FC868871

Overview
NameFC868871
Unique NameFC868871
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length678
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10922 contig Ccv1_Contig10922:306..983. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATB_PSESY (Catalase OS=Pseudomonas syringae pv. syringae GN=katB PE=1 SV=2)

HSP 1 Score: 222.631 bits (566), Expect = 1.479e-57
Identity = 101/200 (50.50%), Postives = 140/200 (70.00%), Query Frame = 1
Query:   19 FEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            F  + D+S+L+ A   ++ G +TPV VRFS+V+H   SPETLRDP GFA KFYT +GN+DLVGNNFP FF+RD +KFPDMVHA KP+P++++  + R  DFFSH PE+    + L+ + G P  YR M+G+GV+ Y L+N  G+ HYVKFHWK   G+K L   E  +V   ++SH T DL  +I  G++P+W LY+Q++
Sbjct:   88 FTASADISDLSKATVFKS-GEKTPVFVRFSSVVHGNHSPETLRDPHGFATKFYTADGNWDLVGNNFPTFFIRDAIKFPDMVHAFKPDPRTNLDNDSRRFDFFSHVPEATRTLTLLYSNEGTPAGYRFMDGNGVHAYKLVNAKGEVHYVKFHWKSLQGIKNLDPKEVAQVQSKDYSHLTNDLVGAIKKGDFPKWDLYVQVL 286          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_LISIN (Catalase OS=Listeria innocua GN=kat PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.479e-57
Identity = 102/206 (49.51%), Postives = 140/206 (67.96%), Query Frame = 1
Query:    1 ASAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            A A   F     +   T A+FL+  G +T V  RFSTVIH + SPETLRDPRGF+VKFYT EGN+D VGNN PVFF+RD +KFPD++H+LKP+P+++IQ+  R  DFFS  PE+  M  +LF D G P  YR + GS V+ +  IN+ GK  YVK  W P  G+  L  ++A ++     +HA++DLY++I +G+YPEW LY+Q++
Sbjct:   59 AGAHGKFVTKKSMKKYTIANFLQEEGTETEVFARFSTVIHGQHSPETLRDPRGFSVKFYTEEGNYDFVGNNLPVFFIRDAIKFPDVIHSLKPDPRTNIQDGNRYWDFFSLSPEATTMIMYLFSDEGTPASYREIRGSSVHAFKWINEEGKTVYVKLRWVPKAGIVNLSTEQAAQIQAKEFNHASRDLYEAIENGDYPEWDLYVQVL 264          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA2_CAEEL (Catalase-2 OS=Caenorhabditis elegans GN=ctl-1 PE=2 SV=3)

HSP 1 Score: 221.476 bits (563), Expect = 3.295e-57
Identity = 100/206 (48.54%), Postives = 145/206 (70.39%), Query Frame = 1
Query:    1 ASAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            A A  +FEVTHD++    AD     G QTP++VRFSTV  E GS +T+RDPRGF++KFYT EGN+DLVGNN P+FF+RD + FP+ +HALK NP++H+++   + DF+ + PES+H   FL+ D G+P  +R M G G +T+ ++NK G   Y KFH+KP  G K L   +A K+  ++  +A +DL+++I S N+PEWK++IQ+M
Sbjct:   75 AGAHGYFEVTHDITKYCKADMFNKVGKQTPLLVRFSTVAGESGSADTVRDPRGFSLKFYTEEGNWDLVGNNTPIFFIRDAIHFPNFIHALKRNPQTHMRDPNALFDFWMNRPESIHQVMFLYSDRGIPDGFRFMNGYGAHTFKMVNKEGNPIYCKFHFKPAQGSKNLDPTDAGKLASSDPDYAIRDLFNAIESRNFPEWKMFIQVM 280          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_LISMO (Catalase OS=Listeria monocytogenes GN=kat PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 4.304e-57
Identity = 102/206 (49.51%), Postives = 139/206 (67.48%), Query Frame = 1
Query:    1 ASAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            A A   F     +   T A FL+  G +T V  RFSTVIH + SPETLRDPRGF+VKFYT EGN+D VGNN PVFF+RD +KFPD++H+LKP+P+++IQ+  R  DFFS  PE+  M  +LF D G P  YR + GS V+ +  IN+ GK  YVK  W P  G+  L  ++A ++     +HA++DLY++I +G+YPEW LY+Q++
Sbjct:   59 AGAHGKFVTKKSMKKYTMAKFLQEEGTETEVFARFSTVIHGQHSPETLRDPRGFSVKFYTEEGNYDFVGNNLPVFFIRDAIKFPDVIHSLKPDPRTNIQDGNRYWDFFSLTPEATTMIMYLFSDEGTPASYREVRGSSVHAFKWINEEGKTVYVKLRWVPKAGIVNLSTEQASQIQAKEFNHASRDLYEAIENGDYPEWDLYVQVL 264          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_CANFA (Catalase OS=Canis familiaris GN=CAT PE=1 SV=3)

HSP 1 Score: 221.09 bits (562), Expect = 4.304e-57
Identity = 102/206 (49.51%), Postives = 144/206 (69.90%), Query Frame = 1
Query:    1 ASAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            A A  +FEVTHD++  + A      G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GN+DLVGNN P+FF+RD + FP  +H+ K NP++H+++   + DF+S  PESLH  SFLF D G+P  +RHM G G +T+ L+N AG+A Y KFH+K   G+K L  ++A ++   +  +  +DL+++IA+GNYP W  YIQ+M
Sbjct:   79 AGAFGYFEVTHDITKYSKAKVFEHIGKRTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDAILFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGIPDGHRHMNGYGSHTFKLVNAAGEAVYCKFHYKTDQGIKNLSVEDAARLSHEDPDYGLRDLFNAIATGNYPSWTFYIQVM 284          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_BOVIN (Catalase OS=Bos taurus GN=CAT PE=1 SV=3)

HSP 1 Score: 220.705 bits (561), Expect = 5.621e-57
Identity = 102/206 (49.51%), Postives = 144/206 (69.90%), Query Frame = 1
Query:    1 ASAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            A A  +FEVTHD++  + A      G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GN+DLVGNN P+FF+RD + FP  +H+ K NP++H+++   + DF+S  PESLH  SFLF D G+P  +RHM G G +T+ L+N  G+A Y KFH+K   G+K L  ++A ++   +  +  +DL+++IA+GNYP W LYIQ+M
Sbjct:   79 AGAFGYFEVTHDITRYSKAKVFEHIGKRTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDALLFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGIPDGHRHMNGYGSHTFKLVNANGEAVYCKFHYKTDQGIKNLSVEDAARLAHEDPDYGLRDLFNAIATGNYPSWTLYIQVM 284          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_BACSU (Vegetative catalase OS=Bacillus subtilis GN=katA PE=1 SV=5)

HSP 1 Score: 220.32 bits (560), Expect = 7.342e-57
Identity = 104/206 (50.49%), Postives = 142/206 (68.93%), Query Frame = 1
Query:    1 ASAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            A A  +FEVT+DV+  T A FL   G +TP+ +RFSTV  E GS +T+RDPRGFAVKFYT EGN+D+VGNN PVFF+RD +KFPD +H  K +PK+H++    + DF+S  PESLH  + L  D G+P   RHM G G +T+   N  G+  ++K+H+K   GVK L  + A K+ G N  + T+DL+++I +G+YP WKLY+QIM
Sbjct:   58 AGAHGYFEVTNDVTKYTKAAFLSEVGKRTPLFIRFSTVAGELGSADTVRDPRGFAVKFYTEEGNYDIVGNNTPVFFIRDAIKFPDFIHTQKRDPKTHLKNPTAVWDFWSLSPESLHQVTILMSDRGIPATLRHMHGFGSHTFKWTNAEGEGVWIKYHFKTEQGVKNLDVNTAAKIAGENPDYHTEDLFNAIENGDYPAWKLYVQIM 263          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_PIG (Catalase OS=Sus scrofa GN=CAT PE=1 SV=4)

HSP 1 Score: 219.935 bits (559), Expect = 9.588e-57
Identity = 101/206 (49.03%), Postives = 144/206 (69.90%), Query Frame = 1
Query:    1 ASAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            A A  +FEVTHD++  + A      G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GN+DLVGNN P+FF+RD + FP  +H+ K NP++H+++   + DF+S  PESLH  SFLF D G+P  +RHM G G +T+ L+N+ G+A Y KFH+K   G+K L  ++A ++   +  +  +DL+++IA+GNYP W  YIQ+M
Sbjct:   79 AGAFGYFEVTHDITRFSKAKVFEHVGKRTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDAILFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGIPDGHRHMNGYGSHTFKLVNEKGEAVYCKFHYKTDQGIKNLSVEDAARLPQEDPDYGIRDLFNAIATGNYPSWTFYIQVM 284          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_RAT (Catalase OS=Rattus norvegicus GN=Cat PE=1 SV=3)

HSP 1 Score: 218.779 bits (556), Expect = 2.136e-56
Identity = 103/206 (50.00%), Postives = 143/206 (69.42%), Query Frame = 1
Query:    1 ASAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            A A  +FEVTHD++  + A      G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GN+DLVGNN P+FF+RD M FP  +H+ K NP++H+++   + DF+S  PESLH  +FLF D G+P  +RHM G G +T+ L+N  G+A Y KFH+K   G+K L  +EA ++   +  +  +DL+++IASGNYP W  YIQ+M
Sbjct:   79 AGAFGYFEVTHDITRYSKAKVFEHIGKRTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDAMLFPSFIHSQKRNPQTHLKDPDMVWDFWSLCPESLHQVTFLFSDRGIPDGHRHMNGYGSHTFKLVNANGEAVYCKFHYKTDQGIKNLPVEEAGRLAQEDPDYGLRDLFNAIASGNYPSWTFYIQVM 284          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_DANRE (Catalase OS=Danio rerio GN=cat PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.136e-56
Identity = 101/206 (49.03%), Postives = 141/206 (68.45%), Query Frame = 1
Query:    1 ASAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            A A  +FEVTHD++  + A      G  TP++VRFSTV  E GSP+T+RDPRGFAVKFYT EGN+DL GNN P FF+RD +  P  +H+ K NP++H+++   + DF+S  PESLH  SFLF D G+P  YRHM G G +T+ L+N  G+  Y KFH+K   G+K +  +EA ++   +  ++ +DLY++IA+GN+P W  YIQ+M
Sbjct:   79 AGAFGYFEVTHDITRYSKAKVFEHVGKTTPIVVRFSTVAGEAGSPDTVRDPRGFAVKFYTDEGNWDLTGNNTPTFFIRDTLLSPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGIPDGYRHMNGYGSHTFKLVNAQGQPVYCKFHYKTNQGIKNIPVEEADRLAATDPDYSIRDLYNAIANGNFPSWTFYIQVM 284          
The following BLAST results are available for this feature:
BLAST of FC868871 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CATB_PSESY1.479e-5750.50Catalase OS=Pseudomonas syringae pv. syringae GN=k... [more]
CATA_LISIN1.479e-5749.51Catalase OS=Listeria innocua GN=kat PE=3 SV=1[more]
CATA2_CAEEL3.295e-5748.54Catalase-2 OS=Caenorhabditis elegans GN=ctl-1 PE=2... [more]
CATA_LISMO4.304e-5749.51Catalase OS=Listeria monocytogenes GN=kat PE=3 SV=... [more]
CATA_CANFA4.304e-5749.51Catalase OS=Canis familiaris GN=CAT PE=1 SV=3[more]
CATA_BOVIN5.621e-5749.51Catalase OS=Bos taurus GN=CAT PE=1 SV=3[more]
CATA_BACSU7.342e-5750.49Vegetative catalase OS=Bacillus subtilis GN=katA P... [more]
CATA_PIG9.588e-5749.03Catalase OS=Sus scrofa GN=CAT PE=1 SV=4[more]
CATA_RAT2.136e-5650.00Catalase OS=Rattus norvegicus GN=Cat PE=1 SV=3[more]
CATA_DANRE2.136e-5649.03Catalase OS=Danio rerio GN=cat PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC31005H02EF AbioticL1 Citrus clementina cDNA clone C31005H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868871 ID=FC868871; Name=FC868871; organism=Citrus clementina; type=EST; length=678bp
GCCAGTGCTAAGGTCTTCTTTGAGGTCACCCATGATGTTTCTAACCTTAC
TTGTGCTGATTTCCTTCGAGCCCCAGGGGTTCAGACGCCTGTCATTGTCC
GCTTCTCCACTGTTATCCATGAGCGTGGCAGCCCTGAAACCCTGAGAGAT
CCTCGAGGATTTGCGGTCAAGTTTTACACCAGAGAGGGTAATTTTGATCT
TGTGGGAAACAATTTCCCCGTCTTTTTTGTCCGTGATGGAATGAAATTCC
CTGACATGGTCCATGCGCTTAAACCTAACCCAAAGTCTCACATCCAAGAG
AACTGGAGGATTGTTGACTTCTTCTCCCATCATCCTGAAAGCTTGCACAT
GTTCTCCTTCTTGTTTGATGATGTGGGTGTCCCACGAGATTACAGGCACA
TGGAAGGATCTGGTGTTAACACTTACATGCTGATCAATAAGGCTGGGAAA
GCACATTATGTGAAATTTCATTGGAAACCCACTTGTGGGGTTAAGTGTTT
ATTGGAAGATGAGGCAATCAAGGTTGGAGGAGCCAACCACAGCCATGCTA
CTCAAGATCTTTATGACTCAATTGCATCTGGAAACTATCCTGAGTGGAAA
CTCTACATCCAGATTATGGATCCCGACCATGAGGACNAATTTGACTTTGA
CCCACTTGATGTAACCAAGACTGGCCTG
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