FC868871

Overview
NameFC868871
Unique NameFC868871
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length678
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_METBF (Catalase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=kat PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 4.454e-54
Identity = 104/206 (50.49%), Postives = 139/206 (67.48%), Query Frame = 1
Query:    1 ASAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            A A  +FEVT DV+  T A FL   G +T V VRFSTV  E+GS ++ RDPRGFAVKFYT +GN+DLVGNN PVFF+RD +KFPD +H  K NP ++ ++     DF S  PES+H  + LF D G P  YR+M G   +TY   N+ G+  +V++H+K   G+K L  +EA K+GG++  HAT+DLY++I  G+YP W L +QIM
Sbjct:   62 AGAGGYFEVTADVTKYTKAKFLSEIGKRTEVFVRFSTVGGEKGSADSARDPRGFAVKFYTEDGNYDLVGNNTPVFFIRDPLKFPDFIHTQKRNPATNCKDPDMFWDFLSLTPESIHQVTILFSDRGTPATYRNMNGYSSHTYKWYNEKGEYFWVQYHFKTDQGIKNLTLEEAEKIGGSDPDHATRDLYEAIKKGDYPSWTLEMQIM 267          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATE_BACSU (Catalase-2 OS=Bacillus subtilis GN=katE PE=3 SV=2)

HSP 1 Score: 209.534 bits (532), Expect = 1.296e-53
Identity = 100/205 (48.78%), Postives = 140/205 (68.29%), Query Frame = 1
Query:   16 FFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQE----NWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            FF+V   ++  T A FL+ P V+TPV VRFSTV   +GS +T+RD RGFA KFYT EGN+DLVGNN PVFF++D +KFPD+VHA KP P + + +    +    DF +++PES HM  +   D G+PR YR MEG GV+T+  +N+ GKA +VKFHWKP  GV  L+ DEA K+ G +     +DL+++I +G   E++L +Q++
Sbjct:   87 FFQVYEPMTEYTRAKFLQDPSVKTPVFVRFSTVAGSKGSADTVRDARGFATKFYTEEGNYDLVGNNIPVFFIQDAIKFPDLVHAFKPEPHNEMPQAATAHDTFWDFVANNPESAHMVMWTMSDRGIPRSYRMMEGFGVHTFRFVNEQGKARFVKFHWKPVLGVHSLVWDEAQKIAGKDPDFHRRDLWETIENGGKVEYELGVQMI 291          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_STRCO (Catalase OS=Streptomyces coelicolor GN=katA PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.693e-53
Identity = 97/200 (48.50%), Postives = 133/200 (66.50%), Query Frame = 1
Query:   19 FEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            FEVT DVS  T ADFL   G +T V +RFSTV    G  + +RDPRGFA+KFYT EGN+DLVGNN PVFF++D +KFPD +H+ K +P +  QE   + DF++H PE+ H  ++L  D G+P  YRHM+G G +TY   N  G++ +VK+H+K   G++CL  DEA K+ G + +    DL  +I  G YP W L++Q+M
Sbjct:   64 FEVTDDVSGFTHADFLNTVGKRTEVFLRFSTVADSLGGADAVRDPRGFALKFYTEEGNYDLVGNNTPVFFIKDPIKFPDFIHSQKRDPFTGRQEPDNVFDFWAHSPEATHQITWLMGDRGIPASYRHMDGFGSHTYQWTNARGESFFVKYHFKTDQGIRCLTADEAAKLAGEDPTSHQTDLVQAIERGVYPSWTLHVQLM 263          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CAT1_NEUCR (Catalase-1 OS=Neurospora crassa GN=cat-1 PE=1 SV=2)

HSP 1 Score: 209.149 bits (531), Expect = 1.693e-53
Identity = 102/202 (50.50%), Postives = 135/202 (66.83%), Query Frame = 1
Query:   19 FEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQE----NWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQ 612
            F+V    S+LT A  L     +TPV VRFSTV+  RGS +T+RD RGFAVKFYT EGN+DLVGNN PVFF++D +KFPD++HA KP P + + +    +    DF  +H E+ HMF++   D  +PR  R M+G GVNTY LIN  GK H+VKFHW P  GV  L+ DEA+K+ G +     +DL+++I +G YP+WK  IQ
Sbjct:  102 FKVYESASDLTMAPVLTDTSRETPVFVRFSTVLGSRGSADTVRDVRGFAVKFYTEEGNWDLVGNNIPVFFIQDAIKFPDVIHAGKPEPHNEVPQAQSAHNNFWDFQFNHTEATHMFTWAMSDRAIPRSLRMMQGFGVNTYTLINAQGKRHFVKFHWTPELGVHSLVWDEALKLAGQDPDFHRKDLWEAIENGAYPKWKFGIQ 303          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATE_PSEAE (Catalase HPII OS=Pseudomonas aeruginosa GN=katE PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 4.924e-53
Identity = 105/210 (50.00%), Postives = 140/210 (66.67%), Query Frame = 1
Query:    1 ASAKVFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHI----QENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            ++A  +FE   D+S+LT A FL   G +TPV VRFSTV   RGS +T+RD RGFAVKFYT EGNFDLVGNN PVFF++D +KFPD VHA+KP P + I      +    DF S  PES HM  +L  D  +P  YR+M+G GV+T+ L+N AG++  VKFHW+P  G   L+ DEA K+ G +     + L++ I  G+YPEW+L +Q++
Sbjct:   94 SAAHGYFEAYEDLSDLTKAGFLAEAGKRTPVFVRFSTVQGPRGSADTVRDVRGFAVKFYTDEGNFDLVGNNMPVFFIQDAIKFPDFVHAVKPEPHNEIPTGASAHDTFWDFVSLTPESAHMVMWLMSDRAIPIAYRNMQGFGVHTFRLVNAAGESVLVKFHWRPKSGTCSLVWDEAQKLAGKDPDFNRRTLWEDIEKGDYPEWELGLQVI 303          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_ASPFU (Catalase A OS=Aspergillus fumigatus GN=catA PE=3 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 1.097e-52
Identity = 100/204 (49.02%), Postives = 134/204 (65.69%), Query Frame = 1
Query:   19 FEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQE----NWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            F++   + +LT A  L      TPV VRFSTV   RGS +T+RD RGFAVKFYT EGN+D+VGNN PVFF++D +KFPD VHA+KP P + + +    +    DF   HPE+ HMF +   D  +PR YR M+G GVNT+ L+NK GK H+VKFHW P  GV  L+ DEA+K+GG +     +DL ++I +  YP+W   IQ++
Sbjct:  103 FKLKESIEDLTYAGVLTDTSRNTPVFVRFSTVQGSRGSADTVRDVRGFAVKFYTDEGNWDIVGNNIPVFFIQDAVKFPDFVHAVKPEPHNEVPQAQTAHNNFWDFVYLHPEATHMFMWAMSDRAIPRSYRMMQGFGVNTFALVNKEGKRHFVKFHWIPHLGVHSLVWDEALKLGGQDPDFHRKDLMEAIDNKAYPKWDFAIQVI 306          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATE_PSEPU (Catalase HPII OS=Pseudomonas putida GN=katE PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.433e-52
Identity = 107/205 (52.20%), Postives = 137/205 (66.83%), Query Frame = 1
Query:   16 FFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHI----QENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            +F+   + ++LT A FL+ P   TPV VRFSTV   RGS +T+RD RGFAVKFYT EGNFDLVGNN PVFF++D +KFPD VHA+KP P + I      +    DF S  PES HM  +   D  +PR  R MEG GV+T+ LIN  G A +VKFHWKP  GV  LL DEA K+ G +     +DL+++I +G+YPEW+L +QI+
Sbjct:  101 YFQSYGNHADLTKAGFLQDPDKITPVFVRFSTVQGPRGSGDTVRDVRGFAVKFYTDEGNFDLVGNNMPVFFIQDAIKFPDFVHAVKPEPHNEIPTGGSAHDTFWDFVSLVPESAHMVMWAMSDRAIPRSLRMMEGFGVHTFRLINAEGVASFVKFHWKPRQGVHSLLWDEAQKLAGKDTDFQRRDLWEAIENGDYPEWELGVQIV 305          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_PSEPU (Catalase OS=Pseudomonas putida GN=katA PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.433e-52
Identity = 101/218 (46.33%), Postives = 137/218 (62.84%), Query Frame = 1
Query:   19 FEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIMXXXXXXXXXXXXXXVTKT 672
            F VT D++  T A      G QT   +RFSTV  ERGS +T RDPRGFAVKFYT EGN+D+VGNN PVFF+RD +KFPD +H  K +P+S+++      D +SH PE+LH  + LF D G+P  YRHM G G +TY LIN  G+  +VK+H+K   G+K L   +A ++ G +  +A +DL+++I  G+YP W + IQ+M              VTKT
Sbjct:   63 FTVTRDITGYTSAKLFEQVGKQTETFLRFSTVGGERGSADTERDPRGFAVKFYTEEGNWDIVGNNTPVFFIRDPLKFPDFIHTQKRHPQSNLKNAQIFWDSWSHSPEALHQVTILFSDRGIPDGYRHMHGFGSHTYSLINAQGERTWVKWHFKTQQGIKNLAPADAARLAGTDPDYAQRDLFEAIERGDYPRWTVCIQVMSEAEAASRDENPFDVTKT 280          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_BORPE (Catalase OS=Bordetella pertussis GN=katA PE=1 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 9.287e-52
Identity = 95/200 (47.50%), Postives = 131/200 (65.50%), Query Frame = 1
Query:   19 FEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            F VTHD+S  T A      G QTP+ +RFSTV  ERG+ +  RD RGFA+KFYT EGN+DLVGNN PVFF+RD +KFPD +H  K +PK++++      DF+S +PESLH  + L  D G+P++YR   G G +TY  +N AG+  YVKFH+K   G+ C  + EA ++ G +   A +DL+ +I  G +P W L +Q+M
Sbjct:   67 FTVTHDISRYTRARIFAEVGKQTPLFLRFSTVAGERGAADAERDVRGFAIKFYTDEGNWDLVGNNTPVFFIRDPLKFPDFIHTQKRDPKTNLRNATAAWDFWSLNPESLHQVTILMSDRGLPQNYRQQHGFGSHTYSFVNDAGERFYVKFHFKSQQGIACYTDGEAAELVGRDRESAQRDLFQNIEQGQFPRWTLKVQVM 266          
BLAST of FC868871 vs. ExPASy Swiss-Prot
Match: CATA_BORPA (Catalase OS=Bordetella parapertussis GN=katA PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 9.287e-52
Identity = 95/200 (47.50%), Postives = 131/200 (65.50%), Query Frame = 1
Query:   19 FEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIM 618
            F VTHD+S  T A      G QTP+ +RFSTV  ERG+ +  RD RGFA+KFYT EGN+DLVGNN PVFF+RD +KFPD +H  K +PK++++      DF+S +PESLH  + L  D G+P++YR   G G +TY  +N AG+  YVKFH+K   G+ C  + EA ++ G +   A +DL+ +I  G +P W L +Q+M
Sbjct:   67 FTVTHDISRYTRARIFAEVGKQTPLFLRFSTVAGERGAADAERDVRGFAIKFYTDEGNWDLVGNNTPVFFIRDPLKFPDFIHTQKRDPKTNLRNATAAWDFWSLNPESLHQVTILMSDRGLPQNYRQQHGFGSHTYSFVNDAGERFYVKFHFKSQQGIACYTDGEAAELVGRDRESAQRDLFQNIEQGQFPRWTLKVQVM 266          
The following BLAST results are available for this feature:
BLAST of FC868871 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CATA_METBF4.454e-5450.49Catalase OS=Methanosarcina barkeri (strain Fusaro ... [more]
CATE_BACSU1.296e-5348.78Catalase-2 OS=Bacillus subtilis GN=katE PE=3 SV=2[more]
CATA_STRCO1.693e-5348.50Catalase OS=Streptomyces coelicolor GN=katA PE=3 S... [more]
CAT1_NEUCR1.693e-5350.50Catalase-1 OS=Neurospora crassa GN=cat-1 PE=1 SV=2[more]
CATE_PSEAE4.924e-5350.00Catalase HPII OS=Pseudomonas aeruginosa GN=katE PE... [more]
CATA_ASPFU1.097e-5249.02Catalase A OS=Aspergillus fumigatus GN=catA PE=3 S... [more]
CATE_PSEPU1.433e-5252.20Catalase HPII OS=Pseudomonas putida GN=katE PE=3 S... [more]
CATA_PSEPU1.433e-5246.33Catalase OS=Pseudomonas putida GN=katA PE=3 SV=1[more]
CATA_BORPE9.287e-5247.50Catalase OS=Bordetella pertussis GN=katA PE=1 SV=1[more]
CATA_BORPA9.287e-5247.50Catalase OS=Bordetella parapertussis GN=katA PE=3 ... [more]

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Properties
Property NameValue
Genbank descriptionC31005H02EF AbioticL1 Citrus clementina cDNA clone C31005H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868871 ID=FC868871; Name=FC868871; organism=Citrus clementina; type=EST; length=678bp
GCCAGTGCTAAGGTCTTCTTTGAGGTCACCCATGATGTTTCTAACCTTAC
TTGTGCTGATTTCCTTCGAGCCCCAGGGGTTCAGACGCCTGTCATTGTCC
GCTTCTCCACTGTTATCCATGAGCGTGGCAGCCCTGAAACCCTGAGAGAT
CCTCGAGGATTTGCGGTCAAGTTTTACACCAGAGAGGGTAATTTTGATCT
TGTGGGAAACAATTTCCCCGTCTTTTTTGTCCGTGATGGAATGAAATTCC
CTGACATGGTCCATGCGCTTAAACCTAACCCAAAGTCTCACATCCAAGAG
AACTGGAGGATTGTTGACTTCTTCTCCCATCATCCTGAAAGCTTGCACAT
GTTCTCCTTCTTGTTTGATGATGTGGGTGTCCCACGAGATTACAGGCACA
TGGAAGGATCTGGTGTTAACACTTACATGCTGATCAATAAGGCTGGGAAA
GCACATTATGTGAAATTTCATTGGAAACCCACTTGTGGGGTTAAGTGTTT
ATTGGAAGATGAGGCAATCAAGGTTGGAGGAGCCAACCACAGCCATGCTA
CTCAAGATCTTTATGACTCAATTGCATCTGGAAACTATCCTGAGTGGAAA
CTCTACATCCAGATTATGGATCCCGACCATGAGGACNAATTTGACTTTGA
CCCACTTGATGTAACCAAGACTGGCCTG
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