2.948e-44
Identity = 8/12 (66.67%), Postives = 11/12 (91.67%), Query Frame = 2

Query:  632 AMKMGVEVYHHL 667
            A++MG EV+HHL
Sbjct:  182 AIRMGSEVFHHL 193

BLAST of FC868865 vs. ExPASy Swiss-Prot
Match: ENO_SALCH (Enolase OS=Salmonella choleraesuis GN=eno PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 2.948e-44
Identity = 104/184 (56.52%), Postives = 119/184 (64.67%), Query Frame = 3

Query:   87 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNK-NLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFXE 632
            I  V  R+I DSRGNPTVE +V    G V  AA PSGASTG  EALELRDG  S +LGKGV+KAV  VN  I  A+ GKD  +Q  ID  M+  LDGT N     K   GANAILAVSLA  KA A  K +PLY+HIAEL+G      +PVP  N+INGG HA N + +QEFMI PVGA +  E
Sbjct:    4 IVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMI-DLDGTEN-----KSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKE 181

HSP 2 Score: 23.0978 bits (48), Expect = 2.948e-44
Identity = 8/12 (66.67%), Postives = 11/12 (91.67%), Query Frame = 2

Query:  632 AMKMGVEVYHHL 667
            A++MG EV+HHL
Sbjct:  182 AIRMGSEVFHHL 193

BLAST of FC868865 vs. ExPASy Swiss-Prot
Match: ENO_SALAR (Enolase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=eno PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 2.948e-44
Identity = 104/184 (56.52%), Postives = 119/184 (64.67%), Query Frame = 3

Query:   87 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNK-NLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFXE 632
            I  V  R+I DSRGNPTVE +V    G V  AA PSGASTG  EALELRDG  S +LGKGV+KAV  VN  I  A+ GKD  +Q  ID  M+  LDGT N     K   GANAILAVSLA  KA A  K +PLY+HIAEL+G      +PVP  N+INGG HA N + +QEFMI PVGA +  E
Sbjct:    4 IVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMI-DLDGTEN-----KSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKE 181

HSP 2 Score: 23.0978 bits (48), Expect = 2.948e-44
Identity = 8/12 (66.67%), Postives = 11/12 (91.67%), Query Frame = 2

Query:  632 AMKMGVEVYHHL 667
            A++MG EV+HHL
Sbjct:  182 AIRMGSEVFHHL 193

The following BLAST results are available for this feature:

BLAST of FC868865 vs. ExPASy Swiss-Prot

BLAST of FC868865 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500


Match Name	E-value	Identity	Description
ENO_SALPC	2.948e-44	56.52	Enolase OS=Salmonella paratyphi C (strain RKS4594)...	[more]
ENO_SALPB	2.948e-44	56.52	Enolase OS=Salmonella paratyphi B (strain ATCC BAA...	[more]
ENO_SALPA	2.948e-44	56.52	Enolase OS=Salmonella paratyphi A GN=eno PE=3 SV=3	[more]
ENO_SALNS	2.948e-44	56.52	Enolase OS=Salmonella newport (strain SL254) GN=en...	[more]
ENO_SALHS	2.948e-44	56.52	Enolase OS=Salmonella heidelberg (strain SL476) GN...	[more]
ENO_SALG2	2.948e-44	56.52	Enolase OS=Salmonella gallinarum (strain 287/91 / ...	[more]
ENO_SALEP	2.948e-44	56.52	Enolase OS=Salmonella enteritidis PT4 (strain P125...	[more]
ENO_SALDC	2.948e-44	56.52	Enolase OS=Salmonella dublin (strain CT_02021853) ...	[more]
ENO_SALCH	2.948e-44	56.52	Enolase OS=Salmonella choleraesuis GN=eno PE=3 SV=...	[more]
ENO_SALAR	2.948e-44	56.52	Enolase OS=Salmonella arizonae (strain ATCC BAA-73...	[more]

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Properties


Property Name	Value
Genbank description	C31005G07EF AbioticL1 Citrus clementina cDNA clone C31005G07, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FC868865 ID=FC868865; Name=FC868865; organism=Citrus clementina; type=EST; length=672bp
GAAAAGGCTCTTGTCGCACTCACTCACTCTCTCTCTCGTTCTAGATCTTT
CTTCGCTTTTCCAGCTTTCAGAAAATGGCAATAACCATCACTGCCGTCAA
AGCCAGGCAGATCTTTGACAGCCGTGGAAATCCAACGGTGGAGGTCGACG
TGACAACATCAGATGGCCACGTGGCTAGAGCTGCTGTTCCAAGCGGTGCA
TCCACCGGAATTTATGAGGCGCTTGAACTAAGAGACGGAGGCTCTGATTA
CCTAGGCAAGGGTGTATCGAAGGCTGTTAGCAATGTCAACGCCATCATTG
GCCCTGCACTCGCTGGCAAGGACCCAACTGAGCAGACTGCTATTGACAAC
TATATGGTACAACAACTTGATGGAACTGTAAATGAGTGGGGTTGGTGCAA
ACAGAAGCTTGGAGCAAACGCCATTTTGGCTGTCTCCCTAGCTGTCTGCA
AGGCTGGTGCACATGTCAAGAAGATTCCTCTTTACAAGCATATTGCCGAA
CTCTCTGGTAACAAGAATTTGGTGTTGCCAGTGCCAGCATTCAATGTCAT
TAATGGTGGATCACATGCTGGAAACAAACTTGCTATGCAGGAGTTTATGA
TTCTTCCTGTAGGAGCTTCCTCTTTCNAAGAGCCATGAAGATGGGTGTAG
AAGTATATCACCATCTGAAGGC