FC868871

Overview
NameFC868871
Unique NameFC868871
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length678
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_STAAS (Catalase OS=Staphylococcus aureus (strain MSSA476) GN=katA PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.436e-44
Identity = 88/203 (43.35%), Postives = 131/203 (64.53%), Query Frame = 1 
Query:   19 FEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHI---QENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            F VT D++  T A      G QT +  RFSTV  ERG+ +  RD RGFA+KFYT EGN+DLVGNN PVFF RD   F  +  A+K +P++++   Q NW   DF++  PE+LH  + L  D G+P+D RHM G G +TY + N +G+  +VKFH++   G++ L ++EA ++   +   + +DL+++I  G+YP+W +YIQ+M
Sbjct:   66 FTVTKDITKYTNAKIFSEIGKQTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTNMRDAQNNW---DFWTGLPEALHQVTILMSDRGIPKDLRHMHGFGSHTYSMYNDSGERVWVKFHFRTQQGIENLTDEEAAEIIATDRDSSQRDLFEAIEKGDYPKWTMYIQVM 265
[Close]
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_STAAN (Catalase OS=Staphylococcus aureus (strain N315) GN=katA PE=1 SV=2)

HSP 1 Score: 179.489 bits (454), Expect = 1.436e-44
Identity = 88/203 (43.35%), Postives = 131/203 (64.53%), Query Frame = 1 
Query:   19 FEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHI---QENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            F VT D++  T A      G QT +  RFSTV  ERG+ +  RD RGFA+KFYT EGN+DLVGNN PVFF RD   F  +  A+K +P++++   Q NW   DF++  PE+LH  + L  D G+P+D RHM G G +TY + N +G+  +VKFH++   G++ L ++EA ++   +   + +DL+++I  G+YP+W +YIQ+M
Sbjct:   66 FTVTKDITKYTNAKIFSEIGKQTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTNMRDAQNNW---DFWTGLPEALHQVTILMSDRGIPKDLRHMHGFGSHTYSMYNDSGERVWVKFHFRTQQGIENLTDEEAAEIIATDRDSSQRDLFEAIEKGDYPKWTMYIQVM 265
[Close]
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_STAAM (Catalase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=katA PE=1 SV=2)

HSP 1 Score: 179.489 bits (454), Expect = 1.436e-44
Identity = 88/203 (43.35%), Postives = 131/203 (64.53%), Query Frame = 1 
Query:   19 FEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHI---QENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            F VT D++  T A      G QT +  RFSTV  ERG+ +  RD RGFA+KFYT EGN+DLVGNN PVFF RD   F  +  A+K +P++++   Q NW   DF++  PE+LH  + L  D G+P+D RHM G G +TY + N +G+  +VKFH++   G++ L ++EA ++   +   + +DL+++I  G+YP+W +YIQ+M
Sbjct:   66 FTVTKDITKYTNAKIFSEIGKQTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTNMRDAQNNW---DFWTGLPEALHQVTILMSDRGIPKDLRHMHGFGSHTYSMYNDSGERVWVKFHFRTQQGIENLTDEEAAEIIATDRDSSQRDLFEAIEKGDYPKWTMYIQVM 265
[Close]
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_STAAC (Catalase OS=Staphylococcus aureus (strain COL) GN=katA PE=3 SV=2)

HSP 1 Score: 179.489 bits (454), Expect = 1.436e-44
Identity = 88/203 (43.35%), Postives = 131/203 (64.53%), Query Frame = 1 
Query:   19 FEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHI---QENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            F VT D++  T A      G QT +  RFSTV  ERG+ +  RD RGFA+KFYT EGN+DLVGNN PVFF RD   F  +  A+K +P++++   Q NW   DF++  PE+LH  + L  D G+P+D RHM G G +TY + N +G+  +VKFH++   G++ L ++EA ++   +   + +DL+++I  G+YP+W +YIQ+M
Sbjct:   66 FTVTKDITKYTNAKIFSEIGKQTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTNMRDAQNNW---DFWTGLPEALHQVTILMSDRGIPKDLRHMHGFGSHTYSMYNDSGERVWVKFHFRTQQGIENLTDEEAAEIIATDRDSSQRDLFEAIEKGDYPKWTMYIQVM 265
[Close]
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_STAAB (Catalase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=katA PE=3 SV=2)

HSP 1 Score: 179.489 bits (454), Expect = 1.436e-44
Identity = 88/203 (43.35%), Postives = 131/203 (64.53%), Query Frame = 1 
Query:   19 FEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHI---QENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            F VT D++  T A      G QT +  RFSTV  ERG+ +  RD RGFA+KFYT EGN+DLVGNN PVFF RD   F  +  A+K +P++++   Q NW   DF++  PE+LH  + L  D G+P+D RHM G G +TY + N +G+  +VKFH++   G++ L ++EA ++   +   + +DL+++I  G+YP+W +YIQ+M
Sbjct:   66 FTVTKDITKYTNAKIFSEIGKQTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTNMRDAQNNW---DFWTGLPEALHQVTILMSDRGIPKDLRHMHGFGSHTYSMYNDSGERVWVKFHFRTQQGIENLTDEEAAEIIATDRDSSQRDLFEAIEKGDYPKWTMYIQVM 265
[Close]
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_STAA8 (Catalase OS=Staphylococcus aureus (strain NCTC 8325) GN=katA PE=2 SV=2)

HSP 1 Score: 179.489 bits (454), Expect = 1.436e-44
Identity = 88/203 (43.35%), Postives = 131/203 (64.53%), Query Frame = 1 
Query:   19 FEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHI---QENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            F VT D++  T A      G QT +  RFSTV  ERG+ +  RD RGFA+KFYT EGN+DLVGNN PVFF RD   F  +  A+K +P++++   Q NW   DF++  PE+LH  + L  D G+P+D RHM G G +TY + N +G+  +VKFH++   G++ L ++EA ++   +   + +DL+++I  G+YP+W +YIQ+M
Sbjct:   66 FTVTKDITKYTNAKIFSEIGKQTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTNMRDAQNNW---DFWTGLPEALHQVTILMSDRGIPKDLRHMHGFGSHTYSMYNDSGERVWVKFHFRTQQGIENLTDEEAAEIIATDRDSSQRDLFEAIEKGDYPKWTMYIQVM 265
[Close]
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_STAA3 (Catalase OS=Staphylococcus aureus (strain USA300) GN=katA PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.436e-44
Identity = 88/203 (43.35%), Postives = 131/203 (64.53%), Query Frame = 1 
Query:   19 FEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHI---QENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            F VT D++  T A      G QT +  RFSTV  ERG+ +  RD RGFA+KFYT EGN+DLVGNN PVFF RD   F  +  A+K +P++++   Q NW   DF++  PE+LH  + L  D G+P+D RHM G G +TY + N +G+  +VKFH++   G++ L ++EA ++   +   + +DL+++I  G+YP+W +YIQ+M
Sbjct:   66 FTVTKDITKYTNAKIFSEIGKQTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTNMRDAQNNW---DFWTGLPEALHQVTILMSDRGIPKDLRHMHGFGSHTYSMYNDSGERVWVKFHFRTQQGIENLTDEEAAEIIATDRDSSQRDLFEAIEKGDYPKWTMYIQVM 265
[Close]
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_STAES (Catalase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=katA PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 5.457e-44
Identity = 87/203 (42.86%), Postives = 133/203 (65.52%), Query Frame = 1 
Query:   19 FEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHI---QENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            F VT+D++  T A      G QT +  RFSTV  ERG+ +  RD RGFA+KFYT +GN+DLVGNN PVFF RD   F  +  A+K +P++++   Q NW   DF++  PE+LH  + L  D G+P+ +R+M G G +TY + N  G+  +VK+H++   G++   ++EA K+ G +   + +DLY++I +G+YP+WK+YIQ+M
Sbjct:   66 FTVTNDITQYTNAKIFSEVGKQTEMFARFSTVSGERGAADLERDIRGFALKFYTEDGNWDLVGNNTPVFFFRDPKLFISLNRAVKRDPRTNMRSAQNNW---DFWTGLPEALHQVTILMSDRGMPKGFRNMHGFGSHTYSMYNDKGERVWVKYHFRTQQGIENYTDEEAAKIVGMDRDSSQRDLYNAIENGDYPKWKMYIQVM 265
[Close]
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_STAEQ (Catalase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=katA PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 5.457e-44
Identity = 87/203 (42.86%), Postives = 133/203 (65.52%), Query Frame = 1 
Query:   19 FEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHI---QENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            F VT+D++  T A      G QT +  RFSTV  ERG+ +  RD RGFA+KFYT +GN+DLVGNN PVFF RD   F  +  A+K +P++++   Q NW   DF++  PE+LH  + L  D G+P+ +R+M G G +TY + N  G+  +VK+H++   G++   ++EA K+ G +   + +DLY++I +G+YP+WK+YIQ+M
Sbjct:   66 FTVTNDITQYTNAKIFSEVGKQTEMFARFSTVSGERGAADLERDIRGFALKFYTEDGNWDLVGNNTPVFFFRDPKLFISLNRAVKRDPRTNMRSAQNNW---DFWTGLPEALHQVTILMSDRGMPKGFRNMHGFGSHTYSMYNDKGERVWVKYHFRTQQGIENYTDEEAAKIVGMDRDSSQRDLYNAIENGDYPKWKMYIQVM 265
[Close]
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_STAEP (Catalase OS=Staphylococcus epidermidis GN=katA PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 5.457e-44
Identity = 87/203 (42.86%), Postives = 133/203 (65.52%), Query Frame = 1 
Query:   19 FEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHI---QENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            F VT+D++  T A      G QT +  RFSTV  ERG+ +  RD RGFA+KFYT +GN+DLVGNN PVFF RD   F  +  A+K +P++++   Q NW   DF++  PE+LH  + L  D G+P+ +R+M G G +TY + N  G+  +VK+H++   G++   ++EA K+ G +   + +DLY++I +G+YP+WK+YIQ+M
Sbjct:   66 FTVTNDITQYTNAKIFSEVGKQTEMFARFSTVSGERGAADLERDIRGFALKFYTEDGNWDLVGNNTPVFFFRDPKLFISLNRAVKRDPRTNMRSAQNNW---DFWTGLPEALHQVTILMSDRGMPKGFRNMHGFGSHTYSMYNDKGERVWVKYHFRTQQGIENYTDEEAAKIVGMDRDSSQRDLYNAIENGDYPKWKMYIQVM 265
The following BLAST results are available for this feature:
BLAST of FC868871 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CATA_STAAS1.436e-4443.35Catalase OS=Staphylococcus aureus (strain MSSA476)... [more]
CATA_STAAN1.436e-4443.35Catalase OS=Staphylococcus aureus (strain N315) GN... [more]
CATA_STAAM1.436e-4443.35Catalase OS=Staphylococcus aureus (strain Mu50 / A... [more]
CATA_STAAC1.436e-4443.35Catalase OS=Staphylococcus aureus (strain COL) GN=... [more]
CATA_STAAB1.436e-4443.35Catalase OS=Staphylococcus aureus (strain bovine R... [more]
CATA_STAA81.436e-4443.35Catalase OS=Staphylococcus aureus (strain NCTC 832... [more]
CATA_STAA31.436e-4443.35Catalase OS=Staphylococcus aureus (strain USA300) ... [more]
CATA_STAES5.457e-4442.86Catalase OS=Staphylococcus epidermidis (strain ATC... [more]
CATA_STAEQ5.457e-4442.86Catalase OS=Staphylococcus epidermidis (strain ATC... [more]
CATA_STAEP5.457e-4442.86Catalase OS=Staphylococcus epidermidis GN=katA PE=... [more]

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Properties
Property NameValue
Genbank descriptionC31005H02EF AbioticL1 Citrus clementina cDNA clone C31005H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868871 ID=FC868871; Name=FC868871; organism=Citrus clementina; type=EST; length=678bp
GCCAGTGCTAAGGTCTTCTTTGAGGTCACCCATGATGTTTCTAACCTTAC
TTGTGCTGATTTCCTTCGAGCCCCAGGGGTTCAGACGCCTGTCATTGTCC
GCTTCTCCACTGTTATCCATGAGCGTGGCAGCCCTGAAACCCTGAGAGAT
CCTCGAGGATTTGCGGTCAAGTTTTACACCAGAGAGGGTAATTTTGATCT
TGTGGGAAACAATTTCCCCGTCTTTTTTGTCCGTGATGGAATGAAATTCC
CTGACATGGTCCATGCGCTTAAACCTAACCCAAAGTCTCACATCCAAGAG
AACTGGAGGATTGTTGACTTCTTCTCCCATCATCCTGAAAGCTTGCACAT
GTTCTCCTTCTTGTTTGATGATGTGGGTGTCCCACGAGATTACAGGCACA
TGGAAGGATCTGGTGTTAACACTTACATGCTGATCAATAAGGCTGGGAAA
GCACATTATGTGAAATTTCATTGGAAACCCACTTGTGGGGTTAAGTGTTT
ATTGGAAGATGAGGCAATCAAGGTTGGAGGAGCCAACCACAGCCATGCTA
CTCAAGATCTTTATGACTCAATTGCATCTGGAAACTATCCTGAGTGGAAA
CTCTACATCCAGATTATGGATCCCGACCATGAGGACNAATTTGACTTTGA
CCCACTTGATGTAACCAAGACTGGCCTG
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