FC868869
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868869 vs. ExPASy Swiss-Prot
Match: ROC3_ORYSI (Homeobox-leucine zipper protein ROC3 OS=Oryza sativa subsp. indica GN=ROC3 PE=3 SV=2) HSP 1 Score: 190.274 bits (482), Expect = 7.704e-48 Identity = 98/223 (43.95%), Postives = 140/223 (62.78%), Query Frame = 1 Query: 1 WAVVSVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEY--DESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTAI-TAGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLR 660 WA+V + E + V CRR PSGC++QDMPNGYS+V WVEH E +E + +++ + SG FGA RW++ LQRQCE LA ++ +++ D I T R +M+KL+QRM FCA + AS W L+ D +RV TRK+ + PG+P G++L+A ++ WLP + Q++F L DE+ R + +ILSNGG + E+AHIA G NC+SLLR Sbjct: 496 WAIVDFPAEGFEEGLLQASVVRCRRRPSGCIIQDMPNGYSRVVWVEHMEMVGEEKPLQPVFRDYVASGAAFGATRWLSILQRQCERLASELARNIA--DLGVIRTPEARTNMMKLSQRMITTFCANISASGTQSWTALSDSTQDT-IRVTTRKNTE-PGQPSGVILTAVSTSWLPFTHQQVFELLADEQQRCQLEILSNGGSLHEVAHIANGSHPRNCISLLR 714
BLAST of FC868869 vs. ExPASy Swiss-Prot
Match: ROC9_ORYSJ (Homeobox-leucine zipper protein ROC9 OS=Oryza sativa subsp. japonica GN=ROC9 PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 6.522e-47 Identity = 95/223 (42.60%), Postives = 133/223 (59.64%), Query Frame = 1 Query: 1 WAVVSVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTAI-TAGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKL----NAGNVDEDVRVMTRKSV-DDPGEPPGIVLSAATSVWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVS 651 WA+V VS D A + V C + PSGC++++ NG K+TWVEH V LY+ + SG+ FGA+RWVA LQ QCE + ++T+V RD T + T GRRS+LKLA RMT + C S W + + G D+D+ + +R++ DDPGEP G++ AA S WLPV+P L + LRDE R EWD++ G +Q ++AKG+D NCV+ Sbjct: 455 WAIVDVSFDESETGVHASSAVRCWKNPSGCLIEEQNNGRCKMTWVEHTRCRRCTVAPLYRAVTASGVAFGARRWVAALQLQCERMVFAVATNVPTRDSTGVSTLAGRRSVLKLAHRMTSSLCRTTGGSCDMAWRRAPKGGSGGGGDDDIWLTSRENAGDDPGEPQGLIACAAASTWLPVNPTALLDLLRDESRRPEWDVMLPGKSVQSRVNLAKGKDRTNCVT 677
BLAST of FC868869 vs. ExPASy Swiss-Prot
Match: HDG5_ARATH (Homeobox-leucine zipper protein HDG5 OS=Arabidopsis thaliana GN=HDG5 PE=2 SV=2) HSP 1 Score: 183.726 bits (465), Expect = 7.211e-46 Identity = 92/222 (41.44%), Postives = 136/222 (61.26%), Query Frame = 1 Query: 1 WAVVSVSIDTIRETSGAPAFVN--CRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTAITAGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLR 660 WA+V ID+ + + +R PSGC++QDMPNGYS+V WVEH E DE VH+ + + SGM FGA RW+ LQRQCE +A LM+ +++ +A RR++++L+QR+ FC + + W L+ D VR+ TRK + +PG+P G+VL A ++ WLP S ++F+ +RD+ +S ++L NG E+AHIA G GNC+SLLR Sbjct: 464 WAIVDFPIDSFHDQMQPMNTITHEYKRKPSGCIIQDMPNGYSQVKWVEHVEVDEKHVHETFAEYVKSGMAFGANRWLDVLQRQCERIASLMARNITDLG-VISSAEARRNIMRLSQRLVKTFCVNISTAYGQSWTALSETTKD-TVRITTRK-MCEPGQPTGVVLCAVSTTWLPFSHHQVFDLIRDQHHQSLLEVLFNGNSPHEVAHIANGSHPGNCISLLR 682
BLAST of FC868869 vs. ExPASy Swiss-Prot
Match: HDG8_ARATH (Homeobox-leucine zipper protein HDG8 OS=Arabidopsis thaliana GN=HDG8 PE=2 SV=2) HSP 1 Score: 149.443 bits (376), Expect = 1.507e-35 Identity = 79/207 (38.16%), Postives = 123/207 (59.42%), Query Frame = 1 Query: 67 CRRLPSGCVVQDMPNGYSKVTWVEHAEYDES-QVHQLYKPLIISGMGFGAQRWVATLQRQCECLAI--LMSTSVSARDHTAITAGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVD------EDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLR 660 C + PSGC++Q +P+ +SKV W+EH E D H++Y+ L+ G G+GA+RW+ TL+R CE +A+ + + S R T RRS++KL +RM NF + S G +D VRV R +++ G+PPGIV+SA++S+ +P++P ++F FL++ R +WDILS G + E+A I G NCV++LR Sbjct: 373 CYKRPSGCLIQALPDAHSKVMWIEHVEVDHKLDTHKIYRDLLSGGSGYGAKRWIVTLERMCERMALSSIQTLPPSDRSEVITTGEARRSVMKLGERMVKNFNEMLTMS----------GKIDFPQQSKNGVRVSIRMNIE-AGQPPGIVVSASSSLAIPLTPLQVFAFLQNLDTRQQWDILSYGTVVNEIARIVTGSSETNCVTILR 568
BLAST of FC868869 vs. ExPASy Swiss-Prot
Match: HDG10_ARATH (Homeobox-leucine zipper protein HDG10 OS=Arabidopsis thaliana GN=HDG10 PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 4.385e-35 Identity = 84/229 (36.68%), Postives = 131/229 (57.21%), Query Frame = 1 Query: 1 WAVVSVS--IDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEY-DESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTAI--TAGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLN----AGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLR 660 W + VS + + S AP C + PSG ++Q +P+G SKVTW+EH E D+ HQLY+ L+ G G+GA+RW ATLQR CE L++ T D+ + T GRRS++ L +RM NF A + +KL+ +G + VR+ R + + G+PPG+++ A +S+ LP+ P ++++FLR+ +R +WD+ G P+ E A G D N V+ L+ Sbjct: 370 WLIADVSCYLQNVEFESTAPI---CTKRPSGVLIQALPHGRSKVTWIEHVEVTDKVWPHQLYRDLLYGGFGYGARRWTATLQRMCERLSLYSMTDFPPTDYPGVVKTIEGRRSVMSLGERMLKNF-----AWIMKMSDKLDLPQQSGANNSGVRISVRTNTE-AGQPPGLIVCAGSSLSLPLPPLQVYDFLRNLEVRHQWDVHCQGNPVTEAARFVTGPDQKNNVTFLQ 589
BLAST of FC868869 vs. ExPASy Swiss-Prot
Match: HDG4_ARATH (Homeobox-leucine zipper protein HDG4 OS=Arabidopsis thaliana GN=HDG4 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.666e-34 Identity = 87/222 (39.19%), Postives = 128/222 (57.66%), Query Frame = 1 Query: 1 WAVVSVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVH-QLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTAI-TAGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLR 660 W VV ID I+ S A RR PSGC++Q M NGYS+VTWVEH E +E V ++ + + SG+ FGA+RW++ L+RQCE +A LM+T+++ D I + R++++KL+QRM FC + N + V++++RK G+V A + LP S Q++F+ LRD + S+ +IL G QE+AHIA G GN +SLLR Sbjct: 380 WMVVDFPIDRIKPAS-ATTTDQYRRKPSGCIIQAMRNGYSQVTWVEHVEVEEKHVQDEVVREFVESGVAFGAERWLSVLKRQCERMASLMATNIT--DLGVIPSVEARKNLMKLSQRMVKTFCLNII-------NSHGQAPTKDTVKIVSRKVCG------GLVPCAVSVTLLPYSHQQVFDLLRDNQRLSQLEILFMGSSFQEVAHIANGSHLGNSISLLR 585
BLAST of FC868869 vs. ExPASy Swiss-Prot
Match: HDG9_ARATH (Homeobox-leucine zipper protein HDG9 OS=Arabidopsis thaliana GN=HDG9 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 7.740e-32 Identity = 78/212 (36.79%), Postives = 127/212 (59.91%), Query Frame = 1 Query: 55 AFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQV--HQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSA---RDHTAI--TAGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDED----VRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLL 657 +F C + PSG ++Q +P+G+SKVTW+EH ++++V H+LY+ L+ G G+GA+RW TL+R CE L + STSV A D+ + T GR S++ L +RM NF A + NKL+ E +R+ R + ++ G+PPG+++ A +S+ LP+ P ++++FL++ +R +WD+L +G P E A G + N VS L Sbjct: 394 SFPICTKRPSGVLIQALPHGFSKVTWIEHVVVNDNRVRPHKLYRDLLYGGFGYGARRWTVTLERTCERL--IFSTSVPALPNNDNPGVVQTIRGRNSVMHLGERMLRNF-----AWMMKMVNKLDFSPQSETNNSGIRIGVRIN-NEAGQPPGLIVCAGSSLSLPLPPVQVYDFLKNLEVRHQWDVLCHGNPATEAARFVTGSNPRNTVSFL 597
BLAST of FC868869 vs. ExPASy Swiss-Prot
Match: TF1_ORYSJ (Homeobox-leucine zipper protein TF1 OS=Oryza sativa subsp. japonica GN=TF1 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.372e-25 Identity = 65/217 (29.95%), Postives = 120/217 (55.30%), Query Frame = 1 Query: 7 VVSVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTAITAGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLL 657 V+ VS+D F CR++PSG ++Q + KVT +EH D++ VH+LY+P ++G+ FGA+RWVAT+ RQ + + + + ++ GR++++KLA + +F G+ A+ W + ++D+RV R++ + +LS S+ LP+ ++ F+ LR+ R +WD+L +G ++E IA+G + + V++L Sbjct: 364 VIDVSLDD------GSIFSKCRKMPSGFLIQSIRPNSCKVTAIEHVLADDTGVHELYQP-CMNGLVFGARRWVATMARQSARMRDVHHNKTAPQ----VSTKGRKNLMKLADDLLASFAGGIAATGGGTWTVVIGAGTEKDIRVAYRRTTEG-SSSYNAILSVTASLRLPLPMRKTFDLLRNLTHRCKWDVLVHGSVVKEEVTIARGVGNDDTVTVL 568 The following BLAST results are available for this feature:
BLAST of FC868869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868869 ID=FC868869; Name=FC868869; organism=Citrus clementina; type=EST; length=661bpback to top |