FC868871

Overview
NameFC868871
Unique NameFC868871
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length678
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA2_RICCO (Catalase isozyme 2 OS=Ricinus communis GN=CAT2 PE=2 SV=1)

HSP 1 Score: 380.948 bits (977), Expect = 3.250e-105
Identity = 175/205 (85.37%), Postives = 190/205 (92.68%), Query Frame = 1
Query:    4 SAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            SAK FFEVTHDV++LTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFA KFYTREGNFD+VGNNFPVFF+RDG+KFPD+VHA KPNPKSHIQE WRI DF SHHPESL  F++ FDDVG+P+DYRHMEG GV+TY LINKAGK  YVKFHWKPTCGVKCL++DEAIKVGGANHSHATQDLYDSIA+GN+PEWKL IQ M
Sbjct:   70 SAKGFFEVTHDVTDLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFATKFYTREGNFDIVGNNFPVFFIRDGIKFPDVVHAFKPNPKSHIQEYWRIFDFCSHHPESLSTFAWFFDDVGIPQDYRHMEGFGVHTYCLINKAGKVTYVKFHWKPTCGVKCLMDDEAIKVGGANHSHATQDLYDSIAAGNFPEWKLMIQTM 274          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA1_HORVU (Catalase isozyme 1 OS=Hordeum vulgare GN=CAT1 PE=2 SV=1)

HSP 1 Score: 380.948 bits (977), Expect = 3.250e-105
Identity = 176/224 (78.57%), Postives = 196/224 (87.50%), Query Frame = 1
Query:    1 ASAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIMXXXXXXXXXXXXXXVTKT 672
            ASAK FFEVTHDVS LTCADFLRAPGVQTPVIVRFSTV+HERGSPETLRDPRGFAVKFYTREGNFDLVGNN PVFF+RDGMKFPDMVHA KP+PK+++QENWR+VDFFSHHPESLHMF+FLFDDVG+P +YRHM+G GVNTY LI++ GKAH VKFHWKPTCGVKCLL+DEA+ VGG  H+HAT+DL DSIA+GNYPEWKL+IQ +              VTKT
Sbjct:   69 ASAKGFFEVTHDVSQLTCADFLRAPGVQTPVIVRFSTVVHERGSPETLRDPRGFAVKFYTREGNFDLVGNNMPVFFIRDGMKFPDMVHAFKPSPKTNMQENWRVVDFFSHHPESLHMFTFLFDDVGIPLNYRHMDGFGVNTYTLISRDGKAHLVKFHWKPTCGVKCLLDDEAVTVGGTCHTHATKDLTDSIAAGNYPEWKLFIQTIDADHEDRFDFDPLDVTKT 292          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_AVIMR (Catalase OS=Avicennia marina PE=2 SV=1)

HSP 1 Score: 379.022 bits (972), Expect = 1.235e-104
Identity = 170/206 (82.52%), Postives = 193/206 (93.69%), Query Frame = 1
Query:    1 ASAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            A+AK FFEVTHDVS+LTCADFLRAPGVQTP+IVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFD+VGNNFPVFF+RD +KFPD++HA KPNPKSHIQE+WRI+DF SH PESL  F++ +DDVG+P+DYRHMEG GV++Y LINKAGK +YVKFHWKPTCGVKCL+EDEA+++GG NHSHATQDLYDSIA+GNYPEWKLY QIM
Sbjct:   69 ATAKGFFEVTHDVSHLTCADFLRAPGVQTPLIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDIVGNNFPVFFIRDAIKFPDVIHAFKPNPKSHIQESWRILDFCSHFPESLLTFAWFYDDVGIPQDYRHMEGFGVHSYTLINKAGKVNYVKFHWKPTCGVKCLMEDEAVRIGGTNHSHATQDLYDSIAAGNYPEWKLYFQIM 274          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA2_WHEAT (Catalase OS=Triticum aestivum GN=CATA PE=2 SV=1)

HSP 1 Score: 377.867 bits (969), Expect = 2.751e-104
Identity = 175/224 (78.12%), Postives = 195/224 (87.05%), Query Frame = 1
Query:    1 ASAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIMXXXXXXXXXXXXXXVTKT 672
            ASAK FFEVTHDVS LTCADFLRAPGVQTPVIVRFSTV+HERGSPETLRDPRGFAVKFYTREGNFDLVGNN PVFF+RDGMKFPDMVHA KP+ K+++QENWR+VDFFSHHPESLHMF+FLFDDVG+P +YRHM+G GVNTY LI++ GKAH VKFHWKPTCGVKCLL+DEA+ VGG  H+HAT+DL DSIA+GNYPEWKL+IQ +              VTKT
Sbjct:   69 ASAKGFFEVTHDVSQLTCADFLRAPGVQTPVIVRFSTVVHERGSPETLRDPRGFAVKFYTREGNFDLVGNNMPVFFIRDGMKFPDMVHAFKPSSKTNMQENWRVVDFFSHHPESLHMFTFLFDDVGIPLNYRHMDGFGVNTYTLISRDGKAHLVKFHWKPTCGVKCLLDDEAVTVGGTCHTHATKDLTDSIAAGNYPEWKLFIQTIDADHEDRFDFDPLDVTKT 292          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA2_MAIZE (Catalase isozyme 2 OS=Zea mays GN=CAT2 PE=2 SV=3)

HSP 1 Score: 372.089 bits (954), Expect = 1.510e-102
Identity = 168/206 (81.55%), Postives = 194/206 (94.17%), Query Frame = 1
Query:    1 ASAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            ASAK FFEVTHD+++LTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGN+DLVGNNFPVFF+RDG+KFPDMVHALKPNP++HIQ+NWRI+DFFSHHPESLHMFSFLFDDVG+P DYRHM+GSGV+TY L+++AG   YVKFHW+PTCGV+ L++DEA++  GANHSHAT+DL D+IA+GN+PEW LYIQ M
Sbjct:   68 ASAKGFFEVTHDITHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLVGNNFPVFFIRDGIKFPDMVHALKPNPRTHIQDNWRILDFFSHHPESLHMFSFLFDDVGIPADYRHMDGSGVHTYTLVSRAGTVTYVKFHWRPTCGVRSLMDDEAVRC-GANHSHATKDLTDAIAAGNFPEWTLYIQTM 272          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_IPOBA (Catalase OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 370.933 bits (951), Expect = 3.363e-102
Identity = 165/206 (80.10%), Postives = 192/206 (93.20%), Query Frame = 1
Query:    1 ASAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            ASAK FFEVTHD+++LTCADFLRAPGVQTP+IVRFSTVIHERGSPET+RDPRGFAVK YTR GN+DLVGNNFPVFF+RDG +FPD++HA KPNPKSHIQENWRI+D+ SH PESL+ F++ +DDVG+P DYRHMEG GV+T+ +INK GKA+YVKFHWKPTCGVKCLLE+EAI++GG NHSHATQDLY+SIA+GNYPEWKLYIQ+M
Sbjct:   69 ASAKGFFEVTHDITHLTCADFLRAPGVQTPLIVRFSTVIHERGSPETIRDPRGFAVKMYTRGGNWDLVGNNFPVFFIRDGTQFPDVIHAFKPNPKSHIQENWRILDYLSHLPESLNTFAWFYDDVGIPTDYRHMEGFGVHTFTMINKEGKANYVKFHWKPTCGVKCLLEEEAIRIGGENHSHATQDLYESIAAGNYPEWKLYIQVM 274          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA2_HORVU (Catalase isozyme 2 OS=Hordeum vulgare GN=CAT2 PE=2 SV=1)

HSP 1 Score: 369.392 bits (947), Expect = 9.785e-102
Identity = 161/206 (78.16%), Postives = 187/206 (90.78%), Query Frame = 1
Query:    1 ASAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            ASAK FFE THDV+ LTCADFLRAPG +TPVIVRFSTVIHERGSPET+RDPRGFAVKFYTREGN+DL+GNNFPVFF+RDG+KFPD++HA KPNPKSH+QE WR+ DF SHHPESLH F FLFDDVG+P DYRHM+G GVNTY  +++AGK+HYVKFHW+PTCGV CL++DEA  VGG NHSHATQDLYDSI +GN+PEWKL++Q++
Sbjct:   69 ASAKGFFECTHDVTGLTCADFLRAPGARTPVIVRFSTVIHERGSPETIRDPRGFAVKFYTREGNWDLLGNNFPVFFIRDGIKFPDVIHAFKPNPKSHVQEYWRVFDFLSHHPESLHTFFFLFDDVGIPTDYRHMDGFGVNTYTFVSRAGKSHYVKFHWRPTCGVSCLMDDEATLVGGKNHSHATQDLYDSIDAGNFPEWKLFVQVI 274          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA1_ORYSJ (Catalase isozyme A OS=Oryza sativa subsp. japonica GN=CATA PE=2 SV=1)

HSP 1 Score: 364.77 bits (935), Expect = 2.410e-100
Identity = 159/206 (77.18%), Postives = 185/206 (89.81%), Query Frame = 1
Query:    1 ASAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            ASAK FFE THDV+++TCADFLR+PG QTPVIVRFSTVIHERGSPET+RDPRGFAVKFYTREGN+DL+GNNFPVFF+RDG+KFPD++HA KPNP+SH+QE WR+ DF SHHPESLH F FLFDDVG+P DYRHM+G GVNTY  + +  KA YVKFHWKPTCGV CL++DEA  VGG NHSHATQDLYDSIA+GN+PEWKL++Q++
Sbjct:   69 ASAKGFFECTHDVTDITCADFLRSPGAQTPVIVRFSTVIHERGSPETIRDPRGFAVKFYTREGNWDLLGNNFPVFFIRDGIKFPDVIHAFKPNPRSHVQEYWRVFDFLSHHPESLHTFFFLFDDVGIPTDYRHMDGFGVNTYTFVTRDAKARYVKFHWKPTCGVSCLMDDEATLVGGKNHSHATQDLYDSIAAGNFPEWKLFVQVI 274          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA1_ORYSI (Catalase isozyme A OS=Oryza sativa subsp. indica PE=2 SV=1)

HSP 1 Score: 364.77 bits (935), Expect = 2.410e-100
Identity = 159/206 (77.18%), Postives = 185/206 (89.81%), Query Frame = 1
Query:    1 ASAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            ASAK FFE THDV+++TCADFLR+PG QTPVIVRFSTVIHERGSPET+RDPRGFAVKFYTREGN+DL+GNNFPVFF+RDG+KFPD++HA KPNP+SH+QE WR+ DF SHHPESLH F FLFDDVG+P DYRHM+G GVNTY  + +  KA YVKFHWKPTCGV CL++DEA  VGG NHSHATQDLYDSIA+GN+PEWKL++Q++
Sbjct:   69 ASAKGFFECTHDVTDITCADFLRSPGAQTPVIVRFSTVIHERGSPETIRDPRGFAVKFYTREGNWDLLGNNFPVFFIRDGIKFPDVIHAFKPNPRSHVQEYWRVFDFLSHHPESLHTFFFLFDDVGIPTDYRHMDGFGVNTYTFVTRDAKARYVKFHWKPTCGVSCLMDDEATLVGGKNHSHATQDLYDSIAAGNFPEWKLFVQVI 274          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_CAPAN (Catalase OS=Capsicum annuum GN=CAT PE=2 SV=1)

HSP 1 Score: 363.229 bits (931), Expect = 7.013e-100
Identity = 171/224 (76.34%), Postives = 188/224 (83.93%), Query Frame = 1
Query:    1 ASAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIMXXXXXXXXXXXXXXVTKT 672
            ASAK FFEVTHD+S+LTCADFLRAPGVQTPVI RFSTV+HERGSPE++RD RGFAVKFYTREGNFDLVGNN PVFF RD   FPD + ALKPNPKSHIQENWRI+DFFS  PESLH F+F +DDV +P DYRHMEG GV+ Y LINKAGKAHYVKFHWKPTCGVK + E+EAI+VGG NHSHAT+DLYDSIA+GNYPEWKL+IQIM              VTKT
Sbjct:   69 ASAKGFFEVTHDISHLTCADFLRAPGVQTPVICRFSTVVHERGSPESIRDIRGFAVKFYTREGNFDLVGNNVPVFFNRDAKSFPDTIRALKPNPKSHIQENWRILDFFSFLPESLHTFAFFYDDVCLPTDYRHMEGFGVHAYQLINKAGKAHYVKFHWKPTCGVKSMTEEEAIRVGGTNHSHATKDLYDSIAAGNYPEWKLFIQIMNPEDVDKFDFDPLDVTKT 292          
The following BLAST results are available for this feature:
BLAST of FC868871 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CATA2_RICCO3.250e-10585.37Catalase isozyme 2 OS=Ricinus communis GN=CAT2 PE=... [more]
CATA1_HORVU3.250e-10578.57Catalase isozyme 1 OS=Hordeum vulgare GN=CAT1 PE=2... [more]
CATA_AVIMR1.235e-10482.52Catalase OS=Avicennia marina PE=2 SV=1[more]
CATA2_WHEAT2.751e-10478.13Catalase OS=Triticum aestivum GN=CATA PE=2 SV=1[more]
CATA2_MAIZE1.510e-10281.55Catalase isozyme 2 OS=Zea mays GN=CAT2 PE=2 SV=3[more]
CATA_IPOBA3.363e-10280.10Catalase OS=Ipomoea batatas PE=2 SV=1[more]
CATA2_HORVU9.785e-10278.16Catalase isozyme 2 OS=Hordeum vulgare GN=CAT2 PE=2... [more]
CATA1_ORYSJ2.410e-10077.18Catalase isozyme A OS=Oryza sativa subsp. japonica... [more]
CATA1_ORYSI2.410e-10077.18Catalase isozyme A OS=Oryza sativa subsp. indica P... [more]
CATA_CAPAN7.013e-10076.34Catalase OS=Capsicum annuum GN=CAT PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC31005H02EF AbioticL1 Citrus clementina cDNA clone C31005H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868871 ID=FC868871; Name=FC868871; organism=Citrus clementina; type=EST; length=678bp
GCCAGTGCTAAGGTCTTCTTTGAGGTCACCCATGATGTTTCTAACCTTAC
TTGTGCTGATTTCCTTCGAGCCCCAGGGGTTCAGACGCCTGTCATTGTCC
GCTTCTCCACTGTTATCCATGAGCGTGGCAGCCCTGAAACCCTGAGAGAT
CCTCGAGGATTTGCGGTCAAGTTTTACACCAGAGAGGGTAATTTTGATCT
TGTGGGAAACAATTTCCCCGTCTTTTTTGTCCGTGATGGAATGAAATTCC
CTGACATGGTCCATGCGCTTAAACCTAACCCAAAGTCTCACATCCAAGAG
AACTGGAGGATTGTTGACTTCTTCTCCCATCATCCTGAAAGCTTGCACAT
GTTCTCCTTCTTGTTTGATGATGTGGGTGTCCCACGAGATTACAGGCACA
TGGAAGGATCTGGTGTTAACACTTACATGCTGATCAATAAGGCTGGGAAA
GCACATTATGTGAAATTTCATTGGAAACCCACTTGTGGGGTTAAGTGTTT
ATTGGAAGATGAGGCAATCAAGGTTGGAGGAGCCAACCACAGCCATGCTA
CTCAAGATCTTTATGACTCAATTGCATCTGGAAACTATCCTGAGTGGAAA
CTCTACATCCAGATTATGGATCCCGACCATGAGGACNAATTTGACTTTGA
CCCACTTGATGTAACCAAGACTGGCCTG
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