FC868871

Overview
NameFC868871
Unique NameFC868871
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length678
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_PROMI (Catalase OS=Proteus mirabilis GN=katA PE=1 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.796e-48
Identity = 93/200 (46.50%), Postives = 132/200 (66.00%), Query Frame = 1
Query:   19 FEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            F VTHD++  T A      G +T +  RFSTV  ERG+ +  RD RGFA+KFYT EGN+D+VGNN PVF++RD +KFPD+ H +K +P+++++      DFFSH PESLH  +    D G+P  YR + G G +TY  INK  +  +VKFH++   G+K L++DEA  + G +   + +DL+++I  G+YP WKL IQIM
Sbjct:   64 FTVTHDITKYTRAKIFSEVGKKTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDMVGNNTPVFYLRDPLKFPDLNHIVKRDPRTNMRNMAYKWDFFSHLPESLHQLTIDMSDRGLPLSYRFVHGFGSHTYSFINKDNERFWVKFHFRCQQGIKNLMDDEAEALVGKDRESSQRDLFEAIERGDYPRWKLQIQIM 263          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_MICLU (Catalase OS=Micrococcus luteus GN=katA PE=1 SV=2)

HSP 1 Score: 191.815 bits (486), Expect = 2.796e-48
Identity = 98/218 (44.95%), Postives = 136/218 (62.39%), Query Frame = 1
Query:   19 FEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIMXXXXXXXXXXXXXXVTKT 672
            FEVT DVS  T A  +  PG +T  ++RFSTV  E GSP+T RD RGFA++FYT EGN+DLVGNN P+FF+RD MKF   + + K  P S +++     DF++++PES H  ++L    G+PR +R M G G +TY+ +N  G+ H+VK+H+    GV  L  DEA K+ G N     QDL++SIA G++P+W LYIQ +              +TKT
Sbjct:   71 FEVTEDVSKYTKA-LVFQPGTKTETLLRFSTVAGELGSPDTWRDVRGFALRFYTEEGNYDLVGNNTPIFFLRDPMKFTHFIRSQKRLPDSGLRDATMQWDFWTNNPESAHQVTYLMGPRGLPRTWREMNGYGSHTYLWVNAQGEKHWVKYHFISQQGVHNLSNDEATKIAGENADFHRQDLFESIAKGDHPKWDLYIQAIPYEEGKTYRFNPFDLTKT 287          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_LACSK (Catalase OS=Lactobacillus sakei GN=katA PE=3 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 1.388e-47
Identity = 91/206 (44.17%), Postives = 131/206 (63.59%), Query Frame = 1
Query:    1 ASAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            A AK +F+VT D+S  T A      G +TP+I RFS V  E G P+T RD RGFAVKFYT EGN+D+VGNN PVFFV D +KFPD +H+ K +P++H +      DF+S  PES+H  + L  D G+P  YR M G G +T+  +N  G+  +VK+H+K   G+  L  + A ++ G +  +   DL+D+I +G+YP W + +Q++
Sbjct:   57 AGAKGYFKVTKDMSAYTKAAVFSGVGKKTPLITRFSQVAGEAGYPDTYRDVRGFAVKFYTEEGNYDIVGNNTPVFFVNDPLKFPDFIHSQKRDPRTHARSQDMQWDFWSLSPESVHQVTILMSDRGIPASYRMMHGFGSHTFKWVNAQGEQFWVKYHFKTNQGIHNLSNELADELAGKDTDYLQNDLFDAIETGDYPSWTVAVQLV 262          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_CANTR (Peroxisomal catalase OS=Candida tropicalis GN=POX9 PE=1 SV=4)

HSP 1 Score: 189.504 bits (480), Expect = 1.388e-47
Identity = 93/200 (46.50%), Postives = 124/200 (62.00%), Query Frame = 1
Query:   19 FEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            FEVT D++++  A FL   G +T +  RFSTV  E GS +T RDPRGFA KFYT EGN DLV NN PVFF+RD  KFP  +H  K NP++H+++     D+ + + ES+H    LF D G P  YR M G   +TY   N  G+  YV+ H+    G+K L  +EA  + G+N  +A +DL+ +IA+GNYP W  YIQ M
Sbjct:   63 FEVTDDITDVCAAKFLDTVGKKTRIFTRFSTVGGELGSADTARDPRGFATKFYTEEGNLDLVYNNTPVFFIRDPSKFPHFIHTQKRNPETHLKDANMFWDYLTTNEESVHQVMVLFSDRGTPASYREMNGYSGHTYKWSNNKGEWFYVQVHFISDQGIKTLTNEEAGSLAGSNPDYAQEDLFKNIAAGNYPSWTCYIQTM 262          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_CANAL (Peroxisomal catalase OS=Candida albicans GN=CTA1 PE=2 SV=4)

HSP 1 Score: 189.119 bits (479), Expect = 1.812e-47
Identity = 93/200 (46.50%), Postives = 124/200 (62.00%), Query Frame = 1
Query:   19 FEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            FEVT D++++  A FL   G +T +  RFSTV  E GS +T RDPRGFA K YT EGN DLV NN PVFF+RD  KFP  +H  K NP++H+++     D+ + + ES+H    LF D G P  YR M G   +TY   NK G+  YV+ H+    G+K L  +EA  + G+N  +A +DL+ +IA+GNYP W  YIQ M
Sbjct:   63 FEVTDDITDICAAKFLDTVGKKTRIFTRFSTVGGELGSADTARDPRGFATKIYTEEGNLDLVYNNTPVFFIRDPSKFPHFIHTQKRNPETHLKDANMFWDYLTSNEESIHQVMVLFSDRGTPASYREMNGYSGHTYKWSNKKGEWFYVQVHFISDQGIKTLNNEEAGALAGSNPDYAQEDLFKNIAAGNYPSWTAYIQTM 262          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_DROME (Catalase OS=Drosophila melanogaster GN=Cat PE=1 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 8.995e-47
Identity = 93/206 (45.15%), Postives = 126/206 (61.17%), Query Frame = 1
Query:    1 ASAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            A A  +FEVTHD++    A        +TP+ VRFSTV  E GS +T RDPRGFAVKFYT +G +DLVGNN PVFF+RD + FP  +H  K NP++H+++     DF +  PES H    LF D G P  Y HM G G +T+ LIN  G+  Y KFH+K   G+K L    A ++   +  ++ +DLY+ I +  +P W +YIQ+M
Sbjct:   77 AGAFGYFEVTHDITQYCAAKIFDKVKKRTPLAVRFSTVGGESGSADTARDPRGFAVKFYTEDGVWDLVGNNTPVFFIRDPILFPSFIHTQKRNPQTHLKDPDMFWDFLTLRPESAHQVCILFSDRGTPDGYCHMNGYGSHTFKLINAKGEPIYAKFHFKTDQGIKNLDVKTADQLASTDPDYSIRDLYNRIKTCKFPSWTMYIQVM 282          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_DESVM (Catalase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=katA PE=3 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 8.995e-47
Identity = 88/200 (44.00%), Postives = 131/200 (65.50%), Query Frame = 1
Query:   19 FEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            F VTHD+++ T A      G +T + VRFSTV  ERG+ +  RD RGFA+KFYT +GN+DLVGNN PVFF+RD +KFPD+ HA+K +P+++++      DF++  PE+LH  + +  D G+P  YRHM G G +T+  I+   + ++VKFH +   G+K L + EA  +   +     +DLYDSI  G++P W +Y+Q+M
Sbjct:   64 FTVTHDITSYTKAALFSKIGKKTDLFVRFSTVAGERGAADAERDIRGFAIKFYTEQGNWDLVGNNTPVFFLRDPLKFPDLNHAVKRDPRTNMRSAKNNWDFWTSLPEALHQVTVVMSDRGIPASYRHMHGFGSHTFSFISPDNQRYWVKFHLRTQQGIKNLTDAEAEAIVARDRESHQRDLYDSIERGDFPRWTMYVQVM 263          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_STAHJ (Catalase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=katA PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.175e-46
Identity = 90/203 (44.33%), Postives = 134/203 (66.01%), Query Frame = 1
Query:   19 FEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHI---QENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            F VT+D++  T A      G QT +  RFSTV  ERG+ +  RD RGFA+KFYT +GN+DLVGNN PVFF RD   F  +  A+K +P++++   Q NW   DF++  PE+LH  + L  D G+P+D+RHM G G +TY + N  G+  +VK+H++   G++   +DEA ++ G +   + +DLYD+I +G+YP+WK+YIQ+M
Sbjct:   66 FTVTNDITKYTNAKIFSEVGKQTEMFARFSTVAGERGAADLERDIRGFALKFYTEDGNWDLVGNNTPVFFFRDSKLFVSLNRAVKRDPRTNMRSPQNNW---DFWTGVPEALHQVTILMSDRGMPKDFRHMHGFGSHTYSMYNDEGERVWVKYHFRTQQGIENYTDDEAAEIVGQDRESSQRDLYDAIENGDYPKWKMYIQVM 265          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_PICAN (Peroxisomal catalase OS=Pichia angusta GN=PXP9 PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.004e-46
Identity = 91/206 (44.17%), Postives = 130/206 (63.11%), Query Frame = 1
Query:    1 ASAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            A A   FEVT D++++  A FL   G +T +  RFSTV  E+GS +T RDPRGFA KFYT +GN DLV NN P+FF+RD +KFP  +H  K NP +++++     D+ + + ESLH   +LF + G P  YR M G   +TY   N  G+  YV+ H+    GV  LL++EA ++ G +  H+T+DL+++I  G+YP W+ YIQ M
Sbjct:   69 AGAYGVFEVTDDITDVCSAKFLDTVGKKTRIFTRFSTVGGEKGSADTARDPRGFATKFYTEDGNLDLVYNNTPIFFIRDPIKFPHFIHTQKRNPATNLKDPNMFWDYLTANDESLHQVMYLFSNRGTPASYRTMNGYSGHTYKWYNSKGEWVYVQVHFIANQGVHNLLDEEAGRLAGEDPDHSTRDLWEAIEKGDYPSWECYIQTM 274          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_BACFR (Catalase OS=Bacteroides fragilis GN=katA PE=1 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.004e-46
Identity = 94/203 (46.31%), Postives = 128/203 (63.05%), Query Frame = 1
Query:   19 FEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQ---ENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            F VTHD++  T A      G QT   VRFSTV  ERG+ +  RD RGFA+KFYT EGN+DLVGNN PVFF+RD +KFPD+ HA+K +P+++++    NW   DF++  PE+LH  +      G+P  YRHM G G +TY  +N   K  +VKFH K   G+K L + EA  +   +     +DLY+SI  G++P+WK  IQ+M
Sbjct:   64 FTVTHDITKYTRAAIFSQVGKQTECFVRFSTVAGERGAADAERDIRGFAMKFYTEEGNWDLVGNNTPVFFLRDPLKFPDLNHAVKRDPRNNMRSANNNW---DFWTLLPEALHQVTITMSPRGIPASYRHMHGFGSHTYSFLNAENKRIWVKFHLKTMQGIKNLTDQEAEAIIAKDRESHQRDLYESIERGDFPKWKFQIQLM 263          
The following BLAST results are available for this feature:
BLAST of FC868871 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CATA_PROMI2.796e-4846.50Catalase OS=Proteus mirabilis GN=katA PE=1 SV=1[more]
CATA_MICLU2.796e-4844.95Catalase OS=Micrococcus luteus GN=katA PE=1 SV=2[more]
CATA_LACSK1.388e-4744.17Catalase OS=Lactobacillus sakei GN=katA PE=3 SV=2[more]
CATA_CANTR1.388e-4746.50Peroxisomal catalase OS=Candida tropicalis GN=POX9... [more]
CATA_CANAL1.812e-4746.50Peroxisomal catalase OS=Candida albicans GN=CTA1 P... [more]
CATA_DROME8.995e-4745.15Catalase OS=Drosophila melanogaster GN=Cat PE=1 SV... [more]
CATA_DESVM8.995e-4744.00Catalase OS=Desulfovibrio vulgaris (strain Miyazak... [more]
CATA_STAHJ1.175e-4644.33Catalase OS=Staphylococcus haemolyticus (strain JC... [more]
CATA_PICAN2.004e-4644.17Peroxisomal catalase OS=Pichia angusta GN=PXP9 PE=... [more]
CATA_BACFR2.004e-4646.31Catalase OS=Bacteroides fragilis GN=katA PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC31005H02EF AbioticL1 Citrus clementina cDNA clone C31005H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868871 ID=FC868871; Name=FC868871; organism=Citrus clementina; type=EST; length=678bp
GCCAGTGCTAAGGTCTTCTTTGAGGTCACCCATGATGTTTCTAACCTTAC
TTGTGCTGATTTCCTTCGAGCCCCAGGGGTTCAGACGCCTGTCATTGTCC
GCTTCTCCACTGTTATCCATGAGCGTGGCAGCCCTGAAACCCTGAGAGAT
CCTCGAGGATTTGCGGTCAAGTTTTACACCAGAGAGGGTAATTTTGATCT
TGTGGGAAACAATTTCCCCGTCTTTTTTGTCCGTGATGGAATGAAATTCC
CTGACATGGTCCATGCGCTTAAACCTAACCCAAAGTCTCACATCCAAGAG
AACTGGAGGATTGTTGACTTCTTCTCCCATCATCCTGAAAGCTTGCACAT
GTTCTCCTTCTTGTTTGATGATGTGGGTGTCCCACGAGATTACAGGCACA
TGGAAGGATCTGGTGTTAACACTTACATGCTGATCAATAAGGCTGGGAAA
GCACATTATGTGAAATTTCATTGGAAACCCACTTGTGGGGTTAAGTGTTT
ATTGGAAGATGAGGCAATCAAGGTTGGAGGAGCCAACCACAGCCATGCTA
CTCAAGATCTTTATGACTCAATTGCATCTGGAAACTATCCTGAGTGGAAA
CTCTACATCCAGATTATGGATCCCGACCATGAGGACNAATTTGACTTTGA
CCCACTTGATGTAACCAAGACTGGCCTG
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