FC868868
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868868 vs. ExPASy Swiss-Prot
Match: PDK3_MOUSE ([Pyruvate dehydrogenase [lipoamide]] kinase isozyme 3, mitochondrial OS=Mus musculus GN=Pdk3 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.380e-16 Identity = 56/159 (35.22%), Postives = 88/159 (55.35%), Query Frame = 3 Query: 90 EEVGRWGCMKQTGVSLRYMMEFGSKPTDKNLLISAQFLHKELPIRIARRAIELETLPYGLSEKPAVLKVRDWYLDSFRDLRSFPDIRSTSDER---DFTQMIKAIKVRHNNVVPMMALGLQQLKKE--MDPKIVYEDLHEIHQFLDRFYMSRIGIRMLI 551 +++ R+ + +S++ ++FG + S FL KELP+R+A E+ LP L +P+V V+ WY+ SF +L + + +S D R +F ++ I+ RHN+VVP MA G+ + K++ DP I I FLDRFY +RI RMLI Sbjct: 14 KQIERYSRFSPSPLSIKQFLDFGRDNACEKT--SYMFLRKELPVRLANTMREVNLLPDNLLNRPSVGLVQSWYMQSFLELLEYEN-KSPEDPRVLDNFLNVLINIRNRHNDVVPTMAQGVIEYKEKFGFDPFI----SSNIQYFLDRFYTNRISFRMLI 165
BLAST of FC868868 vs. ExPASy Swiss-Prot
Match: PDK3_HUMAN ([Pyruvate dehydrogenase [lipoamide]] kinase isozyme 3, mitochondrial OS=Homo sapiens GN=PDK3 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.380e-16 Identity = 55/159 (34.59%), Postives = 89/159 (55.97%), Query Frame = 3 Query: 90 EEVGRWGCMKQTGVSLRYMMEFGSKPTDKNLLISAQFLHKELPIRIARRAIELETLPYGLSEKPAVLKVRDWYLDSFRDLRSFPDIRSTSDER---DFTQMIKAIKVRHNNVVPMMALGLQQLKKE--MDPKIVYEDLHEIHQFLDRFYMSRIGIRMLI 551 +++ R+ + +S++ ++FG + S FL KELP+R+A E+ LP L +P+V V+ WY+ SF +L + + +S D + +F Q++ ++ RHN+VVP MA G+ + K++ DP I I FLDRFY +RI RMLI Sbjct: 14 KQIERYSRFSPSPLSIKQFLDFGRDNACEKT--SYMFLRKELPVRLANTMREVNLLPDNLLNRPSVGLVQSWYMQSFLELLEYEN-KSPEDPQVLDNFLQVLIKVRNRHNDVVPTMAQGVIEYKEKFGFDPFI----STNIQYFLDRFYTNRISFRMLI 165
BLAST of FC868868 vs. ExPASy Swiss-Prot
Match: PDK2_RAT ([Pyruvate dehydrogenase [lipoamide]] kinase isozyme 2, mitochondrial OS=Rattus norvegicus GN=Pdk2 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.109e-16 Identity = 55/144 (38.19%), Postives = 77/144 (53.47%), Query Frame = 3 Query: 129 VSLRYMMEFGSKPTDKNLLISAQFLHKELPIRIARRAIELETLPYGLSEKPAVLKVRDWYLDSFRDLRSFPDIRSTSDER---DFTQMIKAIKVRHNNVVPMMALGLQQLKKEMDPKIVYEDLHEIHQFLDRFYMSRIGIRMLI 551 +S++ ++FGS + S FL +ELP+R+A E+ LP + P+V V+ WY+ S D+ F D + D R FT + I+ RHN+VVP MA G+ + K V I FLDRFY+SRI IRMLI Sbjct: 31 LSMKQFLDFGSSNACEKT--SFTFLRQELPVRLANIMKEINLLPDRVLSTPSVQLVQSWYVQSLLDIMEFLD-KDPEDHRTLSQFTDALVTIRNRHNDVVPTMAQGVLEYKDTYGDDPVSN--QNIQYFLDRFYLSRISIRMLI 169
BLAST of FC868868 vs. ExPASy Swiss-Prot
Match: PDK2_HUMAN ([Pyruvate dehydrogenase [lipoamide]] kinase isozyme 2, mitochondrial OS=Homo sapiens GN=PDK2 PE=1 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 3.109e-16 Identity = 55/144 (38.19%), Postives = 77/144 (53.47%), Query Frame = 3 Query: 129 VSLRYMMEFGSKPTDKNLLISAQFLHKELPIRIARRAIELETLPYGLSEKPAVLKVRDWYLDSFRDLRSFPDIRSTSDER---DFTQMIKAIKVRHNNVVPMMALGLQQLKKEMDPKIVYEDLHEIHQFLDRFYMSRIGIRMLI 551 +S++ ++FGS + S FL +ELP+R+A E+ LP + P+V V+ WY+ S D+ F D + D R FT + I+ RHN+VVP MA G+ + K V I FLDRFY+SRI IRMLI Sbjct: 31 LSMKQFLDFGSSNACEKT--SFTFLRQELPVRLANIMKEINLLPDRVLSTPSVQLVQSWYVQSLLDIMEFLD-KDPEDHRTLSQFTDALVTIRNRHNDVVPTMAQGVLEYKDTYGDDPVSN--QNIQYFLDRFYLSRISIRMLI 169
BLAST of FC868868 vs. ExPASy Swiss-Prot
Match: PDK2_MOUSE ([Pyruvate dehydrogenase [lipoamide]] kinase isozyme 2, mitochondrial OS=Mus musculus GN=Pdk2 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.303e-16 Identity = 55/144 (38.19%), Postives = 77/144 (53.47%), Query Frame = 3 Query: 129 VSLRYMMEFGSKPTDKNLLISAQFLHKELPIRIARRAIELETLPYGLSEKPAVLKVRDWYLDSFRDLRSFPDIRSTSDER---DFTQMIKAIKVRHNNVVPMMALGLQQLKKEMDPKIVYEDLHEIHQFLDRFYMSRIGIRMLI 551 +S++ ++FGS + S FL +ELP+R+A E+ LP + P+V V+ WY+ S D+ F D + D R FT + I+ RHN+VVP MA G+ + K V I FLDRFY+SRI IRMLI Sbjct: 31 LSMKQFLDFGSSNACEKT--SFTFLRQELPVRLANIMKEINLLPDRVLGTPSVQLVQSWYVQSLLDIMEFLD-KDPEDHRTLSQFTDALVTIRNRHNDVVPTMAQGVLEYKDTYGDDPVSN--QNIQYFLDRFYLSRISIRMLI 169
BLAST of FC868868 vs. ExPASy Swiss-Prot
Match: PDK4_RHIFE ([Pyruvate dehydrogenase [lipoamide]] kinase isozyme 4, mitochondrial OS=Rhinolophus ferrumequinum GN=PDK4 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.046e-16 Identity = 53/156 (33.97%), Postives = 85/156 (54.49%), Query Frame = 3 Query: 93 EVGRWGCMKQTGVSLRYMMEFGSKPTDKNLLISAQFLHKELPIRIARRAIELETLPYGLSEKPAVLKVRDWYLDSFRDLRSFPDIRSTSDER---DFTQMIKAIKVRHNNVVPMMALGLQQLKKEMDPKIVYEDLHEIHQFLDRFYMSRIGIRMLI 551 EV + + +S++ +++FGS+ + S+ FL +ELP+R+A E++ LP L +V V+ WY+ S +L F + RS D++ DF + ++ RH+NVVP MA G+ + K V + FLDRFYM+RI RML+ Sbjct: 23 EVEHFSRYSPSPLSMKQLLDFGSENACERT--SSAFLRQELPVRLANILKEIDILPDRLVNTSSVQLVKSWYIQSLMELVEFHE-RSPDDQKVLSDFVDTLITVRNRHHNVVPTMAQGIIEYKDSCTVDPVTN--QNLQYFLDRFYMNRISTRMLM 173
BLAST of FC868868 vs. ExPASy Swiss-Prot
Match: PDK4_HUMAN ([Pyruvate dehydrogenase [lipoamide]] kinase isozyme 4, mitochondrial OS=Homo sapiens GN=PDK4 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.015e-15 Identity = 53/156 (33.97%), Postives = 84/156 (53.85%), Query Frame = 3 Query: 93 EVGRWGCMKQTGVSLRYMMEFGSKPTDKNLLISAQFLHKELPIRIARRAIELETLPYGLSEKPAVLKVRDWYLDSFRDLRSFPDIRSTSDER---DFTQMIKAIKVRHNNVVPMMALGLQQLKKEMDPKIVYEDLHEIHQFLDRFYMSRIGIRMLI 551 EV + + +S++ +++FGS+ + S FL +ELP+R+A E++ LP L +V V+ WY+ S DL F + +S D++ DF + ++ RH+NVVP MA G+ + K V + FLDRFYM+RI RML+ Sbjct: 23 EVEHFSRYSPSPLSMKQLLDFGSENACERT--SFAFLRQELPVRLANILKEIDILPTQLVNTSSVQLVKSWYIQSLMDLVEFHE-KSPDDQKALSDFVDTLIKVRNRHHNVVPTMAQGIIEYKDACTVDPVTN--QNLQYFLDRFYMNRISTRMLM 173
BLAST of FC868868 vs. ExPASy Swiss-Prot
Match: PDK4_SPETR ([Pyruvate dehydrogenase [lipoamide]] kinase isozyme 4, mitochondrial OS=Spermophilus tridecemlineatus GN=PDK4 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.489e-15 Identity = 50/144 (34.72%), Postives = 80/144 (55.56%), Query Frame = 3 Query: 129 VSLRYMMEFGSKPTDKNLLISAQFLHKELPIRIARRAIELETLPYGLSEKPAVLKVRDWYLDSFRDLRSFPDIRSTSDER---DFTQMIKAIKVRHNNVVPMMALGLQQLKKEMDPKIVYEDLHEIHQFLDRFYMSRIGIRMLI 551 +S++ +++FGS + S FL +ELP+R+A E++ LP L+ +V V+ WY+ S +L F + +S D++ DF + ++ RH+NVVP MA G+ + K V + FLDRFYM+RI RML+ Sbjct: 35 LSMKQLLDFGSDNACERTSFS--FLRQELPVRLANILKEIDVLPDRLTNTSSVQLVKSWYIQSLMELVEFHE-KSPEDQKNLSDFVDTLIKVRNRHHNVVPTMAQGILEYKDTCTVDPVTN--QSLQYFLDRFYMNRISTRMLM 173
BLAST of FC868868 vs. ExPASy Swiss-Prot
Match: PDK_ASCSU ([Pyruvate dehydrogenase [lipoamide]] kinase, mitochondrial OS=Ascaris suum PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.706e-14 Identity = 55/171 (32.16%), Postives = 88/171 (51.46%), Query Frame = 3 Query: 54 KKLSETFSKSLIEEVGRWGCMKQTGVSLRYMMEFGSKPTDKNLLISAQFLHKELPIRIARRAIELETLPYGLSEKPAVLKVRDWYLDSFRDLRSF------PDIRSTSDERDFTQMIKAIKVRHNNVVPMMALGLQQLKKEMDPKIVYEDLHEIHQFLDRFYMSRIGIRML 548 ++L F+ ++ ++ + + + ++++ ++FG T K+ + FL EL +R+A E+ LP L + P+ V +WY +SF DL F PDI S F ++ I RH+ VV MA GL +L++ I E I FLDRFY++RI IRML Sbjct: 5 RRLLGPFTSAIARKLEHYSQFQPSSLTIQQYLDFGQTGTMKSSFL---FLKNELLVRLANIMQEISLLPPTLLKMPSRRLVSNWYCESFEDLLQFEHAQVEPDIMS-----KFNDQLQTILKRHSRVVETMAEGLIELRESEGVDIASE--RGIQYFLDRFYINRISIRML 165
BLAST of FC868868 vs. ExPASy Swiss-Prot
Match: PDHK2_CAEEL (Probable [pyruvate dehydrogenase [lipoamide]] kinase, mitochondrial OS=Caenorhabditis elegans GN=pdhk-2 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.483e-14 Identity = 55/167 (32.93%), Postives = 86/167 (51.50%), Query Frame = 3 Query: 51 AKKLSETFSKSLIEEVGRWGCMKQTGVSLRYMMEFGSKPTDKNLLISAQFLHKELPIRIARRAIELETLPYGLSEKPAVLKVRDWYLDSFRDLRSFPDIRSTSDE-RDFTQMIKAIKVRHNNVVPMMALGLQQLKKEMDPKIVYEDLHEIHQFLDRFYMSRIGIRML 548 ++KL F SL +++ + + + ++++ ++FG T N S FL EL +R+A E LP L + P+ V +WY +SF DL F S+ ++ F + + RH +VV MA GL +L++ I E I FLDRFY++RI IRML Sbjct: 4 SRKLLGPFVGSLAKKLDYYSQFQPSSLTIQQYLDFGRIGTSAN---SYTFLKNELLVRLANIMQEFTLLPPKLLQMPSSKMVSNWYAESFEDLLLFEASDSSPEQVARFNDQLTVVLKRHAHVVETMAEGLIELRESDGVDIASE--KGIQYFLDRFYINRISIRML 165 The following BLAST results are available for this feature:
BLAST of FC868868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868868 ID=FC868868; Name=FC868868; organism=Citrus clementina; type=EST; length=719bpback to top |