FC868871

Overview
NameFC868871
Unique NameFC868871
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length678
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA3_ARATH (Catalase-3 OS=Arabidopsis thaliana GN=CAT3 PE=1 SV=3)

HSP 1 Score: 345.51 bits (885), Expect = 1.513e-94
Identity = 159/205 (77.56%), Postives = 185/205 (90.24%), Query Frame = 1
Query:    4 SAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            SAK FFEVTHD+SNLTCADFLRAPGVQTPVIVRFSTV+HER SPET+RD RGFAVKFYTREGNFDLVGNN PVFF+RDG++FPD+VHALKPNPK++IQE WRI+D+ SH PESL  + ++FDDVG+P+DYRHMEG GV+TY LI K+GK  +VKFHWKPTCG+K L ++EA  VGGANHSHAT+DL+D+IASGNYPEWKL+IQ M
Sbjct:   70 SAKGFFEVTHDISNLTCADFLRAPGVQTPVIVRFSTVVHERASPETMRDIRGFAVKFYTREGNFDLVGNNTPVFFIRDGIQFPDVVHALKPNPKTNIQEYWRILDYMSHLPESLLTWCWMFDDVGIPQDYRHMEGFGVHTYTLIAKSGKVLFVKFHWKPTCGIKNLTDEEAKVVGGANHSHATKDLHDAIASGNYPEWKLFIQTM 274          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_VIBCH (Catalase OS=Vibrio cholerae GN=VC_1585 PE=3 SV=2)

HSP 1 Score: 240.35 bits (612), Expect = 6.856e-63
Identity = 109/200 (54.50%), Postives = 145/200 (72.50%), Query Frame = 1
Query:   19 FEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            F  + D S+LT +    + G  TPV VRFSTVIH +GSPETLRDPRGFA KFYT +GN+DLVGNN PVFF+RD +KFPDMVH+LKP+P +++Q+  R  DFFSH P S HM ++++ ++G P  YR M+G GV+ Y  IN+ G  +YVKFHWK   G++ L  DE +KV G + +H T DLY  I +GN+P+W LY+Q++
Sbjct:   82 FVASGDFSDLTLSAPFTSKGKITPVFVRFSTVIHSKGSPETLRDPRGFATKFYTEQGNWDLVGNNLPVFFIRDSIKFPDMVHSLKPSPVTNLQDPNRFFDFFSHEPGSTHMLTWVYTNLGTPASYRTMDGFGVHAYKWINQKGDVNYVKFHWKSLQGIESLRPDEVVKVQGQDFNHLTNDLYTQINAGNHPKWDLYVQVL 281          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_VIBVU (Catalase OS=Vibrio vulnificus GN=VV2_1473 PE=3 SV=2)

HSP 1 Score: 232.261 bits (591), Expect = 1.867e-60
Identity = 107/200 (53.50%), Postives = 143/200 (71.50%), Query Frame = 1
Query:   19 FEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            F V+ D S+LT +      G  TPV VRFSTVIH +GSPETLRDPRGFA KFYT +GN+DLVGNN PVFF+RD +KFPDMVH+LKP+P +++Q+  R  DFFS  P + +M ++++ ++G P  YR M+G GV+ Y  IN+ G+ +YVKFHWK   GVK L   E  KV G + +H T DLY  I +GN+P+W LY++++
Sbjct:   82 FVVSGDFSDLTLSSPFAQSGKVTPVFVRFSTVIHSKGSPETLRDPRGFATKFYTDQGNWDLVGNNLPVFFIRDSIKFPDMVHSLKPSPVTNLQDPNRFFDFFSSQPSATNMLTWVYTNLGTPASYRTMDGFGVHAYKWINRKGEVNYVKFHWKSQQGVKSLRPAEVTKVQGEDFNHLTNDLYTQINAGNFPKWDLYVKVL 281          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATX_BACSU (Catalase X OS=Bacillus subtilis GN=katX PE=3 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 2.438e-60
Identity = 106/194 (54.64%), Postives = 143/194 (73.71%), Query Frame = 1
Query:   37 VSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            +S  T A   +  G +TP  VRFSTV H + SPETLRDPRGFAVK YT +GN+DLVGNN  +FF+RD +KFPD+VHA +P+P ++IQ+  RI DF S  PE+ HM +FLF   G+P +YR M+GSGV+ Y  +N+ GKA  VK+H++P  G++ L + EA ++ G N +HATQDLYD+I +G+YPEW++Y QIM
Sbjct:  104 ISTYTRAKLFQEKGKKTPAFVRFSTVNHGKHSPETLRDPRGFAVKLYTEDGNWDLVGNNLKIFFIRDPLKFPDLVHAFQPDPVTNIQDGERIFDFISQSPEATHMITFLFSPWGIPANYRQMQGSGVHAYKWVNEEGKAVLVKYHFEPKQGIRNLTQKEAEEIQGKNFNHATQDLYDAIENGDYPEWEVYAQIM 297          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_VIBPA (Catalase OS=Vibrio parahaemolyticus GN=VPA0305 PE=3 SV=2)

HSP 1 Score: 231.491 bits (589), Expect = 3.185e-60
Identity = 104/200 (52.00%), Postives = 142/200 (71.00%), Query Frame = 1
Query:   19 FEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            F  + D S+LT +      G  TPV VRFSTVIH +GSPETLRDPRGFA KFYT +GN+DLVGNN PVFF+RD +KFPDMVH+LKP+P +++Q+  R  DFFSH P + HM ++++ ++G P  YR M+G GV+ Y  IN+ G  +YVKF WK   G+K L  ++  ++ G + +H T DLY +I  GNYP+W LY++++
Sbjct:   82 FVASGDFSDLTVSAPFTEKGKVTPVFVRFSTVIHSKGSPETLRDPRGFATKFYTEQGNWDLVGNNLPVFFIRDSIKFPDMVHSLKPSPVTNVQDPNRFFDFFSHEPSATHMLTWVYSNLGTPASYRTMDGFGVHAYKWINQQGDVNYVKFQWKSQQGIKSLRPNKVTEMQGKDFNHLTNDLYAAIGRGNYPKWDLYVKVL 281          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA1_CAEEL (Peroxisomal catalase 1 OS=Caenorhabditis elegans GN=ctl-2 PE=2 SV=3)

HSP 1 Score: 230.72 bits (587), Expect = 5.432e-60
Identity = 105/206 (50.97%), Postives = 148/206 (71.84%), Query Frame = 1
Query:    1 ASAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            A A  +FEVTHD+S    AD     G QTP+++RFSTV  E GS +T RDPRGFA+KFYT EGN+DLVGNN P+FF+RD + FP+ +H  K NP++H+++   I DF+ H PE+LH   FLF D G+P  YRHM G G +T+ ++NK GKA YVKFH+KPT GVK L  ++A ++  ++  ++ +DL+++I  G++P WK++IQ+M
Sbjct:   75 AGAHGYFEVTHDISKYCKADIFNKVGKQTPLLIRFSTVGGESGSADTARDPRGFAIKFYTEEGNWDLVGNNTPIFFIRDPIHFPNFIHTQKRNPQTHLKDPNMIFDFWLHRPEALHQVMFLFSDRGLPDGYRHMNGYGSHTFKMVNKDGKAIYVKFHFKPTQGVKNLTVEKAGQLASSDPDYSIRDLFNAIEKGDFPVWKMFIQVM 280          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_VIBVY (Catalase OS=Vibrio vulnificus (strain YJ016) GN=VVA0294 PE=3 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 7.094e-60
Identity = 106/200 (53.00%), Postives = 142/200 (71.00%), Query Frame = 1
Query:   19 FEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            F  + D S+LT +      G  TPV VRFSTVIH +GSPETLRDPRGFA KFYT +GN+DLVGNN PVFF+RD +KFPDMVH+LKP+P +++Q+  R  DFFS  P + +M ++++ ++G P  YR M+G GV+ Y  IN+ G+ +YVKFHWK   GVK L   E  KV G + +H T DLY  I +GN+P+W LY++++
Sbjct:   82 FVASGDFSDLTLSSPFAQSGKVTPVFVRFSTVIHSKGSPETLRDPRGFATKFYTDQGNWDLVGNNLPVFFIRDSIKFPDMVHSLKPSPVTNLQDPNRFFDFFSSQPSATNMLTWVYTNLGTPASYRTMDGFGVHAYKWINQKGEVNYVKFHWKSQQGVKSLRPAEVTKVQGEDFNHLTNDLYTQINAGNFPKWDLYVKVL 281          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_DEIRA (Catalase OS=Deinococcus radiodurans GN=katA PE=1 SV=2)

HSP 1 Score: 226.868 bits (577), Expect = 7.844e-59
Identity = 104/194 (53.61%), Postives = 139/194 (71.65%), Query Frame = 1
Query:   37 VSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            VS  T A   +  G +TPV VRFSTV H   SPETLRDPRGFAVKFYT +GN+DLVGNN  +FF+RD +KFPD++H+ KP+P ++IQ   RI DFF+  PE+ HM + L+   G+P  YR M+GSGVNTY  +N  G+   VK+HW+P  GV+ L + +A +V   N +HATQDL+D+I  G++P+W L++QIM
Sbjct:  102 VSKYTRAKLFQEDGKETPVFVRFSTVGHGTHSPETLRDPRGFAVKFYTEDGNWDLVGNNLKIFFIRDALKFPDLIHSQKPSPTTNIQSQERIFDFFAGSPEATHMITLLYSPWGIPASYRFMQGSGVNTYKWVNDQGEGVLVKYHWEPVQGVRNLTQMQADEVQATNFNHATQDLHDAIERGDFPQWDLFVQIM 295          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATB_PSEAE (Catalase OS=Pseudomonas aeruginosa GN=katB PE=3 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 2.282e-58
Identity = 104/200 (52.00%), Postives = 139/200 (69.50%), Query Frame = 1
Query:   19 FEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            F  + D+S+L+ A   R  G +TPV VRFS V+H   SPETLRDPRGFA KFYT +GN+DLVGNNFP FF+RD +KFPDMVHA KP+P+S++ ++ R  DFFSH PE+    + L+ + G P  YR M+G+ V+ Y L+N  G+ HYVKFHWK   G K L   +  +V G ++SH T DL  +I  G++P+W LYIQ++
Sbjct:   91 FVASADISDLSMAKVFRK-GEKTPVFVRFSAVVHGNHSPETLRDPRGFATKFYTADGNWDLVGNNFPTFFIRDAIKFPDMVHAFKPDPRSNLDDDSRRFDFFSHVPEATRTLTLLYSNEGTPASYREMDGNSVHAYKLVNARGEVHYVKFHWKSLQGQKNLDPKQVAEVQGRDYSHMTNDLVSAIRKGDFPKWDLYIQVL 289          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_LISSE (Catalase OS=Listeria seeligeri GN=kat PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 8.672e-58
Identity = 103/206 (50.00%), Postives = 140/206 (67.96%), Query Frame = 1
Query:    1 ASAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            A A   F     +   T A FL+  G +T V  RFSTVIH + SPETLRDPRGF+VKFYT EGN+D VGNN PVFF+RD +KFPD++H+LKP+P+++IQ+  R  DFFS  PE+  M ++LF D G P  YR + GS V+ +  IN+ GK  YVK  W P  G+  L  D+A ++     +HA++DLY++I +G+YPEW LY+Q++
Sbjct:   59 AGAHGKFVTKKSMKKYTKAQFLQEEGTETEVFARFSTVIHGQHSPETLRDPRGFSVKFYTEEGNYDFVGNNLPVFFIRDAIKFPDVIHSLKPDPRTNIQDGNRYWDFFSLTPEATTMITYLFSDEGTPASYREIRGSSVHAFKWINEEGKTVYVKLRWVPKAGIVNLSTDQAAQIQAKEFNHASRDLYEAIENGDYPEWDLYVQVL 264          
The following BLAST results are available for this feature:
BLAST of FC868871 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CATA3_ARATH1.513e-9477.56Catalase-3 OS=Arabidopsis thaliana GN=CAT3 PE=1 SV... [more]
CATA_VIBCH6.856e-6354.50Catalase OS=Vibrio cholerae GN=VC_1585 PE=3 SV=2[more]
CATA_VIBVU1.867e-6053.50Catalase OS=Vibrio vulnificus GN=VV2_1473 PE=3 SV=... [more]
CATX_BACSU2.438e-6054.64Catalase X OS=Bacillus subtilis GN=katX PE=3 SV=1[more]
CATA_VIBPA3.185e-6052.00Catalase OS=Vibrio parahaemolyticus GN=VPA0305 PE=... [more]
CATA1_CAEEL5.432e-6050.97Peroxisomal catalase 1 OS=Caenorhabditis elegans G... [more]
CATA_VIBVY7.094e-6053.00Catalase OS=Vibrio vulnificus (strain YJ016) GN=VV... [more]
CATA_DEIRA7.844e-5953.61Catalase OS=Deinococcus radiodurans GN=katA PE=1 S... [more]
CATB_PSEAE2.282e-5852.00Catalase OS=Pseudomonas aeruginosa GN=katB PE=3 SV... [more]
CATA_LISSE8.672e-5850.00Catalase OS=Listeria seeligeri GN=kat PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC31005H02EF AbioticL1 Citrus clementina cDNA clone C31005H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868871 ID=FC868871; Name=FC868871; organism=Citrus clementina; type=EST; length=678bp
GCCAGTGCTAAGGTCTTCTTTGAGGTCACCCATGATGTTTCTAACCTTAC
TTGTGCTGATTTCCTTCGAGCCCCAGGGGTTCAGACGCCTGTCATTGTCC
GCTTCTCCACTGTTATCCATGAGCGTGGCAGCCCTGAAACCCTGAGAGAT
CCTCGAGGATTTGCGGTCAAGTTTTACACCAGAGAGGGTAATTTTGATCT
TGTGGGAAACAATTTCCCCGTCTTTTTTGTCCGTGATGGAATGAAATTCC
CTGACATGGTCCATGCGCTTAAACCTAACCCAAAGTCTCACATCCAAGAG
AACTGGAGGATTGTTGACTTCTTCTCCCATCATCCTGAAAGCTTGCACAT
GTTCTCCTTCTTGTTTGATGATGTGGGTGTCCCACGAGATTACAGGCACA
TGGAAGGATCTGGTGTTAACACTTACATGCTGATCAATAAGGCTGGGAAA
GCACATTATGTGAAATTTCATTGGAAACCCACTTGTGGGGTTAAGTGTTT
ATTGGAAGATGAGGCAATCAAGGTTGGAGGAGCCAACCACAGCCATGCTA
CTCAAGATCTTTATGACTCAATTGCATCTGGAAACTATCCTGAGTGGAAA
CTCTACATCCAGATTATGGATCCCGACCATGAGGACNAATTTGACTTTGA
CCCACTTGATGTAACCAAGACTGGCCTG
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