FC868869
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868869 vs. ExPASy Swiss-Prot
Match: PDF2_ARATH (Homeobox-leucine zipper protein PROTODERMAL FACTOR 2 OS=Arabidopsis thaliana GN=PDF2 PE=2 SV=1) HSP 1 Score: 278.485 bits (711), Expect = 2.151e-74 Identity = 133/220 (60.45%), Postives = 169/220 (76.82%), Query Frame = 1 Query: 1 WAVVSVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTAITAGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLR 660 WAVV VS+D++R ++ + RR PSGC++Q++PNGYSKVTW+EH E D+ VH +YKPL+ SG+ FGA+RWVATL+RQCE LA M++++ + GR+SMLKLA+RM +FC+GV AST H W ++ D DVRVMTRKS+DDPG PPGIVLSAATS W+PV+P+R+F+FLRDE R EWDILSNGG +QEMAHIA G + GNCVSLLR Sbjct: 393 WAVVDVSLDSLRPST---PILRTRRRPSGCLIQELPNGYSKVTWIEHMEVDDRSVHNMYKPLVQSGLAFGAKRWVATLERQCERLASSMASNIPGDLSVITSPEGRKSMLKLAERMVMSFCSGVGASTAHAWTTMSTTGSD-DVRVMTRKSMDDPGRPPGIVLSAATSFWIPVAPKRVFDFLRDENSRKEWDILSNGGMVQEMAHIANGHEPGNCVSLLR 608
BLAST of FC868869 vs. ExPASy Swiss-Prot
Match: ATML1_ARATH (Homeobox-leucine zipper protein MERISTEM L1 OS=Arabidopsis thaliana GN=ATML1 PE=2 SV=1) HSP 1 Score: 276.944 bits (707), Expect = 6.258e-74 Identity = 138/221 (62.44%), Postives = 170/221 (76.92%), Query Frame = 1 Query: 1 WAVVSVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTAITAG-GRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLR 660 WAVV VS+D++R + RR PSGC++Q++ NGYSKVTWVEH E D+ VH +YKPL+ +G+ FGA+RWVATL RQCE LA M++++ A D + IT+ GR+SMLKLA+RM +FC GV AST H W L+ D DVRVMTRKS+DDPG PPGIVLSAATS W+PV+P+R+F+FLRDE RSEWDILSNGG +QEMAHIA G+D GN VSLLR Sbjct: 402 WAVVDVSLDSLRPSP----ITRSRRRPSGCLIQELQNGYSKVTWVEHIEVDDRSVHNMYKPLVNTGLAFGAKRWVATLDRQCERLASSMASNIPACDLSVITSPEGRKSMLKLAERMVMSFCTGVGASTAHAWTTLSTTGSD-DVRVMTRKSMDDPGRPPGIVLSAATSFWIPVAPKRVFDFLRDENSRSEWDILSNGGLVQEMAHIANGRDPGNSVSLLR 617
BLAST of FC868869 vs. ExPASy Swiss-Prot
Match: HDG7_ARATH (Homeobox-leucine zipper protein HDG7 OS=Arabidopsis thaliana GN=HDG7 PE=2 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 2.636e-64 Identity = 119/220 (54.09%), Postives = 155/220 (70.45%), Query Frame = 1 Query: 1 WAVVSVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTAITAGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLR 660 WAVV VS D R ++ + PSGC++QD+ NG SKVTW+EH+EY+ES H LY+PL+ S +G GA +W+ATLQRQCE +L+ S+ DHT ++ G +S+LKLAQRM NF +G+ AS +HKW KL A NV +D R++TRKS+ EP GIVLSAATS+WLPV+ QRLF FL D + R++WDILSNG M+ + KGQ G+CVSLLR Sbjct: 343 WAVVDVSYDINRGNENLKSYGGSKMFPSGCIIQDIGNGCSKVTWIEHSEYEESHTHSLYQPLLSSSVGLGATKWLATLQRQCESFTMLL----SSEDHTGLSHAGTKSILKLAQRMKLNFYSGITASCIHKWEKLLAENVGQDTRILTRKSL----EPSGIVLSAATSLWLPVTQQRLFEFLCDGKCRNQWDILSNGASMENTLLVPKGQQEGSCVSLLR 554
BLAST of FC868869 vs. ExPASy Swiss-Prot
Match: HGL2_ARATH (Homeobox-leucine zipper protein GLABRA 2 OS=Arabidopsis thaliana GN=GL2 PE=2 SV=3) HSP 1 Score: 224.172 bits (570), Expect = 4.814e-58 Identity = 104/220 (47.27%), Postives = 151/220 (68.64%), Query Frame = 1 Query: 1 WAVVSVSIDTI-RETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTAITA-GGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSL 654 WA+V VS+ T + + CR+LPSGC+++D NG+SKVTWVEH + S V L++ L+ +G+ FGA+ WVATLQ CE L M+T+V +D +T GR+S+LK+AQRMT +F + AS+ H+W K+ +D+RV +RK++ DPGEP G+++ A++S+WLPVSP LF+F RDE R EWD LSNG +Q +A+++KGQD GN V++ Sbjct: 402 WAIVDVSVSVEDSNTEKEASLLKCRKLPSGCIIEDTSNGHSKVTWVEHLDVSASTVQPLFRSLVNTGLAFGARHWVATLQLHCERLVFFMATNVPTKDSLGVTTLAGRKSVLKMAQRMTQSFYRAIAASSYHQWTKITT-KTGQDMRVSSRKNLHDPGEPTGVIVCASSSLWLPVSPALLFDFFRDEARRHEWDALSNGAHVQSIANLSKGQDRGNSVAI 620
BLAST of FC868869 vs. ExPASy Swiss-Prot
Match: ROC8_ORYSJ (Homeobox-leucine zipper protein ROC8 OS=Oryza sativa subsp. japonica GN=ROC8 PE=2 SV=2) HSP 1 Score: 218.779 bits (556), Expect = 2.023e-56 Identity = 114/223 (51.12%), Postives = 154/223 (69.06%), Query Frame = 1 Query: 1 WAVVSVSIDTIRETS-GAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDE-SQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTA-ITAGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLR 660 WA+ VS+D R+ GAP RRLPSGC++ DM NGYSKVTWVEH E +E S ++ LY+ L++SG FGA RW+A LQR CE A L++ V H A +T G+RSM+KL+QRM ++FC+ + AS +H+W L+ N + VRV +S D PG+P G+VLSAATS+WLPV +F F+RDE RS+WD+LS+G +QE++ I G + GNC+SLLR Sbjct: 353 WAIADVSVDLQRDAHFGAPP-PRSRRLPSGCLIADMANGYSKVTWVEHMEVEEKSPINVLYRDLVLSGAAFGAHRWLAALQRACERYASLVALGVP--HHIAGVTPEGKRSMMKLSQRMVNSFCSSLGASQMHQWTTLSGSN-EVSVRVTMHRSTD-PGQPNGVVLSAATSIWLPVPCDHVFAFVRDENTRSQWDVLSHGNQVQEVSRIPNGSNPGNCISLLR 570
BLAST of FC868869 vs. ExPASy Swiss-Prot
Match: HDG3_ARATH (Homeobox-leucine zipper protein HDG3 OS=Arabidopsis thaliana GN=HDG3 PE=2 SV=2) HSP 1 Score: 209.534 bits (532), Expect = 1.227e-53 Identity = 105/223 (47.09%), Postives = 146/223 (65.47%), Query Frame = 1 Query: 1 WAVVSVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMST---SVSARDHTAITAGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLR 660 WAVV +SID + + CRR PSGC++Q+M +GYSKVTWVEH E D++ + +++ LI +G F A RWV TL RQCE ++ ++ST SV + DH +T G+ SMLK+A+R+ F AG+ +T + + +G ED+RVMT KSV+DPG+PPG+++ AATS WLP P +F+FLR+ R WD+L NG M ++A I G D NC SLLR Sbjct: 393 WAVVDISIDHLLPNIN----LKCRRRPSGCLIQEMHSGYSKVTWVEHVEVDDAGSYSIFEKLICTGQAFAANRWVGTLVRQCERISSILSTDFQSVDSGDHITLTNHGKMSMLKIAERIARTFFAGMTNAT---GSTIFSGVEGEDIRVMTMKSVNDPGKPPGVIICAATSFWLPAPPNTVFDFLREATHRHNWDVLCNGEMMHKIAEITNGIDKRNCASLLR 608
BLAST of FC868869 vs. ExPASy Swiss-Prot
Match: FWA_ARATH (Homeobox-leucine zipper protein HDG6 OS=Arabidopsis thaliana GN=HDG6 PE=1 SV=2) HSP 1 Score: 206.453 bits (524), Expect = 1.039e-52 Identity = 100/197 (50.76%), Postives = 139/197 (70.56%), Query Frame = 1 Query: 70 RRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTAITAGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLR 660 +RLPSG ++ D+ NGYS+VTW+E AEY+ES +HQLY+PLI G+G GA+RW+ATLQR CE L+ L ST+++ ++A G ++KLAQRMT N+ G+ + +V KW K+ NV +++ M RK+V++PGE GIVLSA+TSVWLPV+ LF F+ R EWDIL+N M+E I K + HGN +SLL+ Sbjct: 376 KRLPSGLIIDDLSNGYSQVTWIEQAEYNESHIHQLYQPLIGYGIGLGAKRWLATLQRHCESLSTLSSTNLTEIS-PGLSAKGATEIVKLAQRMTLNYYRGITSPSVDKWQKIQVENVAQNMSFMIRKNVNEPGELTGIVLSASTSVWLPVNQHTLFAFISHLSFRHEWDILTNDTTMEETIRIQKAKRHGNIISLLK 571
BLAST of FC868869 vs. ExPASy Swiss-Prot
Match: HDG11_ARATH (Homeobox-leucine zipper protein HDG11 OS=Arabidopsis thaliana GN=HDG11 PE=2 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.357e-52 Identity = 110/223 (49.33%), Postives = 143/223 (64.13%), Query Frame = 1 Query: 1 WAVVSVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQ-VHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD--HTAITAGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLR 660 W VV+VS D + S + ++ R PSGC++QDMPNGYSKVTWVEH E +E + VH+LY+ +I G+ FGA RWV TLQR CE A L + S+RD ++ G+RSM++LAQRM N+C V S N + V E V R + EP G VL AAT+ WLP SPQ +FNFL+DER R +WD+LSNG +QE+AHI+ G GNC+S+LR Sbjct: 377 WIVVNVSYDLPQFVSHSQSY----RFPSGCLIQDMPNGYSKVTWVEHIETEEKELVHELYREIIHRGIAFGADRWVTTLQRMCERFASLSVPASSSRDLGGVILSPEGKRSMMRLAQRMISNYCLSVSRS-----NNTRSTVVSELNEVGIRVTAHKSPEPNGTVLCAATTFWLPNSPQNVFNFLKDERTRPQWDVLSNGNAVQEVAHISNGSHPGNCISVLR 590
BLAST of FC868869 vs. ExPASy Swiss-Prot
Match: HDG12_ARATH (Homeobox-leucine zipper protein HDG12 OS=Arabidopsis thaliana GN=HDG12 PE=2 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 3.022e-52 Identity = 104/224 (46.43%), Postives = 148/224 (66.07%), Query Frame = 1 Query: 1 WAVVSVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQ-VHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTAITAG--GRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDE-DVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLR 660 WA+V+VS + + S + ++ R PSGC++QDM NGYSKVTWVEH E++E + +H+++K ++ G+ FGA+RW+ATLQR CE L+ + S+ D + G+RS+++LA RM NFC V T + +DE +RV + KS EP G+VL AATS WLP+SPQ +FNFL+DER R +WD+LSNG +QE+AHI G + GNC+S+LR Sbjct: 357 WAIVNVSYEFPQFISQSRSY----RFPSGCLIQDMSNGYSKVTWVEHGEFEEQEPIHEMFKDIVHKGLAFGAERWIATLQRMCERFTNLLEPATSSLDLGGVIPSPEGKRSIMRLAHRMVSNFCLSV--GTSNNTRSTVVSGLDEFGIRVTSHKSRH---EPNGMVLCAATSFWLPISPQNVFNFLKDERTRPQWDVLSNGNSVQEVAHITNGSNPGNCISVLR 571
BLAST of FC868869 vs. ExPASy Swiss-Prot
Match: ROC3_ORYSJ (Homeobox-leucine zipper protein ROC3 OS=Oryza sativa subsp. japonica GN=ROC3 PE=2 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 7.704e-48 Identity = 98/223 (43.95%), Postives = 140/223 (62.78%), Query Frame = 1 Query: 1 WAVVSVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEY--DESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTAI-TAGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLR 660 WA+V + E + V CRR PSGC++QDMPNGYS+V WVEH E +E + +++ + SG FGA RW++ LQRQCE LA ++ +++ D I T R +M+KL+QRM FCA + AS W L+ D +RV TRK+ + PG+P G++L+A ++ WLP + Q++F L DE+ R + +ILSNGG + E+AHIA G NC+SLLR Sbjct: 496 WAIVDFPAEGFEEGLLQASVVRCRRRPSGCIIQDMPNGYSRVVWVEHMEMVGEEKPLQPVFRDYVASGAAFGATRWLSILQRQCERLASELARNIA--DLGVIRTPEARTNMMKLSQRMITTFCANISASGTQSWTALSDSTQDT-IRVTTRKNTE-PGQPSGVILTAVSTSWLPFTHQQVFELLADEQQRCQLEILSNGGSLHEVAHIANGSHPRNCISLLR 714 The following BLAST results are available for this feature:
BLAST of FC868869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868869 ID=FC868869; Name=FC868869; organism=Citrus clementina; type=EST; length=661bpback to top |