FC868871

Overview
NameFC868871
Unique NameFC868871
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length678
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10922 contig Ccv1_Contig10922:306..983. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA1_TOBAC (Catalase isozyme 1 OS=Nicotiana tabacum GN=CAT-1 PE=1 SV=2)

HSP 1 Score: 362.459 bits (929), Expect = 1.196e-99
Identity = 171/224 (76.34%), Postives = 188/224 (83.93%), Query Frame = 1
Query:    1 ASAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIMXXXXXXXXXXXXXXVTKT 672
            ASAK FFEVTHD+S+LTCADFLRAPGVQTPVI RFSTV+HERGSPE+LRD RGFAVKFYTREGNFDLVGNN PVFF RD   FPD + ALKPNPKSHIQE W+I+DFFS  PESLH F++ FDDV +P DYRHMEG GV+ Y LINKAGKAHYVKFHWKPTCGVKC+ E+EAI+VGG NHSHAT+DLYDSIA+GNYPEWKL+IQIM              VTKT
Sbjct:   69 ASAKGFFEVTHDISHLTCADFLRAPGVQTPVICRFSTVVHERGSPESLRDIRGFAVKFYTREGNFDLVGNNVPVFFNRDAKSFPDTIRALKPNPKSHIQEYWKILDFFSFLPESLHTFAWFFDDVCLPTDYRHMEGYGVHAYQLINKAGKAHYVKFHWKPTCGVKCMSEEEAIRVGGTNHSHATKDLYDSIAAGNYPEWKLFIQIMDTEDVDKFDFDPLDVTKT 292          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_SECCE (Catalase OS=Secale cereale PE=2 SV=1)

HSP 1 Score: 361.688 bits (927), Expect = 2.040e-99
Identity = 157/206 (76.21%), Postives = 183/206 (88.83%), Query Frame = 1
Query:    1 ASAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            ASAK FFE THDV+ LTCADFL +PG  TPVIVRFSTVIHERGSPET+RDPRGFAVKFYTREGN+DL+GNNFPVFF+RDG+KFPD++HA KPNPKSH+QE WR+ DF  HHPESLH F FLFDDVG+P DYRHM+G GVNTY  + +AGK+HY+KFHW+PTCGV CL++DEA  VGG NHSHATQDLYDSI +GN+PEWKL++Q++
Sbjct:   68 ASAKGFFECTHDVTGLTCADFLPSPGAGTPVIVRFSTVIHERGSPETIRDPRGFAVKFYTREGNWDLLGNNFPVFFIRDGIKFPDVIHAFKPNPKSHVQEYWRVFDFLPHHPESLHTFFFLFDDVGIPTDYRHMDGFGVNTYTFVTRAGKSHYIKFHWRPTCGVSCLMDDEATLVGGKNHSHATQDLYDSIDAGNFPEWKLFVQVI 273          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA3_MAIZE (Catalase isozyme 3 OS=Zea mays GN=CAT3 PE=2 SV=2)

HSP 1 Score: 361.688 bits (927), Expect = 2.040e-99
Identity = 164/207 (79.23%), Postives = 186/207 (89.86%), Query Frame = 1
Query:    1 ASAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLED-EAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            ASAK FFE THDV++LTCADFLRAPGV+TPVIVRFSTVIHERGSPET+RDPRGFAVKFYTREGN+DL+GNNFPVFF+RDG+KFPD++HA KPNP+SH+QE WR+ DF SH PESLH F FLFDDVGVP DYRHMEG GVNTY  ++ AGKA YVKFHWKPTCGV+C+L D EA  VGG NHSHATQDLYDSIA+G++PEW LY+Q+M
Sbjct:   71 ASAKGFFECTHDVTSLTCADFLRAPGVRTPVIVRFSTVIHERGSPETIRDPRGFAVKFYTREGNWDLLGNNFPVFFIRDGIKFPDVIHAFKPNPRSHVQEYWRVFDFLSHLPESLHTFFFLFDDVGVPSDYRHMEGFGVNTYTFVSAAGKAQYVKFHWKPTCGVRCILTDEEAALVGGRNHSHATQDLYDSIAAGSFPEWTLYVQVM 277          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA1_SOLLC (Catalase isozyme 1 OS=Solanum lycopersicum GN=CAT1 PE=2 SV=1)

HSP 1 Score: 361.303 bits (926), Expect = 2.665e-99
Identity = 169/224 (75.45%), Postives = 186/224 (83.04%), Query Frame = 1
Query:    1 ASAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIMXXXXXXXXXXXXXXVTKT 672
            ASAK FFEVTHD+S+LTCADFLRAPG QTPVI RFSTV+HERGSPE++RD RGFAVKFYTREGNFDLVGNN PVFF RD   FPD + ALKPNPKSHIQENWRI+DFFS  PESLH F+F +DDV +P DYRHMEG GV+ Y LINK GKAHYVKFHWKPTCGVKC+ E+EAI+VGG NHSHAT+DLYDSIA+GNYPEWKL+IQ M              VTKT
Sbjct:   69 ASAKGFFEVTHDISHLTCADFLRAPGAQTPVICRFSTVVHERGSPESIRDIRGFAVKFYTREGNFDLVGNNVPVFFNRDAKSFPDTIRALKPNPKSHIQENWRILDFFSFLPESLHTFAFFYDDVCLPTDYRHMEGFGVHAYQLINKEGKAHYVKFHWKPTCGVKCMSEEEAIRVGGTNHSHATKDLYDSIAAGNYPEWKLFIQTMDPEDVDKFDFDPLDVTKT 292          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_SOLME (Catalase OS=Solanum melongena PE=2 SV=1)

HSP 1 Score: 360.918 bits (925), Expect = 3.480e-99
Identity = 171/224 (76.34%), Postives = 188/224 (83.93%), Query Frame = 1
Query:    1 ASAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIMXXXXXXXXXXXXXXVTKT 672
            ASAK FFEVTHDVS+LTCADFLRAPGVQTPVI RFSTV+HERGSPE++RD RGFAVKFYTREGNFDLVGNN PVFF RD   FPD + ALKPNPKSHIQENWRI+DFFS  PESLH F+F +DDV +P +YRHMEG GV+ Y LINKAGKAHYVKFHWKPTCGVK + E+EAI+VGG NHSHAT+DLYDSIA+GNYPEWKL+IQIM              VTKT
Sbjct:   69 ASAKGFFEVTHDVSHLTCADFLRAPGVQTPVICRFSTVVHERGSPESIRDIRGFAVKFYTREGNFDLVGNNVPVFFNRDAKSFPDTIRALKPNPKSHIQENWRILDFFSFLPESLHTFAFFYDDVCLPINYRHMEGFGVHAYQLINKAGKAHYVKFHWKPTCGVKSMTEEEAIRVGGTNHSHATKDLYDSIAAGNYPEWKLFIQIMDPEDVDKFDFDPLDVTKT 292          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA3_CUCPE (Catalase isozyme 3 OS=Cucurbita pepo GN=CAT3 PE=2 SV=1)

HSP 1 Score: 358.992 bits (920), Expect = 1.323e-98
Identity = 163/204 (79.90%), Postives = 185/204 (90.69%), Query Frame = 1
Query:    1 ASAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQ 612
            ASAK FFEVTHD+SNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRD M+FPD++ A KPNPKSH+QE WR +DF S+HPESL  F++ +DDVG+P +YRHMEG GV  Y LINK+GKA  VKFHWKPTCGVK ++E+EAI++GG NHSHATQDLY+SIA+GN+PEW+LYIQ
Sbjct:   69 ASAKGFFEVTHDISNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDAMQFPDVIRAFKPNPKSHLQEPWRYLDFCSYHPESLLSFAWFYDDVGIPINYRHMEGFGVQAYSLINKSGKARLVKFHWKPTCGVKSMMEEEAIRIGGTNHSHATQDLYESIAAGNFPEWRLYIQ 272          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA2_SOLTU (Catalase isozyme 2 OS=Solanum tuberosum GN=CAT2 PE=3 SV=1)

HSP 1 Score: 357.451 bits (916), Expect = 3.848e-98
Identity = 168/224 (75.00%), Postives = 185/224 (82.59%), Query Frame = 1
Query:    1 ASAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIMXXXXXXXXXXXXXXVTKT 672
            ASAK FFEVTHD+S+LTCADFLRAPG QTPVI RFSTV+HERGSPE++RD RGFAVKFYTREGNFDLVGNN PVFF RD   FPD + ALKPNPKSHIQENWRI+DFFS  PESLH F+F +DDV +P DYRHMEG GV+ Y LINK GKAHYVKFHWKPTCGVK + E+EAI+VGG NHSHAT+DLYDSIA+GNYPEWKL+IQ M              VTKT
Sbjct:   69 ASAKGFFEVTHDISHLTCADFLRAPGAQTPVICRFSTVVHERGSPESIRDIRGFAVKFYTREGNFDLVGNNVPVFFNRDAKSFPDTIRALKPNPKSHIQENWRILDFFSFLPESLHTFAFFYDDVCLPTDYRHMEGFGVHAYQLINKEGKAHYVKFHWKPTCGVKSMSEEEAIRVGGTNHSHATKDLYDSIAAGNYPEWKLFIQTMDPEDVDKFDFDPLDVTKT 292          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA2_NICPL (Catalase isozyme 2 OS=Nicotiana plumbaginifolia GN=CAT2 PE=2 SV=1)

HSP 1 Score: 356.295 bits (913), Expect = 8.572e-98
Identity = 167/206 (81.07%), Postives = 182/206 (88.35%), Query Frame = 1
Query:    1 ASAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            ASAK FFEVTHD+S+LTCADFLRAPGVQTPVIVRFSTV+HERGSPE+LRD RGFAVKFYTREGNFDLVGNN PVFF RD   FPD + ALKPNPKSHIQE WRI+DFFS  PESLH F++ FDDV +P +YRHMEG GV+ Y LINKAGKAHYVKFHWKPTCGVKC+ E+EAI+VGG NHSHAT+DLYDSIA GNYPEWKL I IM
Sbjct:   69 ASAKGFFEVTHDISHLTCADFLRAPGVQTPVIVRFSTVVHERGSPESLRDIRGFAVKFYTREGNFDLVGNNVPVFFNRDAKSFPDTIRALKPNPKSHIQEYWRILDFFSFLPESLHTFAWFFDDVCLPINYRHMEGYGVHAYQLINKAGKAHYVKFHWKPTCGVKCMTEEEAIRVGGTNHSHATKDLYDSIAVGNYPEWKLSIHIM 274          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA2_CUCPE (Catalase isozyme 2 OS=Cucurbita pepo GN=CAT2 PE=2 SV=1)

HSP 1 Score: 355.525 bits (911), Expect = 1.462e-97
Identity = 163/204 (79.90%), Postives = 186/204 (91.18%), Query Frame = 1
Query:    1 ASAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQ 612
            ASAK FFEVTHDVS+L+CADFLRAPGVQTPVIVRFSTVIHER SPET+RDPRGFAVKFYTREGNFDLVGNNFPVFFVRD M+FPD++ A KPNPKSH+QE+WR +DF S+HPESL  F++ +DDVG+P +YRHMEG GV  Y LINKAGKA  VKFHWKPTCGVK +LE+EAI+VGG+NHSHATQDLY+SIA+GN+PEW+LYIQ
Sbjct:   69 ASAKGFFEVTHDVSDLSCADFLRAPGVQTPVIVRFSTVIHERVSPETVRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDAMQFPDVIRAFKPNPKSHLQESWRFLDFCSYHPESLLSFAWFYDDVGIPINYRHMEGFGVQAYSLINKAGKARLVKFHWKPTCGVKSMLEEEAIRVGGSNHSHATQDLYESIAAGNFPEWRLYIQ 272          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA1_SOLTU (Catalase isozyme 1 OS=Solanum tuberosum GN=CAT1 PE=2 SV=1)

HSP 1 Score: 351.288 bits (900), Expect = 2.758e-96
Identity = 164/224 (73.21%), Postives = 182/224 (81.25%), Query Frame = 1
Query:    1 ASAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIMXXXXXXXXXXXXXXVTKT 672
            ASAK FFEVTHD+S+LTCADFLRAPG QTPVI RFSTV+HERGSPE++RD RGF VKFY R GNFDLVGNN PVFF RD   FPD + ALKPNPKSHIQE+WR +DFFS  PESLH F+F +DDV +P DYRHMEG GV+ Y LINK GKAHYVKFHWKPTCGVKC+ E+EAI+VGG NHSHAT+DLYDSIA+GNYPEWKL+IQ M              VTKT
Sbjct:   69 ASAKGFFEVTHDISHLTCADFLRAPGAQTPVICRFSTVVHERGSPESIRDIRGFGVKFYNRGGNFDLVGNNVPVFFNRDAKSFPDTIRALKPNPKSHIQEDWRTLDFFSFLPESLHTFAFFYDDVCLPTDYRHMEGFGVHAYQLINKEGKAHYVKFHWKPTCGVKCMSEEEAIRVGGTNHSHATKDLYDSIAAGNYPEWKLFIQTMDPEDVDKFDFDPLDVTKT 292          
The following BLAST results are available for this feature:
BLAST of FC868871 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CATA1_TOBAC1.196e-9976.34Catalase isozyme 1 OS=Nicotiana tabacum GN=CAT-1 P... [more]
CATA_SECCE2.040e-9976.21Catalase OS=Secale cereale PE=2 SV=1[more]
CATA3_MAIZE2.040e-9979.23Catalase isozyme 3 OS=Zea mays GN=CAT3 PE=2 SV=2[more]
CATA1_SOLLC2.665e-9975.45Catalase isozyme 1 OS=Solanum lycopersicum GN=CAT1... [more]
CATA_SOLME3.480e-9976.34Catalase OS=Solanum melongena PE=2 SV=1[more]
CATA3_CUCPE1.323e-9879.90Catalase isozyme 3 OS=Cucurbita pepo GN=CAT3 PE=2 ... [more]
CATA2_SOLTU3.848e-9875.00Catalase isozyme 2 OS=Solanum tuberosum GN=CAT2 PE... [more]
CATA2_NICPL8.572e-9881.07Catalase isozyme 2 OS=Nicotiana plumbaginifolia GN... [more]
CATA2_CUCPE1.462e-9779.90Catalase isozyme 2 OS=Cucurbita pepo GN=CAT2 PE=2 ... [more]
CATA1_SOLTU2.758e-9673.21Catalase isozyme 1 OS=Solanum tuberosum GN=CAT1 PE... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31005H02EF AbioticL1 Citrus clementina cDNA clone C31005H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868871 ID=FC868871; Name=FC868871; organism=Citrus clementina; type=EST; length=678bp
GCCAGTGCTAAGGTCTTCTTTGAGGTCACCCATGATGTTTCTAACCTTAC
TTGTGCTGATTTCCTTCGAGCCCCAGGGGTTCAGACGCCTGTCATTGTCC
GCTTCTCCACTGTTATCCATGAGCGTGGCAGCCCTGAAACCCTGAGAGAT
CCTCGAGGATTTGCGGTCAAGTTTTACACCAGAGAGGGTAATTTTGATCT
TGTGGGAAACAATTTCCCCGTCTTTTTTGTCCGTGATGGAATGAAATTCC
CTGACATGGTCCATGCGCTTAAACCTAACCCAAAGTCTCACATCCAAGAG
AACTGGAGGATTGTTGACTTCTTCTCCCATCATCCTGAAAGCTTGCACAT
GTTCTCCTTCTTGTTTGATGATGTGGGTGTCCCACGAGATTACAGGCACA
TGGAAGGATCTGGTGTTAACACTTACATGCTGATCAATAAGGCTGGGAAA
GCACATTATGTGAAATTTCATTGGAAACCCACTTGTGGGGTTAAGTGTTT
ATTGGAAGATGAGGCAATCAAGGTTGGAGGAGCCAACCACAGCCATGCTA
CTCAAGATCTTTATGACTCAATTGCATCTGGAAACTATCCTGAGTGGAAA
CTCTACATCCAGATTATGGATCCCGACCATGAGGACNAATTTGACTTTGA
CCCACTTGATGTAACCAAGACTGGCCTG
back to top