FC868871

Overview
NameFC868871
Unique NameFC868871
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length678
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_CAVPO (Catalase OS=Cavia porcellus GN=CAT PE=2 SV=4)

HSP 1 Score: 218.779 bits (556), Expect = 2.136e-56
Identity = 102/206 (49.51%), Postives = 143/206 (69.42%), Query Frame = 1
Query:    1 ASAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            A A  +FEVTHD++    A      G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT EG +DLVGNN P+FF+RD + FP  +H+ K NP++H+++   + DF+S  PESLH  SFLF D G+P  +RHM G G +T+ L+N +G+A Y KFH+K   G+K L  ++A ++   +  +  +DL+++IA+GNYP W LYIQ+M
Sbjct:   79 AGAFAYFEVTHDITKYCKAKVFEHIGKKTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEEGIWDLVGNNTPIFFIRDALLFPSFIHSQKRNPQTHLKDPDMMWDFWSLRPESLHQVSFLFSDRGIPDGHRHMNGYGSHTFKLVNGSGEAVYCKFHYKTDQGIKNLSVEDAARLSQEDPDYGLRDLFNAIATGNYPSWTLYIQVM 284          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_CALJA (Catalase OS=Callithrix jacchus GN=CAT PE=2 SV=3)

HSP 1 Score: 217.624 bits (553), Expect = 4.759e-56
Identity = 101/206 (49.03%), Postives = 142/206 (68.93%), Query Frame = 1
Query:    1 ASAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            A A  +FEVTHD++  + A      G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GN+DLVGNN P+FF+RD + FP  +H+ K NP++H++    + DF+S  PESLH  SFLF D G+P  +RHM G G +T+ L+N  G+A Y KFH+K   G+K L  ++A ++   +  +  +DL+++IA+GNYP W  YIQ+M
Sbjct:   79 AGAFGYFEVTHDITKYSKAKVFEHIGKRTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDPLLFPSFIHSQKRNPQTHLKHPDMVWDFWSLRPESLHQVSFLFSDRGIPDGHRHMNGYGSHTFKLVNANGEAVYCKFHYKTDQGIKNLSVEDAARLSQEDPDYGLRDLFNAIATGNYPSWTFYIQVM 284          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_MOUSE (Catalase OS=Mus musculus GN=Cat PE=1 SV=3)

HSP 1 Score: 217.238 bits (552), Expect = 6.215e-56
Identity = 102/206 (49.51%), Postives = 142/206 (68.93%), Query Frame = 1
Query:    1 ASAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            A A  +FEVTHD++  + A      G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GN+DLVGNN P+FF+RD + FP  +H+ K NP++H+++   + DF+S  PESLH  SFLF D G+P  +RHM G G +T+ L+N  G+A Y KFH+K   G+K L   EA ++   +  +  +DL+++IA+GNYP W  YIQ+M
Sbjct:   79 AGAFGYFEVTHDITRYSKAKVFEHIGKRTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDAILFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGIPDGHRHMNGYGSHTFKLVNADGEAVYCKFHYKTDQGIKNLPVGEAGRLAQEDPDYGLRDLFNAIANGNYPSWTFYIQVM 284          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATE_MYCAV (Catalase HPII OS=Mycobacterium avium GN=katE PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.385e-55
Identity = 105/211 (49.76%), Postives = 144/211 (68.25%), Query Frame = 1
Query:    1 ASAKVFFEVTHD-VSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQE----NWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            A A  +FE   D ++  T A FL +PG +TPV VRFSTV   RGS +T+RD RGFA KFYT +GN+DLVGNNFPVFF++DG+KFP +VHA+KP P + I +    +  + DF S  PE+LH   +L  D  +PR YR M+G GV+T+ L+N  G+  +VKFHWKP  GV  L+ DE  K+ G +  +  +DL+++I SG YPEW+L +Q++
Sbjct:   81 AGAYGYFEPYDDRLAQYTAAKFLTSPGTRTPVFVRFSTVAGSRGSADTVRDVRGFATKFYTEQGNYDLVGNNFPVFFIQDGIKFPVLVHAVKPEPHNEIPQAQSAHDTLWDFVSLQPETLHAIMWLMSDRALPRSYRMMQGFGVHTFRLVNARGRGTFVKFHWKPRLGVHSLIWDECQKIAGKDPDYNRRDLWEAIESGQYPEWELGVQLV 291          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATE_BACPF (Catalase (Fragment) OS=Bacillus pseudofirmus GN=katE PE=3 SV=2)

HSP 1 Score: 216.083 bits (549), Expect = 1.385e-55
Identity = 102/204 (50.00%), Postives = 141/204 (69.12%), Query Frame = 1
Query:   19 FEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQE----NWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            F+V   +   T A FL+ P V+TPV VRFSTV   +GS ET+RD RGFA KFYT EGN+DLVGNN PVFF++D +KFPD+VHALKP P + I +    +    DF +++ ES HM  +   D  +PR +R MEG GV+T+  +N+ GKAH+VKFHWKP  G+  L+ DEA K+ G +     +DL++SI +G+YPE++L +Q++
Sbjct:   85 FQVYDSMKEFTKAKFLQDPSVKTPVFVRFSTVAGSKGSAETVRDARGFATKFYTEEGNYDLVGNNIPVFFIQDAIKFPDLVHALKPEPHNEIPQAQSAHDTFWDFIANNQESAHMVMWAMSDRSIPRSFRMMEGFGVHTFRFVNEEGKAHFVKFHWKPVLGIHSLVWDEAQKIAGKDPDFHRRDLWESIENGDYPEYELGVQLI 288          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_HUMAN (Catalase OS=Homo sapiens GN=CAT PE=1 SV=3)

HSP 1 Score: 215.698 bits (548), Expect = 1.808e-55
Identity = 100/206 (48.54%), Postives = 142/206 (68.93%), Query Frame = 1
Query:    1 ASAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            A A  +FEVTHD++  + A      G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GN+DLVGNN P+FF+RD + FP  +H+ K NP++H+++   + DF+S  PESLH  SFLF D G+P  +RHM G G +T+ L+N  G+A Y KFH+K   G+K L  ++A ++   +  +  +DL+++IA+G YP W  YIQ+M
Sbjct:   79 AGAFGYFEVTHDITKYSKAKVFEHIGKKTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDPILFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGIPDGHRHMNGYGSHTFKLVNANGEAVYCKFHYKTDQGIKNLSVEDAARLSQEDPDYGIRDLFNAIATGKYPSWTFYIQVM 284          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_ASCSU (Catalase OS=Ascaris suum GN=CAT PE=2 SV=2)

HSP 1 Score: 215.698 bits (548), Expect = 1.808e-55
Identity = 102/201 (50.75%), Postives = 137/201 (68.16%), Query Frame = 1
Query:   16 FFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            FFEVT D++    AD     G +TP+ +RFSTV  E GS +T RDPRGFA+KFYT EGN+DLVGNN P+FF+RD + FP+ +H  K NP +H+++   + DFFS  PE+ H    LF D G+P  +RHM+G G +T+ L+NK G A Y KFH K   G++ L  D AIK+ G +  ++ +DLYDSI +GNYP W+L IQ+M
Sbjct:   83 FFEVTDDITKYCKADVFSTIGKRTPIFIRFSTVGGELGSADTQRDPRGFAIKFYTEEGNWDLVGNNTPIFFIRDPIFFPNFIHTQKRNPVTHLKDPNMMWDFFSLRPETTHQVMILFGDRGIPDGFRHMDGFGSHTFKLVNKDGNAVYCKFHIKTAQGIRNLPPDVAIKLAGEDPDYSIRDLYDSIENGNYPVWRLMIQVM 283          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_RANRU (Catalase OS=Rana rugosa GN=cat PE=2 SV=3)

HSP 1 Score: 214.927 bits (546), Expect = 3.084e-55
Identity = 100/206 (48.54%), Postives = 139/206 (67.48%), Query Frame = 1
Query:    1 ASAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            A A  +FEVTHD++  + A      G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GN+DL GNN P+FFVRD M FP  +H+ K NP++H+++   + DF++  PESLH  SFLF D G+P  +RHM G G +T+ L+N   +  Y KFH+K   G++ L  +EA ++   +  +   DLY++IA+GNYP W  YIQ+M
Sbjct:   79 AGAFGYFEVTHDITRYSKAKVFEFIGKRTPIAVRFSTVAGEAGSADTVRDPRGFAVKFYTEDGNWDLTGNNTPIFFVRDAMLFPSFIHSQKRNPQTHMKDPDMVWDFWALRPESLHQVSFLFSDRGIPDGHRHMNGYGSHTFKLVNAKDEPIYCKFHFKTDQGIRNLTVEEANRLSAEDPDYGIHDLYEAIANGNYPSWTFYIQVM 284          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_ONCVE (Catalase OS=Onchocerca volvulus endobacterium GN=cat PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 5.261e-55
Identity = 103/218 (47.25%), Postives = 142/218 (65.14%), Query Frame = 1
Query:   19 FEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIMXXXXXXXXXXXXXXVTKT 672
            F VT D++  T A    + G QTP  +RFSTV  ERGS +T RDPRGFA+KFYT EGN+D+VGNN PVFF+RD +KFPD +H  K  P+S+++    + DF+SH PE+LH  + LF D G+P  YRHM G G +TY LIN  G+ H+VK+H+K   G+K L   +A ++ G +  +A +DL+ +I  G++P+W++ IQIM              VTKT
Sbjct:   65 FTVTQDITQYTSAKLFDSVGKQTPTFLRFSTVGGERGSADTERDPRGFALKFYTEEGNWDIVGNNTPVFFIRDPLKFPDFIHTQKRLPQSNLKSAQMMWDFWSHSPEALHQVTILFSDRGIPDGYRHMHGFGSHTYSLINAKGERHWVKWHYKTKQGIKNLAPADAARLAGTDPDYAQRDLFGAIERGDFPKWRVCIQIMTEAQANAHYENPFDVTKT 282          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_PONAB (Catalase OS=Pongo abelii GN=CAT PE=2 SV=3)

HSP 1 Score: 213.001 bits (541), Expect = 1.172e-54
Identity = 99/206 (48.06%), Postives = 141/206 (68.45%), Query Frame = 1
Query:    1 ASAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            A A  +FEVTHD++  + A      G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GN+DLVGNN P+FF+RD + FP  +H+ K NP++H+++   + DF+S  PESLH  SFLF D G+P  +RHM G G +T+ L+N  G+A Y KFH+K   G+K L  ++A ++   +  +  +DL+++IA+  YP W  YIQ+M
Sbjct:   79 AGAFGYFEVTHDITKYSKAKVFEHIGKKTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDPLLFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGIPDGHRHMNGYGSHTFKLVNANGEAVYCKFHYKTDQGIKNLSVEDAARLSQEDPDYGIRDLFNAIATEKYPSWTFYIQVM 284          
The following BLAST results are available for this feature:
BLAST of FC868871 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CATA_CAVPO2.136e-5649.51Catalase OS=Cavia porcellus GN=CAT PE=2 SV=4[more]
CATA_CALJA4.759e-5649.03Catalase OS=Callithrix jacchus GN=CAT PE=2 SV=3[more]
CATA_MOUSE6.215e-5649.51Catalase OS=Mus musculus GN=Cat PE=1 SV=3[more]
CATE_MYCAV1.385e-5549.76Catalase HPII OS=Mycobacterium avium GN=katE PE=3 ... [more]
CATE_BACPF1.385e-5550.00Catalase (Fragment) OS=Bacillus pseudofirmus GN=ka... [more]
CATA_HUMAN1.808e-5548.54Catalase OS=Homo sapiens GN=CAT PE=1 SV=3[more]
CATA_ASCSU1.808e-5550.75Catalase OS=Ascaris suum GN=CAT PE=2 SV=2[more]
CATA_RANRU3.084e-5548.54Catalase OS=Rana rugosa GN=cat PE=2 SV=3[more]
CATA_ONCVE5.261e-5547.25Catalase OS=Onchocerca volvulus endobacterium GN=c... [more]
CATA_PONAB1.172e-5448.06Catalase OS=Pongo abelii GN=CAT PE=2 SV=3[more]

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Properties
Property NameValue
Genbank descriptionC31005H02EF AbioticL1 Citrus clementina cDNA clone C31005H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868871 ID=FC868871; Name=FC868871; organism=Citrus clementina; type=EST; length=678bp
GCCAGTGCTAAGGTCTTCTTTGAGGTCACCCATGATGTTTCTAACCTTAC
TTGTGCTGATTTCCTTCGAGCCCCAGGGGTTCAGACGCCTGTCATTGTCC
GCTTCTCCACTGTTATCCATGAGCGTGGCAGCCCTGAAACCCTGAGAGAT
CCTCGAGGATTTGCGGTCAAGTTTTACACCAGAGAGGGTAATTTTGATCT
TGTGGGAAACAATTTCCCCGTCTTTTTTGTCCGTGATGGAATGAAATTCC
CTGACATGGTCCATGCGCTTAAACCTAACCCAAAGTCTCACATCCAAGAG
AACTGGAGGATTGTTGACTTCTTCTCCCATCATCCTGAAAGCTTGCACAT
GTTCTCCTTCTTGTTTGATGATGTGGGTGTCCCACGAGATTACAGGCACA
TGGAAGGATCTGGTGTTAACACTTACATGCTGATCAATAAGGCTGGGAAA
GCACATTATGTGAAATTTCATTGGAAACCCACTTGTGGGGTTAAGTGTTT
ATTGGAAGATGAGGCAATCAAGGTTGGAGGAGCCAACCACAGCCATGCTA
CTCAAGATCTTTATGACTCAATTGCATCTGGAAACTATCCTGAGTGGAAA
CTCTACATCCAGATTATGGATCCCGACCATGAGGACNAATTTGACTTTGA
CCCACTTGATGTAACCAAGACTGGCCTG
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